#SLoop idPDBDisc#Non-coreChain(s)Standardized name 1 2 3 4 5 6 7break 8 9break 10 11 121-122-65-95-107-87-119-10
1 J3_5TBW_0145TBW0.000021 LSU rRNAA2930C2931U2932A2933A2934U2935A2936*U2886C2889*G2914U2915U2916cWWtWWncSstSscWWcHWcWW
2 J3_8C3A_0118C3A0.082521 LSU rRNAA2902C2903U2904A2905A2906U2907A2908*U2858C2861*G2886U2887U2888cWWtWWcSstSscWWcHWcWW

3D structures

Complete motif including flanking bases
SequenceCounts
UAUC*GUU*ACUAAUA2
Non-Watson-Crick part of the motif
SequenceCounts
AU*U*CUAAU2

Release history

Release3.803.813.823.833.843.853.863.873.883.89
Date2024-01-312024-02-282024-03-272024-04-242024-05-222024-06-192024-07-172024-08-142024-09-112024-10-09
StatusNew id, 1 parentExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact matchExact match

Parent motifs

This motif has no parent motifs.

Children motifs

This motif has no children motifs.
Annotations
  • (2)
  • Basepair signature
    cWW-tWW-cHW-tSH-cWW-tSS-F-cSS-cWW
    Heat map statistics
    Min 0.08 | Avg 0.04 | Max 0.08
    Help

    Coloring options:

    Copyright 2025 BGSU RNA group. Page generated in 0.1407 s