HL_00194.1	HL_1S72_013		
HL_00238.1	HL_2ZJR_050		
HL_00293.1	HL_2ZJR_038		
HL_00293.1	HL_3O58_017		
HL_00293.1	HL_3OIN_001		
HL_00570.1	HL_2NR0_008		
HL_00692.1	HL_3O30_011		
HL_00692.1	HL_3O58_052		
HL_01504.1	HL_2NR0_005		
HL_01672.1	HL_1S72_063		
HL_01672.1	HL_2QBG_063		
HL_01672.1	HL_2ZJR_059		
HL_01672.1	HL_3PYO_030		
HL_01672.1	HL_3PYO_061		
HL_02975.2	HL_1S72_052		
HL_02975.2	HL_2QBG_052		
HL_02975.2	HL_2ZJR_049		
HL_02975.2	HL_3O58_051		
HL_02975.2	HL_3PYO_051		
HL_03228.1	HL_3O58_023		
HL_03429.2	HL_1S72_003		
HL_03429.2	HL_2QBG_005		
HL_03429.2	HL_2ZJR_003		
HL_03429.2	HL_2ZNI_004		
HL_03429.2	HL_3PYO_003		
HL_03576.1	HL_1FJG_014		
HL_03576.1	HL_1L2X_001		
HL_03576.1	HL_2AW7_014		
HL_03576.1	HL_2XZM_033		
HL_03576.1	HL_2A43_001	GNRA-like with tWH	
HL_04298.1	HL_3O58_034		
HL_04325.1	HL_2QBG_003		
HL_04325.1	HL_2XD0_001		
HL_04325.1	HL_3O58_075		
HL_04630.1	HL_3DIR_003		
HL_05139.1	HL_1J2B_001		
HL_05139.1	HL_3O30_002		
HL_05228.1	HL_2VPL_001		
HL_05272.1	HL_3KFU_002		
HL_05272.1	HL_3KFU_008		
HL_05272.1	HL_3KFU_011		
HL_05272.1	HL_3KFU_005	tRNA anticodon loop with synthetase	
HL_05510.1	HL_2ZJR_020		
HL_05510.1	HL_2ZJR_053		
HL_05993.1	HL_1GAX_003		
HL_05993.1	HL_1J2B_004		
HL_05993.1	HL_1O0C_003		
HL_05993.1	HL_1S72_010		
HL_05993.1	HL_1S72_034		
HL_05993.1	HL_1WZ2_004		
HL_05993.1	HL_2AKE_003		
HL_05993.1	HL_2AZX_003		
HL_05993.1	HL_2CV1_003		
HL_05993.1	HL_2CV1_006		
HL_05993.1	HL_2D6F_003		
HL_05993.1	HL_2DER_003		
HL_05993.1	HL_2DR8_001		
HL_05993.1	HL_2DU6_003		
HL_05993.1	HL_2FK6_002		
HL_05993.1	HL_2NQP_004		
HL_05993.1	HL_2NR0_004		
HL_05993.1	HL_2NR0_007		
HL_05993.1	HL_2NR0_010		
HL_05993.1	HL_2NR0_013		
HL_05993.1	HL_2NRE_003		
HL_05993.1	HL_2QBG_011		
HL_05993.1	HL_2QBG_019		
HL_05993.1	HL_2QBG_034		
HL_05993.1	HL_2ZJR_009		
HL_05993.1	HL_2ZJR_032		
HL_05993.1	HL_2ZM5_003		
HL_05993.1	HL_2ZNI_006		
HL_05993.1	HL_2ZZN_003		
HL_05993.1	HL_3A2K_003		
HL_05993.1	HL_3A2K_006		
HL_05993.1	HL_3A3A_004		
HL_05993.1	HL_3ADC_004		
HL_05993.1	HL_3ADC_008		
HL_05993.1	HL_3ADD_008		
HL_05993.1	HL_3DHS_002		
HL_05993.1	HL_3EPH_006		
HL_05993.1	HL_3F4G_001		
HL_05993.1	HL_3F4G_004		
HL_05993.1	HL_3G78_001		
HL_05993.1	HL_3ICQ_002		
HL_05993.1	HL_3L0U_003		
HL_05993.1	HL_3O58_005		
HL_05993.1	HL_3O58_014		
HL_05993.1	HL_3O58_031		
HL_05993.1	HL_3OUY_001		
HL_05993.1	HL_3OVA_001		
HL_05993.1	HL_3PYO_010		
HL_05993.1	HL_3PYO_032		
HL_05993.1	HL_3Q1Q_011		
HL_05993.1	HL_1GAX_006	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_1J1U_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_1J2B_002	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_1QU2_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_1U0B_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_1WZ2_008	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2A64_002	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2AZX_006	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2BTE_004	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2BTE_008	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2CSX_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2D6F_006	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2DER_006	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2DU3_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2ZNI_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2ZUE_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2ZZM_004	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_2ZZN_006	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_3ADD_004	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_3AL0_003	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_3AM1_004	T-loop with 2 stacked bulged bases	
HL_05993.1	HL_3ICQ_005	T-loop with 2 stacked bulged bases	
HL_06089.1	HL_3PYO_045		
HL_06247.1	HL_1MJI_001		
HL_06247.1	HL_1MJI_002		
HL_06247.1	HL_1S72_071		
HL_06247.1	HL_2QBG_001		
HL_06247.1	HL_3PYO_070		
HL_06261.1	HL_1S72_030		
HL_06261.1	HL_2IL9_006		
HL_06261.1	HL_2QBG_030		
HL_06261.1	HL_2ZJR_055		
HL_06375.1	HL_2NQP_001		
HL_06375.1	HL_2NR0_001		
HL_06375.1	HL_2NR0_011		
HL_06375.1	HL_2NRE_001		
HL_06440.1	HL_1FJG_017		
HL_06440.1	HL_2AW7_015		
HL_06440.1	HL_2XZM_019		
HL_06440.1	HL_2XZM_021		
HL_06440.1	HL_3O30_020		
HL_06440.1	HL_3O30_022		
HL_06440.1	HL_3O30_023		
HL_06440.1	HL_3O30_031		
HL_06589.1	HL_3O30_033		
HL_07042.1	HL_1S72_011		
HL_07042.1	HL_2QBG_012		
HL_07042.1	HL_2ZJR_010		
HL_07042.1	HL_3O58_077		
HL_07042.1	HL_3PYO_011		
HL_07320.2	HL_1S72_016		
HL_07320.2	HL_2QBG_022		
HL_07320.2	HL_3O30_008		
HL_07320.2	HL_3O58_011		
HL_07320.2	HL_3O58_042		
HL_07320.2	HL_3PYO_021		
HL_07320.2	HL_3PYO_038		
HL_08706.1	HL_2XZM_003		
HL_08706.1	HL_1U9S_001	GNRA	
HL_10523.1	HL_3O58_040		
HL_10842.1	HL_2QBG_018		
HL_11061.2	HL_2NZ4_002		
HL_11061.2	HL_2NZ4_006		
HL_11061.2	HL_2NZ4_010		
HL_11061.2	HL_2NZ4_014		
HL_12139.1	HL_3PYO_050		
HL_12242.1	HL_3O58_018		
HL_12468.1	HL_3O58_006		
HL_12532.1	HL_3O58_054		
HL_12650.1	HL_1EC6_002		
HL_12679.1	HL_3IVN_003		
HL_12679.1	HL_3IVN_006		
HL_12880.1	HL_2AW7_012		
HL_12880.1	HL_3O30_030		
HL_13651.1	HL_1F1T_001		
HL_13651.1	HL_2QBZ_002		
HL_13707.1	HL_1GID_002		
HL_13707.1	HL_1GID_005		
HL_13798.1	HL_2ZJR_036		
HL_13798.1	HL_3PYO_036		
HL_14467.1	HL_3PYO_052		
HL_14885.1	HL_2QBG_007		
HL_15569.1	HL_3O30_018		
HL_16981.1	HL_2ZNI_005		
HL_17243.1	HL_1Y26_003		
HL_17243.1	HL_3FO4_003		
HL_17243.1	HL_3LA5_003		
HL_17468.1	HL_1S72_007		
HL_17951.1	HL_3ADC_007		
HL_18082.1	HL_1S72_029		
HL_18082.1	HL_1S72_046		
HL_18082.1	HL_2QBG_029		
HL_18082.1	HL_2QBG_046		
HL_18082.1	HL_2ZJR_027		
HL_18082.1	HL_2ZJR_044		
HL_18082.1	HL_3IVK_002		
HL_18082.1	HL_3IVK_007		
HL_18082.1	HL_3PYO_028		
HL_18082.1	HL_3PYO_044		
HL_18213.1	HL_2DER_002		
HL_18213.1	HL_2DER_005		
HL_18213.1	HL_3O58_063		
HL_18288.1	HL_2ZM5_002		
HL_18399.1	HL_1S72_051		
HL_18399.1	HL_2ZJR_048		
HL_18399.1	HL_3PYO_049		
HL_18943.1	HL_2QBG_002		
HL_18943.1	HL_2XZM_013		
HL_18943.1	HL_3OWZ_004		
HL_19221.1	HL_2A64_001		
HL_19221.1	HL_3DHS_001		
HL_19399.1	HL_2QWY_001		
HL_19399.1	HL_2QWY_002		
HL_20010.1	HL_1U63_001		
HL_20010.1	HL_1U63_002		
HL_20010.1	HL_6MSF_002	Mini UNCG	
HL_20143.1	HL_2QBG_056		
HL_20252.1	HL_1QU2_001	tRNA D-loop	
HL_20316.1	HL_1ET4_001		
HL_20764.1	HL_1JBS_001		
HL_20764.1	HL_1JBS_002		
HL_20764.1	HL_2QUW_003		
HL_20764.1	HL_2ZZN_001		
HL_20764.1	HL_2ZZN_004	tRNA D-loop	
HL_20766.1	HL_1S72_037		
HL_20766.1	HL_2QBG_037		
HL_20766.1	HL_3O58_035		
HL_20766.1	HL_3PYO_035		
HL_20806.1	HL_2QBG_038		
HL_20914.1	HL_2XZM_018		
HL_22654.1	HL_1FJG_001		
HL_22654.1	HL_2AW7_001		
HL_22654.1	HL_2XZM_001		
HL_22654.1	HL_3O30_001		
HL_22711.1	HL_1FJG_023		
HL_22719.1	HL_3EPH_004		
HL_22746.1	HL_2D6F_001		
HL_22931.1	HL_1Y0Q_005		
HL_23141.1	HL_3O58_029		
HL_24282.1	HL_2ZZN_005		
HL_24473.2	HL_1WZ2_001		
HL_24473.2	HL_1WZ2_005	tRNA D-loop	
HL_24473.2	HL_2ZZM_001	tRNA D-loop	
HL_24618.1	HL_3GCA_001		
HL_24707.1	HL_2AKE_001		
HL_25195.1	HL_2HO7_002		
HL_25197.1	HL_2ANN_001		
HL_25798.1	HL_2XZM_007		
HL_25798.1	HL_2ZNI_001		
HL_26075.2	HL_1M5O_001		
HL_26075.2	HL_1M5O_003		
HL_26075.2	HL_1URN_002		
HL_26075.2	HL_2NZ4_009		
HL_26075.2	HL_3ADD_003		
HL_26075.2	HL_3CUN_002		
HL_26075.2	HL_3MUR_002		
HL_26075.2	HL_3P49_001		
HL_26075.2	HL_1U6B_003	U1 small nuclear ribonucleoprotein A binding hairpin	
HL_26075.2	HL_2NZ4_005	U1 small nuclear ribonucleoprotein A binding hairpin	
HL_26579.1	HL_2ZZN_002		
HL_27215.1	HL_2ZJR_026		
HL_27215.1	HL_3PYO_007		
HL_27237.1	HL_3O58_078		
HL_27429.1	HL_2QBG_014		
HL_27429.1	HL_2ZJR_012		
HL_27429.1	HL_3PYO_013		
HL_27541.1	HL_3PYO_019		
HL_29052.1	HL_3NKB_001	Pseudoknot	
HL_29369.2	HL_2QBG_004		
HL_29369.2	HL_3DIR_002		
HL_29369.2	HL_3PYO_002		
HL_29369.2	HL_1F27_001	Pseudoknot geometry	
HL_29369.2	HL_3D0U_002	Pseudoknot geometry	
HL_29382.1	HL_1FJG_025		
HL_29382.1	HL_2AW7_025		
HL_29382.1	HL_2XZM_028		
HL_29382.1	HL_3O30_029		
HL_29382.1	HL_3R4F_001	T-loop related	
HL_29503.1	HL_1Y0Q_006		
HL_29962.1	HL_3O58_072		
HL_30310.1	HL_1FJG_015		
HL_30429.1	HL_2AW7_026		
HL_31251.1	HL_2QBG_043		
HL_31251.1	HL_2XLJ_001		
HL_31251.1	HL_2ZJR_046		
HL_31251.1	HL_1XJR_001	GNRA	
HL_31251.1	HL_3D0U_003	GNRA	
HL_31541.1	HL_1WZ2_002		
HL_31541.1	HL_2QBG_015		
HL_31541.1	HL_2ZJR_013		
HL_31541.1	HL_3PYO_014		
HL_31541.1	HL_1WZ2_006	Pseudoknot geometry	
HL_31697.1	HL_1VBY_001		
HL_31697.1	HL_3PYO_009		
HL_32112.1	HL_2A64_005		
HL_32112.1	HL_3DHS_004		
HL_32133.1	HL_3A2K_001		
HL_32133.1	HL_3A2K_004		
HL_32133.1	HL_2AZX_004	tRNA D-loop	
HL_32133.1	HL_3AL0_001	tRNA D-loop	
HL_32207.1	HL_1FJG_002		
HL_32207.1	HL_1S72_055		
HL_32207.1	HL_2A64_006		
HL_32207.1	HL_2GDI_001		
HL_32207.1	HL_2GDI_003		
HL_32207.1	HL_2QBG_055		
HL_32207.1	HL_2QBG_064		
HL_32207.1	HL_2XZM_029		
HL_32207.1	HL_2ZJR_051		
HL_32207.1	HL_2ZJR_060		
HL_32207.1	HL_3O58_055		
HL_32207.1	HL_3O58_064		
HL_32207.1	HL_3PYO_053		
HL_32207.1	HL_3PYO_062		
HL_32207.1	HL_3R4F_002		
HL_32280.1	HL_2QBG_061		
HL_32280.1	HL_2ZJR_057		
HL_32280.1	HL_3IVK_001		
HL_32280.1	HL_3IVK_006		
HL_32280.1	HL_3PYO_059		
HL_32622.1	HL_3O58_020		
HL_33524.1	HL_1EIY_003		
HL_33640.1	HL_1S72_002		
HL_35330.1	HL_3PYO_055		
HL_35758.1	HL_3O30_019		
HL_36211.1	HL_3FO4_001		
HL_36252.1	HL_1EIY_001		
HL_36725.1	HL_1S72_041		
HL_36725.1	HL_2AW7_002		
HL_36725.1	HL_2QBG_045		
HL_36725.1	HL_2F8K_001	Mini UNCG	
HL_37522.1	HL_3O58_037		
HL_37768.1	HL_3PYO_037		
HL_38130.2	HL_1XPE_001		
HL_38130.2	HL_1XPE_002		
HL_38138.1	HL_1I9V_001		
HL_38227.2	HL_2PJP_001		
HL_38227.2	HL_2PLY_001		
HL_38227.2	HL_2PLY_002		
HL_38227.2	HL_3O58_045		
HL_38429.1	HL_2XZM_022		
HL_40792.1	HL_3A3A_001		
HL_40792.1	HL_3ADC_001		
HL_40792.1	HL_3ADC_005		
HL_40792.1	HL_3ADD_005		
HL_40792.1	HL_3ADD_001	tRNA D-loop	
HL_40792.1	HL_3AM1_001	tRNA D-loop	
HL_40866.1	HL_3EPH_005		
HL_41117.1	HL_1S72_024		
HL_41117.1	HL_2QBG_024		
HL_41117.1	HL_2ZJR_022		
HL_41117.1	HL_3PYO_023		
HL_41237.2	HL_1S72_006		
HL_41237.2	HL_2QBG_008		
HL_41237.2	HL_2QBG_009		
HL_41237.2	HL_2ZJR_006		
HL_41237.2	HL_3O58_001		
HL_41237.2	HL_3PYO_006		
HL_41493.1	HL_2QBG_053		
HL_42077.1	HL_1S72_019		
HL_42077.1	HL_2QBG_020		
HL_42437.1	HL_3O30_013		
HL_42580.1	HL_2ZZM_002		
HL_42580.1	HL_361D_002		
HL_42580.1	HL_3O30_006		
HL_42658.1	HL_2ZUE_002		
HL_42687.1	HL_1GID_003		
HL_42687.1	HL_1GID_006		
HL_42687.1	HL_361D_001		
HL_42687.1	HL_3O58_027		
HL_42884.1	HL_2AW7_018		
HL_42884.1	HL_3O58_004		
HL_43598.1	HL_1H4S_001	tRNA D-loop	
HL_43963.1	HL_2AW7_017		
HL_43963.1	HL_3O30_016		
HL_44444.1	HL_1FJG_018		
HL_44444.1	HL_1GAX_002		
HL_44444.1	HL_1ZBH_001	Mini UNCG	
HL_44662.1	HL_2CZJ_001		
HL_44662.1	HL_2CZJ_005		
HL_44662.1	HL_2XZM_026		
HL_44662.1	HL_3P49_004		
HL_45018.1	HL_1Y26_001		
HL_45018.1	HL_3IVN_001		
HL_45018.1	HL_3LA5_001		
HL_45746.1	HL_2W2H_001		
HL_45746.1	HL_2W2H_002		
HL_46794.1	HL_1Y0Q_008		
HL_46794.1	HL_2XZM_014		
HL_46794.1	HL_3O58_028		
HL_47025.1	HL_1FJG_013		
HL_47025.1	HL_1S72_022		
HL_47025.1	HL_1S72_036		
HL_47025.1	HL_1S72_045		
HL_47025.1	HL_2AW7_013		
HL_47025.1	HL_2XZM_009		
HL_47025.1	HL_2XZM_024		
HL_47025.1	HL_2XZM_034		
HL_47025.1	HL_2XZM_035		
HL_47025.1	HL_2ZJR_004		
HL_47025.1	HL_2ZJR_034		
HL_47025.1	HL_3O30_003		
HL_47025.1	HL_3O30_036		
HL_47025.1	HL_3O58_002		
HL_47025.1	HL_3O58_012		
HL_47025.1	HL_3O58_013		
HL_47025.1	HL_3O58_019		
HL_47025.1	HL_3O58_025		
HL_47025.1	HL_3O58_036		
HL_47025.1	HL_3O58_039		
HL_47025.1	HL_3O58_047		
HL_47025.1	HL_3Q1Q_002		
HL_47025.1	HL_3Q1Q_010		
HL_47025.1	HL_1U6B_004	GNRA variation	
HL_47025.1	HL_3AM1_002	GNRA variation	
HL_47364.1	HL_1LNG_001		
HL_47364.1	HL_2BH2_001		
HL_47364.1	HL_2BH2_002		
HL_47810.1	HL_1S72_043		
HL_48274.1	HL_3IVK_010		
HL_48274.1	HL_3IVK_005	T-loop related	
HL_48426.1	HL_1S03_001		
HL_48480.1	HL_2CSX_002		
HL_49035.1	HL_3ADD_007		
HL_49169.1	HL_1JBR_002		
HL_49169.1	HL_3A2K_002		
HL_49169.1	HL_3A2K_005		
HL_49433.1	HL_1GAX_001		
HL_49433.1	HL_2AZX_001		
HL_49433.1	HL_2FK6_001		
HL_49433.1	HL_3L0U_001		
HL_49433.1	HL_1GAX_004	tRNA D-loop	
HL_49433.1	HL_2ZUE_001	tRNA D-loop	
HL_50137.1	HL_1U0B_002	tRNA anticodon loop	
HL_51930.1	HL_1S72_001		
HL_52064.1	HL_2QBG_068		
HL_52890.2	HL_2ZM5_001		
HL_52890.2	HL_1J1U_001	tRNA D-loop	
HL_52890.2	HL_3EPH_001	tRNA D-loop	
HL_52999.1	HL_1ET4_002		
HL_52999.1	HL_1ET4_003		
HL_52999.1	HL_1ET4_004		
HL_52999.1	HL_1ET4_005		
HL_53789.1	HL_2B63_002		
HL_54040.1	HL_3O58_049		
HL_54261.1	HL_1S72_069		
HL_54261.1	HL_2QBG_070		
HL_54261.1	HL_2ZJR_066		
HL_54261.1	HL_3O58_071		
HL_54261.1	HL_3PYO_068		
HL_54304.1	HL_1S72_014		
HL_54401.1	HL_1KOG_001		
HL_54401.1	HL_1KOG_002		
HL_54401.1	HL_1KOG_003		
HL_54401.1	HL_1KOG_004		
HL_54401.1	HL_1KOG_005		
HL_54401.1	HL_1KOG_006		
HL_54401.1	HL_1KOG_007		
HL_54401.1	HL_1KOG_008		
HL_54834.1	HL_1O0C_002		
HL_54834.1	HL_1S72_032		
HL_54834.1	HL_1S72_049		
HL_55171.1	HL_1FJG_004		
HL_55171.1	HL_1H4S_002	tRNA anticodon loop with synthetase	
HL_55766.1	HL_2ZJR_011		
HL_56663.1	HL_2A64_003		
HL_57217.1	HL_2QUW_001		
HL_57387.1	HL_1OOA_001		
HL_57387.1	HL_1OOA_002		
HL_57387.1	HL_2QBG_032		
HL_57387.1	HL_3O58_008		
HL_57777.1	HL_1ZBH_002		
HL_57777.1	HL_3EPH_002		
HL_57904.1	HL_1QU2_002		
HL_57904.1	HL_2XZM_017		
HL_58083.2	HL_1U0B_001		
HL_58083.2	HL_2DU3_001		
HL_58083.2	HL_2DU6_001		
HL_58311.1	HL_2ZJR_001		
HL_58311.1	HL_3PYO_001		
HL_58556.1	HL_3O58_059		
HL_58751.2	HL_1FJG_005		
HL_58751.2	HL_1ZSE_001		
HL_58751.2	HL_2B2D_001		
HL_58751.2	HL_2OZB_001		
HL_58751.2	HL_2QBG_041		
HL_58751.2	HL_2ZJR_039		
HL_58751.2	HL_3PYO_039		
HL_58751.2	HL_6MSF_001	Mini UNCG	
HL_59610.1	HL_1GAX_005		
HL_60345.1	HL_1S72_025		
HL_60345.1	HL_3DH3_004		
HL_60345.1	HL_3DH3_006		
HL_60345.1	HL_3DH3_001	UNCG	
HL_60345.1	HL_3DH3_003	UNCG	
HL_61040.1	HL_3O58_024		
HL_61061.1	HL_2ZJR_045		
HL_62044.1	HL_2JLT_001		
HL_62044.1	HL_3B31_001		
HL_62044.1	HL_2ZNI_002	tRNA anticodon loop	
HL_62578.1	HL_1S72_068		
HL_62578.1	HL_2ZJR_064		
HL_62578.1	HL_3O58_068		
HL_62578.1	HL_3PYO_066		
HL_62590.1	HL_1O0C_001		
HL_63690.1	HL_2XZM_002		
HL_65376.1	HL_2DU3_002		
HL_65376.1	HL_2DU6_002		
HL_65802.1	HL_1S72_059		
HL_65924.1	HL_1FJG_008		
HL_65924.1	HL_2AW7_008		
HL_65994.1	HL_1S72_047		
HL_65994.1	HL_2QBG_047		
HL_65994.1	HL_3O58_046		
HL_66291.1	HL_1X8W_002		
HL_66795.1	HL_1WZ2_003		
HL_66795.1	HL_1WZ2_007		
HL_66795.1	HL_2OEU_002		
HL_68221.1	HL_1S72_039		
HL_68221.1	HL_2XZM_006		
HL_68221.1	HL_2ZJR_017		
HL_68221.1	HL_3DIR_004		
HL_68221.1	HL_3OUY_002		
HL_68221.1	HL_3PYO_018		
HL_69082.1	HL_1FJG_003		
HL_69082.1	HL_1FJG_007		
HL_69082.1	HL_1FJG_010		
HL_69082.1	HL_1FJG_016		
HL_69082.1	HL_1FJG_019		
HL_69082.1	HL_1FJG_020		
HL_69082.1	HL_1FJG_022		
HL_69082.1	HL_1FJG_024		
HL_69082.1	HL_1FJG_027		
HL_69082.1	HL_1FJG_028		
HL_69082.1	HL_1FJG_032		
HL_69082.1	HL_1GID_001		
HL_69082.1	HL_1HMH_002		
HL_69082.1	HL_1LNG_002		
HL_69082.1	HL_1M5O_002		
HL_69082.1	HL_1M5O_004		
HL_69082.1	HL_1Q96_002		
HL_69082.1	HL_1Q96_003		
HL_69082.1	HL_1RLG_001		
HL_69082.1	HL_1S72_008		
HL_69082.1	HL_1S72_009		
HL_69082.1	HL_1S72_015		
HL_69082.1	HL_1S72_017		
HL_69082.1	HL_1S72_020		
HL_69082.1	HL_1S72_023		
HL_69082.1	HL_1S72_033		
HL_69082.1	HL_1S72_040		
HL_69082.1	HL_1S72_048		
HL_69082.1	HL_1S72_054		
HL_69082.1	HL_1S72_060		
HL_69082.1	HL_1S72_065		
HL_69082.1	HL_1S72_066		
HL_69082.1	HL_1S72_070		
HL_69082.1	HL_1S72_072		
HL_69082.1	HL_1UN6_002		
HL_69082.1	HL_1X8W_001		
HL_69082.1	HL_1X8W_003		
HL_69082.1	HL_1X8W_005		
HL_69082.1	HL_1Y0Q_001		
HL_69082.1	HL_1Y0Q_003		
HL_69082.1	HL_1Y0Q_004		
HL_69082.1	HL_1Y0Q_007		
HL_69082.1	HL_2AW7_003		
HL_69082.1	HL_2AW7_004		
HL_69082.1	HL_2AW7_007		
HL_69082.1	HL_2AW7_010		
HL_69082.1	HL_2AW7_016		
HL_69082.1	HL_2AW7_019		
HL_69082.1	HL_2AW7_020		
HL_69082.1	HL_2AW7_022		
HL_69082.1	HL_2AW7_024		
HL_69082.1	HL_2AW7_028		
HL_69082.1	HL_2AW7_032		
HL_69082.1	HL_2BTE_007		
HL_69082.1	HL_2EZ6_001		
HL_69082.1	HL_2GIS_002		
HL_69082.1	HL_2GIS_003		
HL_69082.1	HL_2HO7_004		
HL_69082.1	HL_2NZ4_004		
HL_69082.1	HL_2NZ4_012		
HL_69082.1	HL_2NZ4_016		
HL_69082.1	HL_2OIU_002		
HL_69082.1	HL_2OIU_004		
HL_69082.1	HL_2OIU_005		
HL_69082.1	HL_2OIU_006		
HL_69082.1	HL_2PXV_001		
HL_69082.1	HL_2QBG_010		
HL_69082.1	HL_2QBG_016		
HL_69082.1	HL_2QBG_021		
HL_69082.1	HL_2QBG_028		
HL_69082.1	HL_2QBG_033		
HL_69082.1	HL_2QBG_036		
HL_69082.1	HL_2QBG_048		
HL_69082.1	HL_2QBG_049		
HL_69082.1	HL_2QBG_059		
HL_69082.1	HL_2QBG_060		
HL_69082.1	HL_2QBG_065		
HL_69082.1	HL_2QBG_066		
HL_69082.1	HL_2QBG_071		
HL_69082.1	HL_2QBZ_001		
HL_69082.1	HL_2XXA_001		
HL_69082.1	HL_2XXA_002		
HL_69082.1	HL_2XZM_005		
HL_69082.1	HL_2XZM_015		
HL_69082.1	HL_2XZM_020		
HL_69082.1	HL_2XZM_023		
HL_69082.1	HL_2XZM_027		
HL_69082.1	HL_2XZM_031		
HL_69082.1	HL_2ZJR_005		
HL_69082.1	HL_2ZJR_008		
HL_69082.1	HL_2ZJR_014		
HL_69082.1	HL_2ZJR_015		
HL_69082.1	HL_2ZJR_019		
HL_69082.1	HL_2ZJR_031		
HL_69082.1	HL_2ZJR_047		
HL_69082.1	HL_2ZJR_056		
HL_69082.1	HL_2ZJR_061		
HL_69082.1	HL_2ZJR_062		
HL_69082.1	HL_2ZJR_067		
HL_69082.1	HL_2ZJR_069		
HL_69082.1	HL_3A3A_003		
HL_69082.1	HL_3ADC_003		
HL_69082.1	HL_3CUN_001		
HL_69082.1	HL_3DVZ_001		
HL_69082.1	HL_3G78_003		
HL_69082.1	HL_3G78_006		
HL_69082.1	HL_3IAB_001		
HL_69082.1	HL_3MUR_001		
HL_69082.1	HL_3NPB_002		
HL_69082.1	HL_3NPN_001		
HL_69082.1	HL_3O30_014		
HL_69082.1	HL_3O30_021		
HL_69082.1	HL_3O30_024		
HL_69082.1	HL_3O30_025		
HL_69082.1	HL_3O30_028		
HL_69082.1	HL_3O30_032		
HL_69082.1	HL_3O58_003		
HL_69082.1	HL_3O58_010		
HL_69082.1	HL_3O58_016		
HL_69082.1	HL_3O58_030		
HL_69082.1	HL_3O58_033		
HL_69082.1	HL_3O58_048		
HL_69082.1	HL_3O58_060		
HL_69082.1	HL_3O58_065		
HL_69082.1	HL_3O58_066		
HL_69082.1	HL_3O58_074		
HL_69082.1	HL_3P22_003		
HL_69082.1	HL_3P22_005		
HL_69082.1	HL_3P22_007		
HL_69082.1	HL_3PYO_008		
HL_69082.1	HL_3PYO_015		
HL_69082.1	HL_3PYO_016		
HL_69082.1	HL_3PYO_017		
HL_69082.1	HL_3PYO_020		
HL_69082.1	HL_3PYO_031		
HL_69082.1	HL_3PYO_034		
HL_69082.1	HL_3PYO_046		
HL_69082.1	HL_3PYO_047		
HL_69082.1	HL_3PYO_058		
HL_69082.1	HL_3PYO_063		
HL_69082.1	HL_3PYO_064		
HL_69082.1	HL_3PYO_069		
HL_69082.1	HL_3PYO_071		
HL_69082.1	HL_3Q1Q_001		
HL_69082.1	HL_3Q1Q_003		
HL_69082.1	HL_3Q1Q_004		
HL_69082.1	HL_3Q1Q_006		
HL_69082.1	HL_3Q1Q_008		
HL_69082.1	HL_488D_001		
HL_69082.1	HL_488D_002		
HL_69082.1	HL_1G1X_001	GNRA	
HL_69082.1	HL_1G1X_003	GNRA	
HL_69082.1	HL_1GID_004	GNRA	
HL_69082.1	HL_1HMH_001	GNRA	
HL_69082.1	HL_1HMH_003	GNRA	
HL_69082.1	HL_1KH6_002	GNRA	
HL_69082.1	HL_1KXK_001	GNRA	
HL_69082.1	HL_1MFQ_002	GNRA	
HL_69082.1	HL_1MZP_001	GNRA	
HL_69082.1	HL_1NBS_007	GNRA	
HL_69082.1	HL_1Q96_001	GNRA	
HL_69082.1	HL_1RLG_002	GNRA	
HL_69082.1	HL_1U6B_001	GNRA	
HL_69082.1	HL_1U9S_002	GNRA	
HL_69082.1	HL_1U9S_004	GNRA	
HL_69082.1	HL_1UN6_004	GNRA	
HL_69082.1	HL_2BTE_003	GNRA	
HL_69082.1	HL_2EZ6_002	GNRA	
HL_69082.1	HL_2IL9_003	GNRA	
HL_69082.1	HL_2NZ4_008	GNRA	
HL_69082.1	HL_2OIU_001	GNRA	
HL_69082.1	HL_2OIU_003	GNRA	
HL_69082.1	HL_2ZZM_003	GNRA	
HL_69082.1	HL_3AM1_003	GNRA	
HL_69082.1	HL_3D0U_004	GNRA	
HL_69082.1	HL_3E5C_001	GNRA	
HL_69082.1	HL_3E5C_002	GNRA	
HL_69082.1	HL_3IWN_001	GNRA	
HL_69082.1	HL_3KTW_002	GNRA	
HL_69082.1	HL_3MOJ_001	GNRA	
HL_69082.1	HL_3NKB_002	GNRA	
HL_69082.1	HL_3P22_001	GNRA	
HL_69082.1	HL_1JID_001	GNRA variation	
HL_69082.1	HL_1MFQ_001	GNRA variation	
HL_69367.1	HL_3G78_009		
HL_69367.1	HL_3IVK_008		
HL_69367.1	HL_3IVK_003	Fab BL3-6 binding hairpin with tSW	
HL_69451.1	HL_1S72_026		
HL_69451.1	HL_2QBG_026		
HL_69451.1	HL_2ZJR_024		
HL_69451.1	HL_3O58_022		
HL_69451.1	HL_3PYO_025		
HL_70011.1	HL_387D_001		
HL_70246.1	HL_1S72_012		
HL_70246.1	HL_2QBG_013		
HL_70246.1	HL_3F4G_002		
HL_70246.1	HL_3F4G_005		
HL_70246.1	HL_3O58_007		
HL_70246.1	HL_3PYO_012		
HL_70609.1	HL_2CV1_001		
HL_70609.1	HL_2CV1_004		
HL_72210.1	HL_3PYO_065		
HL_72657.1	HL_1F7Y_001		
HL_72657.1	HL_1F7Y_002		
HL_72657.1	HL_1FJG_009		
HL_72657.1	HL_1FJG_011		
HL_72657.1	HL_1FJG_026		
HL_72657.1	HL_1FJG_031		
HL_72657.1	HL_1I6U_002		
HL_72657.1	HL_1S72_005		
HL_72657.1	HL_1S72_044		
HL_72657.1	HL_1UN6_001		
HL_72657.1	HL_1YKV_001		
HL_72657.1	HL_1YKV_002		
HL_72657.1	HL_2AW7_005		
HL_72657.1	HL_2AW7_009		
HL_72657.1	HL_2AW7_011		
HL_72657.1	HL_2AW7_031		
HL_72657.1	HL_2QBG_006		
HL_72657.1	HL_2QBG_040		
HL_72657.1	HL_2QBG_044		
HL_72657.1	HL_2XZM_011		
HL_72657.1	HL_2ZJR_042		
HL_72657.1	HL_3G78_008		
HL_72657.1	HL_3O30_005		
HL_72657.1	HL_3O58_043		
HL_72657.1	HL_3PYO_042		
HL_72657.1	HL_1I6U_001	UNCG	
HL_72657.1	HL_1NBS_006	UNCG	
HL_72657.1	HL_1UN6_003	UNCG	
HL_72657.1	HL_2HW8_001	UNCG	
HL_72964.1	HL_2XZM_010		
HL_72964.1	HL_3O30_009		
HL_73827.1	HL_2QWY_003		
HL_75141.1	HL_3O58_069		
HL_75196.1	HL_1FJG_021		
HL_75196.1	HL_2AW7_021		
HL_75196.1	HL_3O30_026		
HL_75914.1	HL_2XZM_016		
HL_75914.1	HL_3A3A_002		
HL_76027.1	HL_3G78_004		
HL_76807.1	HL_1A9N_001		
HL_76807.1	HL_1A9N_002		
HL_77305.1	HL_1NBS_001		
HL_77305.1	HL_1NBS_004		
HL_77557.1	HL_2ZJR_035		
HL_77557.1	HL_3P49_002		
HL_77652.1	HL_2ZJR_002		
HL_77652.1	HL_3DHS_005		
HL_77652.1	HL_3PYO_067		
HL_77783.1	HL_2XZM_025		
HL_77837.1	HL_2ZJR_018		
HL_77837.1	HL_2ZJR_021		
HL_77942.1	HL_2QBG_025		
HL_77942.1	HL_2XZM_004		
HL_77942.1	HL_2ZJR_007		
HL_77942.1	HL_2ZJR_023		
HL_77942.1	HL_3PYO_024		
HL_77981.1	HL_3G78_002		
HL_78191.1	HL_3O58_026		
HL_78507.1	HL_2QBG_054		
HL_78735.2	HL_1FJG_006		
HL_78735.2	HL_1U9S_003		
HL_78735.2	HL_2AW7_006		
HL_78735.2	HL_2GDI_004		
HL_78735.2	HL_2HOJ_002		
HL_78735.2	HL_2XZM_008		
HL_78735.2	HL_3D2V_004		
HL_78735.2	HL_3NPB_003		
HL_78735.2	HL_3O30_007		
HL_78735.2	HL_3Q1Q_005		
HL_78735.2	HL_2GDI_002	Other HL	
HL_78735.2	HL_3D2V_002	T-loop related	
HL_79390.1	HL_2CSX_001	tRNA D-loop	
HL_79880.1	HL_2XZM_030		
HL_79902.1	HL_3HJW_001		
HL_80301.1	HL_2QBG_057		
HL_80301.1	HL_3O58_057		
HL_80492.1	HL_2BTE_005		
HL_80492.1	HL_2BTE_001	tRNA D-loop	
HL_80557.1	HL_1S03_002		
HL_80557.1	HL_3O30_034		
HL_80583.1	HL_1EIY_002		
HL_80583.1	HL_1J2B_003		
HL_80583.1	HL_2AZX_002		
HL_80583.1	HL_2CV1_002		
HL_80583.1	HL_2CV1_005		
HL_80583.1	HL_3ADC_006		
HL_80583.1	HL_3L0U_002		
HL_80583.1	HL_1J1U_002	tRNA anticodon loop	
HL_80583.1	HL_2AKE_002	tRNA anticodon loop	
HL_80583.1	HL_2AZX_005	tRNA anticodon loop	
HL_80822.1	HL_1VFG_001		
HL_80843.1	HL_2NR0_006		
HL_81943.1	HL_1MMS_001		
HL_81943.1	HL_1MMS_003		
HL_81943.1	HL_1MMS_004		
HL_81943.1	HL_1NBS_002		
HL_81943.1	HL_1QA6_001		
HL_81943.1	HL_1QA6_002		
HL_81943.1	HL_1QA6_003		
HL_81943.1	HL_1QA6_004		
HL_81943.1	HL_1S72_031		
HL_81943.1	HL_2QBG_031		
HL_81943.1	HL_2ZJR_028		
HL_81943.1	HL_2ZJR_029		
HL_81943.1	HL_3PYO_022		
HL_81943.1	HL_1E8O_001	GNRA with tandem sheared	
HL_81943.1	HL_1MMS_002	GNRA with tandem sheared	
HL_81949.1	HL_3O30_004		
HL_82371.1	HL_2QBG_023		
HL_82371.1	HL_2QBG_051		
HL_82371.1	HL_3O58_050		
HL_82371.1	HL_3O58_070		
HL_82371.1	HL_3PYO_057		
HL_83043.1	HL_2D6F_004		
HL_83043.1	HL_3IVN_004		
HL_83053.1	HL_1FJG_030		
HL_83094.1	HL_1S72_028		
HL_83277.1	HL_2HO7_003		
HL_83765.2	HL_2D6F_002		
HL_83765.2	HL_3O58_038		
HL_83765.2	HL_3O58_053		
HL_83765.2	HL_2D6F_005	tRNA anticodon loop	
HL_83914.2	HL_1S72_035		
HL_83914.2	HL_2QBG_035		
HL_83914.2	HL_2QBG_039		
HL_83914.2	HL_2ZJR_030		
HL_83914.2	HL_2ZJR_033		
HL_83914.2	HL_2ZJR_037		
HL_83914.2	HL_2ZJR_041		
HL_83914.2	HL_3O58_032		
HL_83914.2	HL_3PYO_033		
HL_83914.2	HL_3PYO_041		
HL_84031.1	HL_1S72_056		
HL_84031.1	HL_2ZJR_052		
HL_84031.1	HL_3O58_056		
HL_84031.1	HL_3PYO_054		
HL_84126.1	HL_3O58_021		
HL_84289.1	HL_3EGZ_001		
HL_84487.1	HL_3D2V_001		
HL_84487.1	HL_3D2V_003		
HL_84888.1	HL_3CUN_003		
HL_85049.2	HL_2ZJR_043		
HL_85049.2	HL_3OWZ_001		
HL_85049.2	HL_1U6B_002	Pseudoknot geometry	
HL_85273.1	HL_3O30_017		
HL_85352.1	HL_1S72_042		
HL_85352.1	HL_2QBG_042		
HL_85352.1	HL_2ZJR_040		
HL_85352.1	HL_3O58_041		
HL_85352.1	HL_3PYO_040		
HL_86123.1	HL_1FJG_029		
HL_86123.1	HL_2AW7_029		
HL_86123.1	HL_3EPH_003	T-loop with 2 stacked bulged bases	
HL_86601.1	HL_2DER_001		
HL_86601.1	HL_2DER_004		
HL_88639.1	HL_1FJG_012		
HL_88639.1	HL_2AW7_027		
HL_88639.1	HL_2QBG_017		
HL_88639.1	HL_3PYO_027		
HL_88639.1	HL_3PYO_043		
HL_88639.1	HL_3KTW_001	GNRA	
HL_88640.1	HL_2OEU_001	Mini UNCG	
HL_88640.1	HL_2QUW_002	Mini UNCG	
HL_88921.1	HL_3G78_007		
HL_89161.1	HL_2IPY_001		
HL_89161.1	HL_2IPY_002		
HL_90365.1	HL_2ZJR_068		
HL_91122.1	HL_1S72_058		
HL_91122.1	HL_1S72_061		
HL_91122.1	HL_1S72_067		
HL_91122.1	HL_2GIS_001		
HL_91122.1	HL_2NR0_003		
HL_91122.1	HL_2NZ4_003		
HL_91122.1	HL_2NZ4_011		
HL_91122.1	HL_2NZ4_015		
HL_91122.1	HL_2QBG_058		
HL_91122.1	HL_2QBG_067		
HL_91122.1	HL_2ZJR_054		
HL_91122.1	HL_2ZJR_063		
HL_91122.1	HL_3G78_005		
HL_91122.1	HL_3IVK_009		
HL_91122.1	HL_3NPB_001		
HL_91122.1	HL_3O58_009		
HL_91122.1	HL_3O58_058		
HL_91122.1	HL_3O58_061		
HL_91122.1	HL_3O58_067		
HL_91122.1	HL_3OWZ_002		
HL_91122.1	HL_3PYO_056		
HL_91122.1	HL_2JLT_002	Pseudoknot geometry	
HL_91122.1	HL_2NZ4_007	Pseudoknot geometry	
HL_91122.1	HL_3IVK_004	Pseudoknot geometry	
HL_91907.1	HL_3AL0_002		
HL_91907.1	HL_3FO4_002		
HL_91907.1	HL_3PYO_005		
HL_91907.1	HL_1Y26_002	Purine riboswitch	
HL_91907.1	HL_3LA5_002	Purine riboswitch	
HL_92124.1	HL_2QBG_050		
HL_92124.1	HL_3PYO_048		
HL_92905.1	HL_1P6V_002		
HL_93206.1	HL_2ZJR_065		
HL_93985.1	HL_3IVN_002		
HL_93985.1	HL_3IVN_005		
HL_93985.1	HL_3O30_027		
HL_94145.1	HL_2AW7_030		
HL_94618.2	HL_1U1Y_001		
HL_94618.2	HL_1U1Y_002		
HL_94618.2	HL_1ZDJ_001		
HL_94618.2	HL_1ZDJ_002		
HL_94618.2	HL_2BQ5_001		
HL_94618.2	HL_2BQ5_002		
HL_94618.2	HL_2C50_001		
HL_94618.2	HL_2C50_002		
HL_94618.2	HL_2IZM_001		
HL_94618.2	HL_2IZM_002		
HL_94618.2	HL_2IZN_001		
HL_94618.2	HL_2IZN_002		
HL_94618.2	HL_2XZM_012		
HL_94618.2	HL_5MSF_001		
HL_94618.2	HL_5MSF_002		
HL_94618.2	HL_7MSF_001		
HL_94618.2	HL_7MSF_002		
HL_95074.2	HL_1P6V_003		
HL_95074.2	HL_2CZJ_003		
HL_95074.2	HL_2ZJR_016		
HL_95074.2	HL_3O58_015		
HL_95074.2	HL_1P6V_001	UNCG variation	
HL_95074.2	HL_2CZJ_007	UNCG variation	
HL_95074.2	HL_2NUE_001	UNCG variation	
HL_95197.1	HL_2XZM_032		
HL_95472.1	HL_3PYO_026		
HL_95727.2	HL_2AW7_023		
HL_95727.2	HL_2QUX_001		
HL_95727.2	HL_2QUX_002		
HL_95727.2	HL_2QUX_003		
HL_95727.2	HL_2QUX_004		
HL_95727.2	HL_2QUX_005		
HL_95727.2	HL_2QUX_006		
HL_95727.2	HL_3O30_010		
HL_96039.1	HL_1S72_062		
HL_96039.1	HL_2QBG_062		
HL_96039.1	HL_2ZJR_058		
HL_96039.1	HL_3O58_062		
HL_96039.1	HL_3PYO_060		
HL_96740.1	HL_3O30_012		
HL_97499.1	HL_2QBG_069		
HL_98456.1	HL_1VBY_002		
HL_98577.1	HL_3D0U_001		
HL_98577.1	HL_3DIR_001		
HL_99458.1	HL_3PYO_004		