Motif J5_50410.1 Version J5_50410.1 of this group appears in releases 3.95 to 4.6
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | break | 10 | 11 | 12 | 13 | 14 | 15 | 16 | 17 | 18 | break | 19 | 20 | break | 21 | 22 | 23 | break | 24 | 25 | 26 | 27 | 28 | 1-28 | 2-26 | 2-27 | 3-26 | 5-18 | 8-12 | 9-10 | 18-19 | 20-21 | 23-24 | ||||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | J5_8CRE_024 | 8CRE | 0.0000 | 9 | CM | SSU rRNA | A | 124 | U | 125 | A | 126 | G | 127 | A | 129 | C | 130 | C | 131 | A | 137 | U | 140 | * | A | 171 | U | 172 | G | 173 | C | 174 | U | 175 | A | 177 | A | 178 | A | 179 | A | 180 | * | U | 201 | G | 202 | * | C | 261 | G | 262 | A | 263 | * | U | 287 | G | 288 | G | 289 | U | 290 | U | 291 | cWW | ncWWa | cwW | tHS | tWW | tWS | cWW | ncWW | cWW | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AUAGUACCUUACUACUU*AUGCUUAAAA*UG*CGA*UGGUU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAGUACCUUACUACU*UGCUUAAA**G*GGU | 1 |
Release history
| Release | 3.95 | 3.96 | 3.97 | 3.98 | 3.99 | 4.0 | 4.1 | 4.2 | 4.3 | 4.4 | 4.5 | 4.6 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2025-03-26 | 2025-04-23 | 2025-05-21 | 2025-06-18 | 2025-07-16 | 2025-08-13 | 2025-09-10 | 2025-10-08 | 2025-11-05 | 2025-12-03 | 2025-12-31 | 2026-01-28 |
| Status | New id, no parents | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (1)
- Basepair signature
- cWW-cWW-tHS-F-F-tWW-cWW-F-F-F-tWS-cWW-cWW-cWW-F-F-F-F-F-F
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: