Equivalence class DNA_4.0_83312.1 Current
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2XO6|1|B+ 2XO6|1|C (rep) | 5'-D(*TP*TP*GP*AP*TP*G)-3', DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE | synthetic construct | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE | X-ray diffraction | 1.9 | 2010-10-13 | |||
| 2 | 2XO6|1|E+ 2XO6|1|F | 5'-D(*TP*TP*GP*AP*TP*G)-3', DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE | synthetic construct | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE | X-ray diffraction | 1.9 | 2010-10-13 | |||
| 3 | 2XQC|1|B+ 2XQC|1|C | 5'-D(TP*TP*GP*AP*TP*GP)-3', DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE | Deinococcus radiodurans | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE AND ZN | X-ray diffraction | 1.9 | 2010-10-13 | |||
| 4 | 2XQC|1|E+ 2XQC|1|F | 5'-D(TP*TP*GP*AP*TP*GP)-3', DRA2 TRANSPOSASE LEFT END RECOGNITION SEQUENCE | Deinococcus radiodurans | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE AND ZN | X-ray diffraction | 1.9 | 2010-10-13 | |||
| 5 | 2XM3|1|G | DRA2 TRANSPOSASE BINDING ELEMENT | synthetic construct | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-ray diffraction | 2.3 | 2010-10-13 | |||
| 6 | 2XM3|1|I | DRA2 TRANSPOSASE BINDING ELEMENT | synthetic construct | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-ray diffraction | 2.3 | 2010-10-13 | |||
| 7 | 2XM3|1|K | DRA2 TRANSPOSASE BINDING ELEMENT | synthetic construct | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-ray diffraction | 2.3 | 2010-10-13 | |||
| 8 | 2XM3|1|M | DRA2 TRANSPOSASE BINDING ELEMENT | synthetic construct | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-ray diffraction | 2.3 | 2010-10-13 | |||
| 9 | 2XM3|1|O | DRA2 TRANSPOSASE BINDING ELEMENT | synthetic construct | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-ray diffraction | 2.3 | 2010-10-13 | |||
| 10 | 2XM3|1|Q | DRA2 TRANSPOSASE BINDING ELEMENT | synthetic construct | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-ray diffraction | 2.3 | 2010-10-13 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length | NAKB NA annotation | NAKB protein annotation |
|---|---|---|---|---|---|---|---|---|
| 1 | 2XO6|1|B+ 2XO6|1|C | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE | X-RAY DIFFRACTION | 1.9 | 27 | enzyme,recombinase | ||
| 2 | 2XQC|1|B+ 2XQC|1|C | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE AND ZN | X-RAY DIFFRACTION | 1.9 | 27 | enzyme,recombinase | ||
| 3 | 2XM3|1|K | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-RAY DIFFRACTION | 2.3 | 27 | enzyme,recombinase | ||
| 4 | 2XM3|1|G | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-RAY DIFFRACTION | 2.3 | 27 | enzyme,recombinase | ||
| 5 | 2XM3|1|O | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-RAY DIFFRACTION | 2.3 | 27 | enzyme,recombinase | ||
| 6 | 2XM3|1|Q | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-RAY DIFFRACTION | 2.3 | 27 | enzyme,recombinase | ||
| 7 | 2XM3|1|I | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-RAY DIFFRACTION | 2.3 | 27 | enzyme,recombinase | ||
| 8 | 2XM3|1|M | Deinococcus radiodurans ISDra2 Transposase Left end DNA complex | X-RAY DIFFRACTION | 2.3 | 27 | enzyme,recombinase | ||
| 9 | 2XO6|1|E+ 2XO6|1|F | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE Y132F MUTANT COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE | X-RAY DIFFRACTION | 1.9 | 27 | enzyme,recombinase | ||
| 10 | 2XQC|1|E+ 2XQC|1|F | DEINOCOCCUS RADIODURANS ISDRA2 TRANSPOSASE COMPLEXED WITH LEFT END RECOGNITION AND CLEAVAGE SITE AND ZN | X-RAY DIFFRACTION | 1.9 | 27 | enzyme,recombinase |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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