Motif J5_22280.1 Version J5_22280.1 of this group appears in releases 3.70 to 3.98
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | break | 5 | 6 | break | 7 | 8 | 9 | break | 10 | 11 | 12 | break | 13 | 14 | 1-14 | 2-10 | 4-5 | 6-7 | 8-11 | 9-10 | 12-13 | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J5_3RG5_002 | 3RG5 | 0.0000 | 0 | B | Selenocysteine transfer RNA | G | 7 | A | 8 | U | 9 | C | 10 | * | G | 25 | U | 26 | * | A | 44 | G | 45 | C | 46 | * | G | 47|||L | A | 48 | G | 50 | * | C | 64 | C | 66 | cWW | ntSs | cWW | cWW | cWW | cWW | cWW |
| 2 | J5_8G9Z_001 | 8G9Z | 0.2942 | 0 | E | Selenocysteine transfer RNA | G | 7||A | A | 8||A | U | 9||A | C | 10||A | * | G | 25||A | U | 26||A | * | A | 44||A | G | 45||A | C | 46||A | * | G | 47||A|L | A | 48||A | G | 50||A | * | C | 64||A | C | 66||A | cWW | ntSs | cWW | cWW | cWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| GAUC*GU*AGC*GAG*CC | 2 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| AU**G*A* | 2 |
Release history
| Release | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 | 3.78 | 3.79 | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 | 3.91 | 3.92 | 3.93 | 3.94 | 3.95 | 3.96 | 3.97 | 3.98 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2023-04-26 | 2023-05-24 | 2023-06-21 | 2023-07-19 | 2023-08-16 | 2023-09-13 | 2023-10-11 | 2023-11-08 | 2023-12-06 | 2024-01-03 | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 | 2024-12-04 | 2025-01-01 | 2025-01-29 | 2025-02-26 | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-F-cWW-F-cWW-cWW-cWW-cWW
- Heat map statistics
- Min 0.29 | Avg 0.15 | Max 0.29
Coloring options: