Motif J4_47842.1 Version J4_47842.1 of this group appears in releases 3.94 to 4.0
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | break | 8 | 9 | 10 | 11 | break | 12 | 13 | 14 | 15 | 16 | 1-16 | 3-7 | 4-9 | 5-6 | 7-8 | 10-13 | 11-12 | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_8KEB_001 | 8KEB | 0.0000 | 0 | A | RNA (72-MER) | A | 9 | U | 10 | A | 11 | U | 12 | C | 13 | * | G | 33 | G | 34 | * | C | 40 | A | 41 | U | 42 | A | 43 | * | U | 59 | U | 60 | A | 61 | C | 62 | U | 63 | cWW | tWS | cWH | cWW | cWW | cWw | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAUC*GG*CAUA*UUACU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAU**AU*UAC | 1 |
Release history
| Release | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 |
|---|---|---|---|---|---|---|---|
| Date | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-F-F-tWS-F-cWH-cWW-cWW-cWW-cWW
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: