Motif J3_95208.1 Version J3_95208.1 of this group appears in releases 3.91 to 3.94
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 1-12 | 2-7 | 3-4 | 5-6 | 8-11 | 9-10 | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J3_8C3A_037 | 8C3A | 0.0000 | 1 | CM | SSU rRNA | U | 1064 | U | 1065 | A | 1066 | C | 1067 | G | 1068 | * | C | 1075 | A | 1076 | A | 1077 | G | 1079 | * | C | 1022 | U | 1023 | A | 1024 | cWW | tWW | ncSW | cWW | tWW | cWW |
| 2 | J3_8P9A_075 | 8P9A | 0.1135 | 1 | sR | SSU rRNA | U | 1079 | U | 1080 | A | 1081 | C | 1082 | G | 1083 | * | C | 1090 | A | 1091 | A | 1092 | G | 1094 | * | C | 1037 | U | 1038 | A | 1039 | cWW | tWW | cSH | cWW | tWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUA*UUACG*CAAAG | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U*UAC*AAA | 2 |
- Annotations
-
- (2)
- Basepair signature
- cWW-tWW-tWW-F-cWW-F-cWW
- Heat map statistics
- Min 0.11 | Avg 0.06 | Max 0.11
Coloring options: