Motif J4_63658.1 Version J4_63658.1 of this group appears in releases 3.95 to 3.99
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | break | 4 | 5 | break | 6 | 7 | 8 | 9 | 10 | 11 | 12 | 13 | 14 | 15 | break | 16 | 17 | 18 | 19 | 20 | 1-18 | 1-20 | 2-19 | 3-4 | 5-6 | 7-11 | 12-13 | 13-18 | 14-17 | 15-16 | 18-20 | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J4_8CRE_007 | 8CRE | 0.0000 | 1 | 1 | LSU rRNA | C | 2170 | U | 2171 | G | 2172 | * | C | 2226 | G | 2227 | * | C | 2245 | U | 2246 | U | 2247 | A | 2248 | A | 2249 | G | 2250 | G | 2251 | U | 2252 | A | 2253 | G | 2254 | * | U | 2288 | G | 2289 | A | 2290 | A | 2291 | G | 2293 | tsS | cWW | cWH | cWW | cWW | tSW | cSH | tWH | tHS | cWW | cSs |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUG*CG*CUUAAGGUAG*UGAAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| U**UUAAGGUA*GAAU | 1 |
- Annotations
-
- (1)
- Basepair signature
- cWW-tSS-cSS-cWH-cWW-tWH-tHS-cWW-cWW-tSW-F-cSH-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: