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Equivalence class DNA_4.0_96391.1 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11FQ2|1|A+ 1FQ2|1|B (rep)DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')CRYSTAL STRUCTURE ANALYSIS OF THE POTASSIUM FORM OF B-DNA DODECAMER CGCGAATTCGCGX-ray diffraction1.22000-11-27
21N1O|1|A+ 1N1O|1|B5'-D(*CP*GP*CP*GP*AP*AP*(TFT)P*TP*CP*GP*CP*G)-3'Crystal Structure of a B-form DNA Duplex Containing (L)-alpha-threofuranosyl (3'-2') Nucleosides: A Four-Carbon Sugar is Easily Accommodated into the Backbone of DNAX-ray diffraction1.22002-11-15
31DC0|1|A+ 1DC0|1|BDNA (5'-D(*CP*AP*TP*GP*GP*GP*CP*CP*CP*AP*TP*G)-3')CRYSTAL STRUCTURE OF AN A/B-DNA INTERMEDIATE CATGGGCCCATGX-ray diffraction1.32000-03-06
4423D|1|A+ 423D|1|BDNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3')5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-ray diffraction1.61999-10-14
51DPN|1|A+ 1DPN|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3')B-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINEX-ray diffraction0.952000-04-04
62AC0|1|E+ 2AC0|1|F5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex I)X-ray diffraction1.82006-07-11
72AC0|1|G+ 2AC0|1|H5'-D(*CP*GP*GP*GP*CP*AP*TP*GP*CP*CP*CP*G)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex I)X-ray diffraction1.82006-07-11
8442D|1|A+ 442D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-ray diffraction1.62000-02-02
93FDE|1|C+ 3FDE|1|F5'-D(*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3', 5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'Mouse UHRF1 SRA domain bound with hemi-methylated CpG DNA, crystal structure in space group C222(1) at 1.4 A resolutionX-ray diffraction1.412009-01-06
103FDE|1|D+ 3FDE|1|E5'-D(*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3', 5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'Mouse UHRF1 SRA domain bound with hemi-methylated CpG DNA, crystal structure in space group C222(1) at 1.4 A resolutionX-ray diffraction1.412009-01-06
112FII|1|A+ 2FII|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(UAR)P*CP*GP*CP*G)-3'Crystal Structure Analysis of the B-DNA Dodecamer CGCGAAT-aU-CGCG, with Incorporated Arabino-Uridin (aU)X-ray diffraction1.242006-05-23
123EY3|1|A+ 3EY3|1|B5'-D(*CP*GP*CP*GP*AP*AP*(USM)P*(USM)P*CP*GP*CP*G)-3'A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-ray diffraction1.252009-04-28
133EY3|1|C+ 3EY3|1|D5'-D(*CP*GP*CP*GP*AP*AP*(USM)P*(USM)P*CP*GP*CP*G)-3'A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-ray diffraction1.252009-04-28
142FIH|1|A+ 2FIH|1|B5'-D(*CP*GP*CP*GP*AP*AP*(UAR)P*TP*CP*GP*CP*G)-3'Crystal Structure Analysis of the B-DNA Dodecamer CGCGAA-aU-TCGCG, with Incorporated Arabino-Uridine (aU)X-ray diffraction1.132006-05-23
151EI4|1|A+ 1EI4|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(TLC)P*(TLC)P*CP*GP*CP*G)-3')B-DNA DODECAMER CGCGAAT(TLC)CGCG WITH INCORPORATED [3.3.0]BICYCLO-ARABINO-THYMINE-5'-PHOSPHATEX-ray diffraction1.432000-03-27
162ZKD|1|C+ 2ZKD|1|DDNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DTP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DAP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DAP*DG)-3')Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-ray diffraction1.62008-09-09
172ZKD|1|E+ 2ZKD|1|FDNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DTP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DAP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DAP*DG)-3')Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-ray diffraction1.62008-09-09
182ADY|1|E+ 2ADY|1|F5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex IV)X-ray diffraction2.52006-07-11
193LPV|1|A+ 3LPV|1|B5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'X-ray crystal structure of duplex DNA containing a cisplatin 1,2-d(GpG) intrastrand cross-linkX-ray diffraction1.772010-08-11
203LPV|1|C+ 3LPV|1|D5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'X-ray crystal structure of duplex DNA containing a cisplatin 1,2-d(GpG) intrastrand cross-linkX-ray diffraction1.772010-08-11
21443D|1|A+ 443D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'/ BENZIMIDAZOLE DERIVATIVE COMPLEXX-ray diffraction1.62000-02-02
223GA6|1|D+ 3GA6|1|F5'-D(*GP*CP*CP*CP*TP*GP*UP*GP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*CP*GP*CP*AP*GP*GP*GP*C)-3'Mth0212 in complex with two DNA helicesX-ray diffraction1.8982010-03-09
233GA6|1|G+ 3GA6|1|H5'-D(*GP*CP*CP*CP*TP*GP*UP*GP*CP*AP*GP*C)-3', 5'-D(*GP*CP*TP*GP*CP*GP*CP*AP*GP*GP*GP*C)-3'Mth0212 in complex with two DNA helicesX-ray diffraction1.8982010-03-09
242OFI|1|B+ 2OFI|1|C5'-D(*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*GP*C)-3', 5'-D(*CP*GP*GP*AP*CP*TP*(3DR)P*AP*CP*GP*GP*G)-3'Crystal Structure of 3-methyladenine DNA Glycosylase I (TAG) bound to DNA/3mAX-ray diffraction1.852007-05-15
251N5C|1|A5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDC)P*GP*CP*G)-3'Crystal Structure Analysis of the B-DNA Dodecamer CGCGAATT(ethenoC)GCGX-ray diffraction1.792003-06-03
261R2Z|1|B+ 1R2Z|1|C5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*GP*TP*CP*CP*AP*(DHU)P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg) bound to 5,6-dihydrouracil (DHU) containing DNAX-ray diffraction1.632003-10-14
27477D|1|A+ 477D|1|B5'-D(*GP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'CALCIUM FORM OF THE B-DNA DODECAMER GGCGAATTCGCGX-ray diffraction1.71999-07-19
283M4A|1|D+ 3M4A|1|EDNA (5'-D(*GP*AP*AP*TP*AP*AP*GP*GP*GP*CP*GP*C)-3'), DNA (5'-D(*GP*CP*GP*CP*CP*CP*TP*TP*AP*TP*TP*C)-3')Crystal structure of a bacterial topoisomerase IB in complex with DNA reveals a secondary DNA binding siteX-ray diffraction1.652010-07-14
293F8J|1|F+ 3F8J|1|G5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3'Mouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group C222(1)X-ray diffraction1.992009-01-06
302B3E|1|A+ 2B3E|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of DB819-D(CGCGAATTCGCG)2 complex.X-ray diffraction1.362005-11-22
313EY1|1|B5'-D(*CP*GP*CP*GP*AP*AP*(USM)P*(USM)P*CP*GP*CP*G)-3'A Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-ray diffraction1.62009-04-28
323I8D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(DFT)P*CP*GP*CP*G)-3'The Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray CrystallographyX-ray diffraction1.612009-09-01
333I8D|1|D5'-D(*CP*GP*CP*GP*AP*AP*TP*(DFT)P*CP*GP*CP*G)-3'The Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray CrystallographyX-ray diffraction1.612009-09-01
342E52|1|I+ 2E52|1|JDNA (5'-D(*DGP*DCP*DCP*DAP*DAP*DGP*DCP*DTP*DTP*DGP*DGP*DC)-3')Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA at 2.0 angstrom resolutionX-ray diffraction22007-12-18
351S2R|1|A+ 1S2R|1|B5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3'A High Resolution Crystal Structure of [d(CGCAAATTTGCG)]2X-ray diffraction1.532005-01-04
362AHI|1|E+ 2AHI|1|F5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex III)X-ray diffraction1.852006-07-11
372AHI|1|G+ 2AHI|1|H5'-D(*CP*GP*GP*AP*CP*AP*TP*GP*TP*CP*CP*G)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex III)X-ray diffraction1.852006-07-11
382QEF|1|A+ 2QEF|1|BDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*(ZDU)P*DCP*(7GU)P*DCP*DG)-3')X-ray structure of 7-deaza-dG and Z3dU modified duplex CGCGAATXCZCGX-ray diffraction1.62008-05-06
39455D|1|A+ 455D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*(SSP)AP*TP*TP*CP*GP*CP*G)-3')A6/A18 INTER-STRAND DITHIOBIS(PROPANE)-CROSSLINKED DODECAMER (CGCGAATTCGCG)2X-ray diffraction1.431999-10-08
401VZK|1|A+ 1VZK|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP *CP*G)-3'A Thiophene Based Diamidine Forms a "Super" AT Binding Minor Groove AgentX-ray diffraction1.772004-10-25
413HTS|1|A5'-D(*GP*GP*TP*TP*CP*TP*AP*GP*AP*AP*CP*C)-3'HEAT SHOCK TRANSCRIPTION FACTOR/DNA COMPLEXX-ray diffraction1.751999-04-29
421OE4|1|E+ 1OE4|1|F5'-D(*CP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*G)-3', 5'-D(*CP*GP*GP*AP*CP*TP*3DR*AP*CP*GP*GP*G)-3'Xenopus SMUG1, an anti-mutator uracil-DNA GlycosylaseX-ray diffraction22003-07-11
431Z5T|1|A+ 1Z5T|1|B5'-D(*CP*GP*CP*GP*AP*AP*(ZDU)P*(ZDU)P*CP*GP*CP*G)-3'Crystal Structure of [d(CGCGAA(Z3dU)(Z3dU)CGCG)]2, Z3dU:5-(3-aminopropyl)-2'-deoxyuridine, in presence of thallium I.X-ray diffraction1.62005-07-26
443D0A|1|E+ 3D0A|1|FDNA (5'-D(*DCP*DGP*DGP*DGP*DCP*DAP*DTP*DGP*DCP*DCP*DCP*DG)-3')Human p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNAX-ray diffraction1.82009-01-20
453D0A|1|G+ 3D0A|1|HDNA (5'-D(*DCP*DGP*DGP*DGP*DCP*DAP*DTP*DGP*DCP*DCP*DCP*DG)-3')Human p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNAX-ray diffraction1.82009-01-20
463OIE|1|A+ 3OIE|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of the DB1880-D(CGCGAATTCGCG)2 complexX-ray diffraction1.92011-01-19
473D0P|1|BDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DCP*DG)-3')Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complexX-ray diffraction1.82008-10-07
483D0P|1|DDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*DGP*DCP*DG)-3')Insights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complexX-ray diffraction1.82008-10-07
492ATA|1|E+ 2ATA|1|F5'-D(*AP*AP*GP*GP*CP*AP*TP*GP*CP*CP*TP*T)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex II)X-ray diffraction2.22006-07-11
502ATA|1|G+ 2ATA|1|H5'-D(*AP*AP*GP*GP*CP*AP*TP*GP*CP*CP*TP*T)-3'Structural Basis of DNA Recognition by p53 Tetramers (complex II)X-ray diffraction2.22006-07-11
512A66|1|B+ 2A66|1|C5'-D(*CP*TP*GP*GP*CP*CP*TP*TP*GP*AP*AP*C)-3', 5'-D(*GP*TP*TP*CP*AP*AP*GP*GP*CP*CP*AP*G)-3'Homo sapiensHuman Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 PromoterX-ray diffraction2.22005-12-06
522AOQ|1|B+ 2AOQ|1|C5'-D(*GP*CP*AP*TP*GP*AP*TP*CP*AP*TP*GP*C)-3'Crystal structure of MutH-unmethylated DNA complexX-ray diffraction2.22005-10-11
533A4K|1|M+ 3A4K|1|NDNA (5'-D(*GP*CP*CP*AP*AP*GP*CP*TP*TP*GP*GP*C)-3')Crystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolutionX-ray diffraction2.172009-10-20
542RF3|1|A+ 2RF3|1|B5'-d(CGCG(TCY)ATTCGCG)-3'Crystal Structure of Tricyclo-DNA: An Unusual Compensatory Change of Two Adjacent Backbone Torsion AnglesX-ray diffraction1.752008-02-12
553LWM|1|B+ 3LWM|1|CDNA (5'-D(*GP*AP*CP*CP*AP*CP*GP*GP*CP*GP*CP*(2DA))-3'), DNA (5'-D(*TP*GP*CP*GP*CP*CP*GP*TP*GP*GP*TP*C)-3')Structure of the large fragment of thermus aquaticus DNA polymerase I in complex with a blunt-ended DNA and ddATPX-ray diffraction2.1862010-05-05
563CLZ|1|E+ 3CLZ|1|F5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3', 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3'The set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-ray diffraction2.22008-04-29
573CLZ|1|G+ 3CLZ|1|H5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3', 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3'The set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-ray diffraction2.22008-04-29
583CLZ|1|I+ 3CLZ|1|J5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3', 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3'The set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-ray diffraction2.22008-04-29
593CLZ|1|K+ 3CLZ|1|L5'-D(*DCP*DCP*DCP*DTP*DGP*DCP*DGP*DGP*DGP*DCP*DCP*DC)-3', 5'-D(*DGP*DGP*DGP*DCP*DCP*(5CM)P*DGP*DCP*DAP*DGP*DGP*DG)-3'The set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-ray diffraction2.22008-04-29
601M6F|1|A+ 1M6F|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')Strong Binding in the DNA Minor Groove by an Aromatic Diamidine With a Shape That Does Not Match the Curvature of the GrooveX-ray diffraction1.782002-11-15
613ODH|1|C+ 3ODH|1|DDNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3')Structure of OkrAI/DNA complexX-ray diffraction2.32010-10-06
623ODH|1|G+ 3ODH|1|HDNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3')Structure of OkrAI/DNA complexX-ray diffraction2.32010-10-06
63459D|1|A+ 459D|1|BDNA (5'-D(*CP*GP*(CBR)P*AP*TP*AP*TP*TP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*AP*TP*GP*CP*G)-3')DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUGX-ray diffraction2.31999-06-28
642QEG|1|A+ 2QEG|1|BDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DTP*DCP*(7GU)P*DCP*DG)-3')B-DNA with 7-deaza-dG modificationX-ray diffraction1.62008-05-06
652GVR|1|A+ 2GVR|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of the berenil-D(CGCGAATTCGCG)2 complex at 1.65 A resolution.X-ray diffraction1.652007-06-19
661OE6|1|E+ 1OE6|1|F5'-D(*CP*CP*CP*GP*TP*GP*AP*GP*TP*CP*CP*G)-3', 5'-D(*CP*GP*GP*AP*CP*TP*3DRP*AP*CP*GP*GP*G)-3'Xenopus SMUG1, an anti-mutator uracil-DNA GlycosylaseX-ray diffraction2.652003-07-11
673EXJ|1|D+ 3EXJ|1|C5'-D(*DTP*DTP*DGP*DAP*DGP*DCP*DAP*DTP*DGP*DCP*DTP*DC)-3', 5'-D(P*DGP*DAP*DGP*DCP*DAP*DTP*DGP*DCP*DTP*DCP*DA)-3'Crystal Structure of a p53 Core Tetramer Bound to DNAX-ray diffraction22008-12-16
68428D|1|A+ 428D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURE OF THE POTASSIUM FORM OF CGCGAATTCGCG: DNA DEFORMATION BY ELECTROSTATIC COLLAPSE AROUND SMALL CATIONSX-ray diffraction1.751998-10-09
691ZPI|1|A+ 1ZPI|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure analysis of the minor groove binding quinolinium quaternary salt SN 8224 complexed with CGCGAATTCGCGX-ray diffraction1.62005-10-11
701CW0|1|M+ 1CW0|1|ODNA (5'-D(*AP*CP*GP*TP*AP*CP*CP*TP*GP*GP*CP*T)-3'), DNA (5'-D(P*TP*AP*GP*GP*TP*AP*CP*GP*T)-3')CRYSTAL STRUCTURE ANALYSIS OF VERY SHORT PATCH REPAIR (VSR) ENDONUCLEASE IN COMPLEX WITH A DUPLEX DNAX-ray diffraction2.31999-12-12
712H27|1|B+ 2H27|1|C5'-D(*C*CP*GP*AP*AP*GP*TP*TP*CP*CP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*AP*AP*CP*TP*TP*CP*G)-3'Crystal Structure of Escherichia coli SigmaE Region 4 Bound to its-35 Element DNAX-ray diffraction2.32006-08-22
722H27|1|E+ 2H27|1|F5'-D(*C*CP*GP*AP*AP*GP*TP*TP*CP*CP*GP*G)-3', 5'-D(*CP*CP*CP*GP*GP*AP*AP*CP*TP*TP*CP*G)-3'Crystal Structure of Escherichia coli SigmaE Region 4 Bound to its-35 Element DNAX-ray diffraction2.32006-08-22
732I5A|1|A+ 2I5A|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of a DB1055-D(CGCGAATTCGCG)2 complexX-ray diffraction1.652008-04-08
743EXL|1|D+ 3EXL|1|C5'-D(*DGP*DAP*DGP*DCP*DAP*DTP*DGP*DCP*DTP*DCP*DA)-3', 5'-D(*DTP*DTP*DGP*DAP*DGP*DCP*DAP*DTP*DGP*DCP*DTP*DC)-3'Crystal Structure of a p53 Core Tetramer Bound to DNAX-ray diffraction2.22008-12-16
753CO3|1|A+ 3CO3|1|B5'-D(*DCP*DCP*DTP*DCP*DTP*DCP*DGP*DTP*DCP*DTP*DCP*DC)-3', 5'-D(*DGP*DGP*DAP*DGP*DAP*DCP*DGP*DAP*DGP*DAP*DGP*DG)-3'X-Ray Crystal Structure of a Monofunctional Platinum-DNA Adduct, cis-{Pt(NH3)2(pyridine)}2+ Bound to Deoxyguanosine in a Dodecamer DuplexX-ray diffraction2.162008-06-10
76424D|1|A+ 424D|1|BDNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3')5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-ray diffraction2.71999-10-14
77424D|1|C+ 424D|1|DDNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3')5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-ray diffraction2.71999-10-14
78424D|1|E+ 424D|1|FDNA (5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3')5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-ray diffraction2.71999-10-14
792B0K|1|A+ 2B0K|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of the DB921-D(CGCGAATTCGCG)2 complex.X-ray diffraction1.642005-11-22
803F8I|1|D+ 3F8I|1|E5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3'Mouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group P21X-ray diffraction2.292009-01-06
813F8I|1|F+ 3F8I|1|G5'-D(*DCP*DCP*DAP*DTP*DGP*(5CM)P*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(*DGP*DTP*DCP*DAP*DGP*DCP*DGP*DCP*DAP*DTP*DGP*DG)-3'Mouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group P21X-ray diffraction2.292009-01-06
82448D|1|A+ 448D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-ray diffraction2.22000-02-02
83449D|1|A+ 449D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-ray diffraction2.12000-02-02
841R2Y|1|B+ 1R2Y|1|C5'-D(*AP*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*AP*CP*GP*C)-3', 5'-D(*TP*GP*CP*GP*TP*CP*CP*AP*(8OG)P*GP*TP*CP*TP*AP*CP*C)-3'MutM (Fpg) bound to 8-oxoguanine (oxoG) containing DNAX-ray diffraction2.342003-10-14
85478D|1|A+ 478D|1|B5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'CRYSTAL STRUCTURE OF THE B-DNA DODECAMER 5'-D(CGCGAA(TAF)TCGCG), WHERE TAF IS 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINEX-ray diffraction2.21999-07-19
862I2I|1|A+ 2I2I|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of the DB293-D(CGCGAATTCGCG)2 complex.X-ray diffraction1.632007-07-31
871FYL|1|CHEAD-TO-HEAD HSESERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A HEAD-TO-HEAD ORIENTATIONX-ray diffraction2.12001-09-28
881FYL|1|DHEAD-TO-HEAD HSESERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A HEAD-TO-HEAD ORIENTATIONX-ray diffraction2.12001-09-28
891NGT|1|A+ 1NGT|1|B5'-D(*CP*GP*CP*GP*AP*AP*(MTR)P*TP*CP*GP*CP*G)-3'The Role of Minor Groove Functional Groups in DNA HydrationX-ray diffraction2.042003-03-04
90444D|1|A+ 444D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-ray diffraction2.42000-02-02
91458D|1|A+ 458D|1|BDNA (5'-D(*CP*GP*(CBR)P*AP*TP*AP*TP*TP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*AP*TP*GP*CP*G)-3')DNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG BY A NON-SELF-COMPLEMENTARY AT-RICH SEQUENCEX-ray diffraction2.31999-06-28
921QV8|1|A+ 1QV8|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'B-DNA Dodecamer d(CGCGAATTCGCG)2 complexed with proamineX-ray diffraction2.52004-09-07
931HQ7|1|A+ 1HQ7|1|B5'-D(*GP*CP*AP*AP*AP*CP*GP*TP*TP*TP*GP*C)-3'CRYSTALLOGRAPHIC STUDIES OF A DODECAMER B-DNA D-(GCAAACGTTTGC)2X-ray diffraction2.12003-07-07
942P8D|1|A5'-D(*DCP*DGP*DCP*DGP*DAP*(XAR)P*DTP*DTP*DCP*DGP*DCP*DG)-3'The Structure of the Dickerson Sequence with an Incorporated CeNA ResidueX-ray diffraction1.92008-02-05
952P8D|1|B5'-D(*DCP*DGP*DCP*DGP*DAP*(XAR)P*DTP*DTP*DCP*DGP*DCP*DG)-3'The Structure of the Dickerson Sequence with an Incorporated CeNA ResidueX-ray diffraction1.92008-02-05
962XCT|1|G+ 2XCT|1|F5'-D(AP*GP*CP*CP*GP*TP*AP*G)-3', 5'-D(GP*TP*AP*CP*CP*CP*AP*CP*GP*GP*CP*T)-3'synthetic constructThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-ray diffraction3.352010-08-25
972XCT|1|H+ 2XCT|1|E5'-D(GP*TP*AP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3', 5'-D(TP*GP*TP*GP*CP*GP*GP*T)-3'synthetic constructThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-ray diffraction3.352010-08-25
982XCT|1|X+ 2XCT|1|W5'-D(AP*GP*CP*CP*GP*TP*AP*G)-3', 5'-D(GP*TP*AP*CP*CP*CP*AP*CP*GP*GP*CP*T)-3'synthetic constructThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-ray diffraction3.352010-08-25
992XCT|1|Y+ 2XCT|1|V5'-D(GP*TP*AP*CP*AP*CP*CP*GP*CP*AP*CP*A)-3', 5'-D(TP*GP*TP*GP*CP*GP*GP*T)-3'synthetic constructThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-ray diffraction3.352010-08-25
1002I5W|1|E+ 2I5W|1|F5'-D(*GP*GP*TP*AP*GP*AP*CP*CP*TP*GP*GP*A)-3', 5'-D(P*CP*CP*AP*GP*(G42)P*TP*CP*TP*AP*C)-3'Structure of hOGG1 crosslinked to DNA sampling a normal G adjacent to an oxoGX-ray diffraction2.62006-10-17
1011LRR|1|B+ 1LRR|1|C5'-D(*AP*GP*TP*CP*GP*(6MA)P*TP*CP*GP*GP*TP*G)-3', 5'-D(*CP*AP*CP*CP*GP*AP*TP*CP*GP*AP*CP*T)-3'CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNAX-ray diffraction2.652002-12-11
1021LRR|1|E+ 1LRR|1|F5'-D(*AP*GP*TP*CP*GP*(6MA)P*TP*CP*GP*GP*TP*G)-3', 5'-D(*CP*AP*CP*CP*GP*AP*TP*CP*GP*AP*CP*T)-3'CRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNAX-ray diffraction2.652002-12-11
1032GYX|1|A+ 2GYX|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of DB884- D(CGCGAATTCGCG)2 complex at 1.86 A resolution.X-ray diffraction1.862007-05-22
1042B1D|1|A+ 2B1D|1|B5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3'5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3' Methionine Repressor binding siteX-ray diffraction2.52005-09-27
1052B1D|1|C+ 2B1D|1|D5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3'5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3' Methionine Repressor binding siteX-ray diffraction2.52005-09-27
1062B1D|1|E+ 2B1D|1|F5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3'5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3' Methionine Repressor binding siteX-ray diffraction2.52005-09-27
1071FYM|1|CTAIL-TO-TAIL HSESERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATIONX-ray diffraction2.22001-09-28
1081FYM|1|DTAIL-TO-TAIL HSESERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATIONX-ray diffraction2.22001-09-28
1091ZPH|1|A+ 1ZPH|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure analysis of the minor groove binding quinolinium quaternary salt SN 8315 complexed with CGCGAATTCGCGX-ray diffraction1.82005-10-11
1102NLM|1|A+ 2NLM|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal structure of the DB 911- D(CGCGAATTCGCG)2 complex at 2.05 A resolution.X-ray diffraction2.052007-10-30
1111QV4|1|A+ 1QV4|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'B-DNA Dodecamer CGTGAATTCACG complexed with minor groove binder methylproamineX-ray diffraction2.52004-09-07
1121CLQ|1|D+ 1CLQ|1|EDNA (5'-D(*AP*GP*TP*AP*GP*TP*TP*CP*CP*GP*CP*G)-3'), DNA (5'-D(*GP*CP*GP*GP*AP*AP*CP*TP*AP*CP*T)-3')CRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTIONX-ray diffraction2.71999-10-28
1133OH6|1|C+ 3OH6|1|B5'-D(*GP*AP*CP*AP*(BRU)P*GP*AP*AP*(BRU)P*GP*CP*C)-3', 5'-D(*GP*CP*AP*TP*TP*CP*AP*TP*GP*TP*C)-3'AlkA Undamaged DNA Complex: Interrogation of a C:G base pairX-ray diffraction2.8942010-09-15
1142ZKE|1|C+ 2ZKE|1|DDNA (5'-D(*DCP*DTP*DAP*DCP*DCP*DGP*DGP*DAP*DTP*DTP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DAP*DAP*DTP*DCP*(5CM)P*DGP*DGP*DTP*DAP*DG)-3')Crystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-ray diffraction2.62008-09-09
1153N4O|1|D+ 3N4O|1|E5'-D(*CP*GP*CP*GP*AP*AP*TP*(B7C)P*CP*GP*CP*G)-3'Insights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-oneX-ray diffraction2.92010-08-11
1163HQG|1|B5'-D(*TP*CP*GP*AP*CP*CP*AP*GP*GP*CP*TP*A)-3'Crystal structure of restriction endonuclease EcoRII catalytic C-terminal domain in complex with cognate DNAX-ray diffraction2.62009-09-22
117445D|1|A+ 445D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', Benzimidazole derivative complexX-ray diffraction2.62000-02-02
118447D|1|A+ 447D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'X-ray diffraction2.22000-03-06
1193GJJ|1|A+ 3GJJ|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(B7C)P*CP*GP*CP*G)-3'crystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-oneX-ray diffraction2.92010-03-31
1203EIL|1|A+ 3EIL|1|B5'-D(*DCP*DGP*DTP*DTP*DAP*DAP*DTP*DTP*DAP*DAP*DCP*DG)-3'Structure of B-DNA d(CGTTAATTAACG)2 in the presence of ManganeseX-ray diffraction2.62009-06-02
1213EIL|1|C+ 3EIL|1|D5'-D(*DCP*DGP*DTP*DTP*DAP*DAP*DTP*DTP*DAP*DAP*DCP*DG)-3'Structure of B-DNA d(CGTTAATTAACG)2 in the presence of ManganeseX-ray diffraction2.62009-06-02
1223EIL|1|E+ 3EIL|1|F5'-D(*DCP*DGP*DTP*DTP*DAP*DAP*DTP*DTP*DAP*DAP*DCP*DG)-3'Structure of B-DNA d(CGTTAATTAACG)2 in the presence of ManganeseX-ray diffraction2.62009-06-02
1231PP8|1|E+ 1PP8|1|GALPHA-SCS INRcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-ray diffraction3.052003-11-18
1241PP8|1|I+ 1PP8|1|TALPHA-SCS INRcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-ray diffraction3.052003-11-18
1251PP8|1|J+ 1PP8|1|KALPHA-SCS INRcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-ray diffraction3.052003-11-18
1261PP8|1|R+ 1PP8|1|YALPHA-SCS INRcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-ray diffraction3.052003-11-18
1273GJH|1|A+ 3GJH|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(B7C)P*GP*CP*G)-3'Crystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-oneX-ray diffraction2.92010-03-31
1282ZO2|1|D+ 2ZO2|1|EDNA (5'-D(*DAP*DAP*DCP*DTP*DGP*DCP*DGP*DCP*DAP*DGP*DTP*DT)-3')Mouse NP95 SRA domain non-specific DNA complexX-ray diffraction3.092008-09-09
1291ODG|1|W5'-D(*TP*AP*GP*GP*CP*5CM*TP*GP*GP*AP*TP*CP)-3'Escherichia coliVery-short-patch DNA repair endonuclease bound to its reaction product siteX-ray diffraction2.82003-03-13
130436D|1|A+ 436D|1|B5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3'THE DICKERSON-DREW B-DNA DODECAMER REVISITED-AT ATOMIC RESOLUTIONX-ray diffraction1.11998-11-25
1312DYW|1|A+ 2DYW|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'A Backbone binding DNA complexX-ray diffraction1.132007-01-02
132460D|1|A+ 460D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3')A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVEX-ray diffraction1.21999-04-08
1331JGR|1|A+ 1JGR|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Crystal Structure Analysis of the B-DNA Dodecamer CGCGAATTCGCG with Thallium Ions.X-ray diffraction1.22001-09-05
1342VLA|1|L+ 2VLA|1|M5'-D(*GP*GP*TP*AP*CP*CP*CP*GP*TP*GP *GP*A)-3', 5'-D(*TP*CP*CP*AP*CP*GP*GP*GP*TP*AP *CP*C)-3'Crystal structure of restriction endonuclease BpuJI recognition domain in complex with cognate DNAX-ray diffraction1.32008-05-06
135355D|1|A+ 355D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')synthetic constructTHE B-DNA DODECAMER AT HIGH RESOLUTIONX-ray diffraction1.41997-10-13
136403D|1|A+ 403D|1|BDNA (5'-D(*CP*GP*CP*(IGU)P*AP*AP*TP*TP*TP*GP*CP*G)-3')5'-D(*CP*GP*CP*(HYD)AP*AP*AP*TP*TP*TP*GP*CP*G)-3', 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLEX-ray diffraction1.41998-07-06
1372EA0|1|B+ 2EA0|1|C5'-D(P*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3', 5'-D(P*GP*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*G)-3'Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli in complex with AP-site containing DNA substrateX-ray diffraction1.42008-02-26
138463D|1|A+ 463D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')CALCIUM FORM OF D(CGCGAATTCGCG)2X-ray diffraction1.451999-10-08
1392DPB|1|A+ 2DPB|1|BDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DUP*DCP*DGP*DCP*DG)-3')Crystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridineX-ray diffraction1.52007-04-17
140461D|1|A+ 461D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3')A "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVEX-ray diffraction1.51999-04-08
1413JXY|1|B+ 3JXY|1|CDNA (5'-D(*CP*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*AP*CP*TP*GP*AP*CP*GP*GP*G)-3')Bacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing a GT MismatchX-ray diffraction1.52010-09-22
1422DP7|1|A+ 2DP7|1|BDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*DUP*DCP*DGP*DCP*DG)-3')Crystal Structure of D(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridineX-ray diffraction1.552007-04-17
1431G8N|1|A+ 1G8N|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-ray diffraction1.552001-02-05
1442DPC|1|A+ 2DPC|1|BDNA (5'-D(*DCP*DGP*DCP*DGP*DAP*DAP*DTP*(OMU)P*DCP*DGP*DCP*DG)-3')Crystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-O-methyluridineX-ray diffraction1.552007-04-17
145389D|1|A+ 389D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*TP*CP*GP*CP*G)-3')CRYSTAL STRUCTURE OF B-DNA WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINES: IMPLICATIONS OF CONFORMATIONAL PREORGANIZATION FOR DUPLEX STABILITYX-ray diffraction1.551998-05-05
146388D|1|A+ 388D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(TAF)P*(TAF)P*CP*GP*CP*G)-3')CRYSTAL STRUCTURE OF B-DNA WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINES: IMPLICATIONS OF CONFORMATIONAL PREORGANIZATION FOR DUPLEX STABILITYX-ray diffraction1.551998-05-05
1471G75|1|A+ 1G75|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG): 5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-ray diffraction1.572001-02-05
1481J8L|1|A+ 1J8L|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*(C45)P*GP*CP*G)-3')Molecular and Crystal Structure of D(CGCAAATTMO4CGCG): the Watson-Crick Type N4-Methoxycytidine/Adenosine Base Pair in B-DNAX-ray diffraction1.62001-09-28
1491I3T|1|A+ 1I3T|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(C45)P*GP*CP*GP)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNAX-ray diffraction1.62001-09-14
1501EDR|1|A+ 1EDR|1|B5'-D(*CP*GP*CP*GP*(A47)AP*AP*TP*TP*CP*GP*CP*G)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG) AT 1.6 ANGSTROMX-ray diffraction1.62000-02-16
151456D|1|A+ 456D|1|BDNA (5'-D(*CP*GP*CP*GP*(A47)P*AP*TP*CP*CP*GP*CP*G)-3')MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATCCGCG): THE WATSON-CRICK TYPE N6-METHOXYADENOSINE/CYTIDINE BASE-PAIRS IN B-DNAX-ray diffraction1.62000-01-01
1523JX7|1|B+ 3JX7|1|CDNA (5'-D(*CP*CP*CP*GP*TP*TP*AP*GP*TP*CP*CP*G)-3'), DNA (5'-D(*CP*GP*GP*AP*CP*TP*(DZM)P*AP*CP*GP*GP*G)-3')Bacillus cereus alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-METHYLADENINE analogX-ray diffraction1.62010-09-22
1531VE8|1|A+ 1VE8|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5FC)P*GP*CP*G)-3'X-Ray analyses of oligonucleotides containing 5-formylcytosine, suggesting a structural reason for codon-anticodon recognition of mitochondrial tRNA-Met; Part 1, d(CGCGAATT(f5C)GCG)X-ray diffraction1.652005-06-28
1542C7P|1|C+ 2C7P|1|D5'-D(*G*GP*AP*TP*GP*(5CM*2PR)*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*CP*GP*CP*AP*TP*CP*C)-3'synthetic constructHhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine opposite to the target base (GCGC:GMPC) and SAHX-ray diffraction1.72005-12-14
1552O4A|1|B+ 2O4A|1|CDNA (5'-D(*DGP*DCP*DAP*DTP*DAP*DTP*DAP*DTP*DTP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DAP*DTP*DAP*DTP*DAP*DTP*DGP*DC)-3')Crystal Structure of the N-terminal CUT Domain of SATB1 Bound to Matrix Attachment Region DNAX-ray diffraction1.752007-08-14
1561EHV|1|ADNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')A NEW CRYSTAL STRUCTURE FOR THE DODECAMER C-G-C-G-A-A-T-T-C-G-C-G: SYMMETRY EFFECTS ON SEQUENCE-DEPENDENT DNA STRUCTUREX-ray diffraction1.82000-07-14
1571D3R|1|A+ 1D3R|1|BDNA (5'-D(*CP*(BRU)P*CP*CP*(BRU)P*CP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*CP*GP*GP*AP*G)-3')CRYSTAL STRUCTURE OF TRIPLEX DNAX-ray diffraction1.82000-01-01
1581G8V|1|A+ 1G8V|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-ray diffraction1.82001-02-05
159453D|1|A+ 453D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'-BENZIMIDAZOLE COMPLEXX-ray diffraction1.82000-05-15
1603BAM|1|C+ 3BAM|1|EDNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3'), DNA (5'-D(P*GP*AP*TP*CP*CP*AP*TP*A)-3')RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND MANGANESE IONS (POST-REACTIVE COMPLEX)X-ray diffraction1.81999-01-13
1611D3R|1|C+ 1D3R|1|DDNA (5'-D(*CP*(BRU)P*CP*CP*(BRU)P*CP*CP*GP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*CP*GP*GP*AP*G)-3')CRYSTAL STRUCTURE OF TRIPLEX DNAX-ray diffraction1.82000-01-01
1621DOU|1|A+ 1DOU|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')MONOVALENT CATIONS SEQUESTER WITHIN THE A-TRACT MINOR GROOVE OF [D(CGCGAATTCGCG)]2X-ray diffraction1.821999-12-27
163360D|1|A+ 360D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')synthetic constructSTRUCTURE OF 2,5-BIS{[4-(N-ETHYLAMIDINO)PHENYL]}FURAN COMPLEXED TO 5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3'. A MINOR GROOVE DRUG COMPLEX, SHOWING PATTERNS OF GROOVE HYDRATIONX-ray diffraction1.851998-07-16
1641G8U|1|A+ 1G8U|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*(UFR)P*CP*GP*CP*G)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-ray diffraction1.852001-02-05
1652OPF|1|B+ 2OPF|1|C5'-D(*GP*GP*CP*TP*TP*CP*AP*TP*CP*CP*TP*G)-3', 5'-D(P*CP*AP*GP*GP*AP*(PED)P*GP*AP*AP*GP*CP*C)-3'Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrateX-ray diffraction1.852008-02-26
1661BNA|1|A+ 1BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURE OF A B-DNA DODECAMER. CONFORMATION AND DYNAMICSX-ray diffraction1.91981-05-21
1671FMS|1|A+ 1FMS|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Structure of complex between cyclohexyl-bis-furamidine and d(CGCGAATTCGCG)X-ray diffraction1.92000-09-11
1687BNA|1|A+ 7BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')ANISOTROPIC THERMAL-PARAMETER REFINEMENT OF THE DNA DODECAMER CGCGAATTCGCG BY THE SEGMENTED RIGID-BODY METHODX-ray diffraction1.91985-07-17
1699BNA|1|A+ 9BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')RE-REFINEMENT OF THE B-DODECAMER D(CGCGAATTCGCG) WITH A COMPARATIVE ANALYSIS OF THE SOLVENT IN IT AND IN THE Z-HEXAMER D(5BRCG5BRCG5BRCG)X-ray diffraction1.91991-04-15
1701D45|1|A+ 1D45|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-25 DEGREES C, PIPERAZINE DOWNX-ray diffraction1.91992-04-15
1712C7R|1|C+ 2C7R|1|D5'-D(*G*GP*AP*TP*GP*(5CM)*GP*CP*TP*GP*AP*C)-3', 5'-D(*G*TP*CP*AP*GP*(2PR)*GP*CP*AP*TP*CP*C)-3'synthetic constructHhaI DNA methyltransferase (T250G mutant) complex with oligonucleotide containing 2-aminopurine as a target base (GPGC:GMGC) and SAHX-ray diffraction1.92005-12-14
1723EEO|1|C+ 3EEO|1|D5'-D(P*DCP*DCP*DAP*DTP*DGP*DCP*DGP*DCP*DTP*DGP*DAP*DC)-3', 5'-D(P*DGP*DTP*DCP*DAP*DGP*(PDI)P*DGP*DCP*DAP*DTP*DGP*DG)-3'M. HhaI co-crystallized with synthetic dsDNA containing a propane diol in place of the deoxycytidine residue targeted for methylation.X-ray diffraction1.942010-03-02
173109D|1|A+ 109D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')VARIABILITY IN DNA MINOR GROOVE WIDTH RECOGNISED BY LIGAND BINDING: THE CRYSTAL STRUCTURE OF A BIS-BENZIMIDAZOLE COMPOUND BOUND TO THE DNA DUPLEX D(CGCGAATTCGCG)2X-ray diffraction21995-05-08
1741D63|1|A+ 1D63|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')CRYSTAL STRUCTURE OF A BERENIL-D(CGCAAATTTGCG) COMPLEX; AN EXAMPLE OF DRUG-DNA RECOGNITION BASED ON SEQUENCE-DEPENDENT STRUCTURAL FEATURESX-ray diffraction21993-01-15
1751FTD|1|A+ 1FTD|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'-SYMMETRIC BIS-BENZIMIDAZOLE COMPLEXX-ray diffraction22001-02-26
1761D44|1|A+ 1D44|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE DOWNX-ray diffraction21992-04-15
1774DNB|1|A+ 4DNB|1|BDNA (5'-D(*CP*GP*CP*GP*AP*(6MA)P*TP*TP*CP*GP*CP*G)-3')METHYLATION OF THE ECORI RECOGNITION SITE DOES NOT ALTER DNA CONFORMATION. THE CRYSTAL STRUCTURE OF D(CGCGAM6ATTCGCG) AT 2.0 ANGSTROMS RESOLUTIONX-ray diffraction21989-01-09
178363D|1|A5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM)P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-ray diffraction21997-12-15
1791FMQ|1|A+ 1FMQ|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'Cyclo-butyl-bis-furamidine complexed with dCGCGAATTCGCGX-ray diffraction22000-09-11
1802D47|1|A+ 2D47|1|BDNA (5'-D(*CP*CP*CP*CP*CP*GP*CP*GP*GP*GP*GP*G)-3')MOLECULAR STRUCTURE OF A COMPLETE TURN OF A-DNAX-ray diffraction21991-10-02
181457D|1|A+ 457D|1|BDNA (5'-D(*CP*GP*CP*GP*(A47)P*AP*TP*TP*CP*GP*CP*G)-3')MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG): N6-METHOXYADENOSINE/ THYMIDINE BASE-PAIRS IN B-DNAX-ray diffraction22000-01-01
182127D|1|A+ 127D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH HOECHST 33258X-ray diffraction21994-01-15
1831D43|1|A+ 1D43|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE UPX-ray diffraction21992-04-15
184267D|1|A+ 267D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction21996-08-28
1851D46|1|A+ 1D46|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-100 DEGREES C, PIPERAZINE DOWNX-ray diffraction21992-04-15
1861D27|1|A+ 1D27|1|BDNA (5'-D(*CP*GP*CP*(6OG)P*AP*AP*TP*TP*TP*GP*CP*G)-3')HIGH-RESOLUTION STRUCTURE OF A MUTAGENIC LESION IN DNAX-ray diffraction21992-04-07
187363D|1|B5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM)P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-ray diffraction21997-12-15
1882O49|1|B+ 2O49|1|CDNA (5'-D(*DGP*DCP*DAP*DTP*DAP*DTP*DAP*DTP*DTP*DAP*DGP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DAP*DTP*DAP*DTP*DAP*DTP*DGP*DC)-3')Crystal Structure of the N-terminal CUT domain of SATB1 Bound to Matrix Attachment Region DNAX-ray diffraction22007-08-14
189363D|1|C5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM)P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-ray diffraction21997-12-15
1902BAM|1|C+ 2BAM|1|DDNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3')RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE-REACTIVE COMPLEX).X-ray diffraction21999-10-31
191363D|1|D5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM)P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-ray diffraction21997-12-15
192363D|1|E5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM)P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-ray diffraction21997-12-15
193363D|1|F5'-D(*(C42)P*(G38)P*(C42)P*(G38)P*(A43)P*(A43)P*(NYM)P*(NYM)P*(C42)P*(G38)P*(C42)P*DG)-3'High-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-ray diffraction21997-12-15
194265D|1|A+ 265D|1|BDNA (5'-D(*CP*GP*(5CM)P*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction2.011996-08-28
195270D|1|A+ 270D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction2.011996-08-28
196268D|1|A+ 268D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction2.021996-08-28
197271D|1|A+ 271D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*UP*UP*CP*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction2.021996-08-28
198266D|1|A+ 266D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction2.031996-08-28
1996MHT|1|C+ 6MHT|1|DDNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*(4SC)P*GP*CP*AP*TP*GP*G)-3')Haemophilus haemolyticusTERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND DNA CONTAINING 4'-THIO-2'DEOXYCYTIDINE AT THE TARGETX-ray diffraction2.051998-08-12
2001D64|1|A+ 1D64|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')CRYSTAL STRUCTURE OF A PENTAMIDINE-OLIGONUCLEOTIDE COMPLEX: IMPLICATIONS FOR DNA-BINDING PROPERTIESX-ray diffraction2.11993-01-15
2011ZJE|1|A+ 1ZJE|1|B5'-D(*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*T)-3', 5'-D(*TP*AP*GP*CP*CP*CP*CP*GP*CP*CP*CP*C)-3'12mer-spdX-ray diffraction2.12005-05-10
2021I47|1|A+ 1I47|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(C45)P*GP*CP*GP)-3'MOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNAX-ray diffraction2.12003-02-11
2031PRP|1|A+ 1PRP|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')CRYSTAL STRUCTURE OF D(CGCGAATTCGCG) COMPLEXED WITH PROPAMIDINE, A SHORT-CHAIN HOMOLOGUE OF THE DRUG PENTAMIDINX-ray diffraction2.11994-01-15
204291D|1|A+ 291D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(T48)P*(T48)P*CP*GP*CP*G)-3')CRYSTAL STRUCTURES OF OLIGODEOXYRIBONUCLEOTIDES CONTAINING 6'-ALPHA-METHYL AND 6'-ALPHA-HYDROXY CARBOCYCLIC THYMIDINESX-ray diffraction2.141996-11-12
205269D|1|A+ 269D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(5CM)P*GP*CP*G)-3')STRUCTURAL STUDIES ON NUCLEIC ACIDSX-ray diffraction2.151996-08-28
2061EOO|1|C+ 1EOO|1|DDNA (5'-D(*GP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*C)-3')ECORV BOUND TO COGNATE DNAX-ray diffraction2.162000-04-04
2072DND|1|A+ 2DND|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')A BIFURCATED HYDROGEN-BONDED CONFORMATION IN THE D(A.T) BASE PAIRS OF THE DNA DODECAMER D(CGCAAATTTGCG) AND ITS COMPLEX WITH DISTAMYCINX-ray diffraction2.21989-01-09
2081D65|1|A+ 1D65|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')MOLECULAR STRUCTURE OF THE B-DNA DODECAMER D(CGCAAATTTGCG)2; AN EXAMINATION OF PROPELLER TWIST AND MINOR-GROOVE WATER STRUCTURE AT 2.2 ANGSTROMS RESOLUTIONX-ray diffraction2.21993-01-15
209121D|1|A+ 121D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')MOLECULAR STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSINX-ray diffraction2.21994-01-15
210287D|1|A+ 287D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*TP*AP*TP*CP*GP*CP*G)-3')X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATUREX-ray diffraction2.21997-05-08
2111D86|1|A+ 1D86|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEXX-ray diffraction2.21993-07-15
212302D|1|A+ 302D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL IN' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2X-ray diffraction2.21997-01-20
213289D|1|A+ 289D|1|BDNA (5'-R(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')TARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2X-ray diffraction2.21996-12-17
214263D|1|A+ 263D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')ISOHELICITY AND PHASING IN DRUG-DNA SEQUENCE RECOGNITION: CRYSTAL STRUCTURE OF A TRIS(BENZIMIDAZOLE)-OLIGONUCLEOTIDE COMPLEXX-ray diffraction2.21996-10-15
2151ZJF|1|A+ 1ZJF|1|B5'-D(*AP*GP*GP*GP*GP*CP*GP*GP*GP*GP*CP*T)-3', 5'-D(*TP*AP*GP*CP*CP*CP*CP*GP*CP*CP*CP*C)-3'12mer-spd-P4NX-ray diffraction2.22005-05-10
216298D|1|A+ 298D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')TARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2X-ray diffraction2.21996-12-17
2171D80|1|A+ 1D80|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*GP*GP*CP*G)-3')CRYSTAL STRUCTURE OF AN OLIGONUCLEOTIDE DUPLEX CONTAINING G.G BASE-PAIRS: THE INFLUENCE OF MISPAIRING ON DNA BACKBONE CONFORMATIONX-ray diffraction2.21993-07-15
218227D|1|A+ 227D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')A CRYSTALLOGRAPHIC AND SPECTROSCOPIC STUDY OF THE COMPLEX BETWEEN D(CGCGAATTCGCG)2 AND 2,5-BIS(4-GUANYLPHENYL)FURAN, AN ANALOGUE OF BERENIL. STRUCTURAL ORIGINS OF ENHANCED DNA-BINDING AFFINITYX-ray diffraction2.21995-11-11
219102D|1|A+ 102D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')SEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINEX-ray diffraction2.21995-02-07
2201ILC|1|A+ 1ILC|1|B5'-D(*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*T)-3'DNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.X-ray diffraction2.22002-05-08
221166D|1|A+ 166D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DRUG-DNA MINOR GROOVE RECOGNITION: CRYSTAL STRUCTURE OF GAMMA-OXAPENTAMIDINE COMPLEXED WITH D(CGCGAATTCGCG)2X-ray diffraction2.21994-10-15
2221DN9|1|A+ 1DN9|1|BDNA (5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*TP*GP*CP*G)-3')STRUCTURE OF AN ALTERNATING-B DNA HELIX AND ITS RELATIONSHIP TO A-TRACT DNAX-ray diffraction2.21990-04-15
223311D|1|A+ 311D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')THE ROLE OF HYDROGEN BONDING IN MINOR-GROOVE DRUG-DNA RECOGNITION. STRUCTURE OF A BIS-AMIDINIUM DERIVATIVE OF HOECHST 33258 COMPLEXED TO THE DODECANUCLEOTIDE D(CGCGAATTCGCG)2X-ray diffraction2.21997-02-11
224303D|1|A+ 303D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')META-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL OUT' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2X-ray diffraction2.21997-01-20
2258BNA|1|A+ 8BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')BINDING OF HOECHST 33258 TO THE MINOR GROOVE OF B-DNAX-ray diffraction2.21987-01-15
2261BHM|1|C+ 1BHM|1|DDNA (5'-D(*TP*AP*TP*GP*GP*AP*TP*CP*CP*AP*TP*A)-3')RESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNAX-ray diffraction2.21995-07-12
2271ILC|1|C+ 1ILC|1|D5'-D(*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*T)-3'DNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.X-ray diffraction2.22002-05-08
2281ILC|1|E+ 1ILC|1|F5'-D(*AP*CP*CP*GP*AP*AP*TP*TP*CP*GP*GP*T)-3'DNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.X-ray diffraction2.22002-05-08
2296BNA|1|A+ 6BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')BINDING OF AN ANTITUMOR DRUG TO DNA. NETROPSIN AND C-G-C-G-A-A-T-T-BRC-G-C-GX-ray diffraction2.211984-10-29
230150D|1|A+ 150D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(EDA)P*GP*CP*G)-3')GUANINE.1,N6-ETHENOADENINE BASE-PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(EDA)GCG)X-ray diffraction2.251994-05-31
231249D|1|A+ 249D|1|BDNA (5'-D(*CP*GP*CP*TP*CP*TP*AP*GP*AP*GP*CP*G)-3')STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXESX-ray diffraction2.251996-04-19
232296D|1|A+ 296D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')SEQUENCE-DEPENDENT EFFECTS IN DRUG-DNA INTERACTION: THE CRYSTAL STRUCTURE OF HOECHST 33258 BOUND TO THE D(CGCAAATTTGCG)2 DUPLEXX-ray diffraction2.251996-12-04
233101D|1|A+ 101D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')REFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATIONX-ray diffraction2.251995-02-27
2341LEX|1|A+ 1LEX|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 1)X-ray diffraction2.251996-04-03
235144D|1|A+ 144D|1|BDNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')MINOR GROOVE BINDING OF SN6999 TO AN ALKYLATED DNA: MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-SN6999 COMPLEXX-ray diffraction2.251995-05-30
2361LEY|1|A+ 1LEY|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 2)X-ray diffraction2.251996-04-03
237218D|1|A+ 218D|1|BDNA (5'-D(*CP*GP*TP*GP*AP*AP*TP*TP*CP*(6OG)P*CP*G)-3')THE STRUCTURE OF A NEW CRYSTAL FORM OF A DNA DODECAMER CONTAINING T.(O6ME)G BASE PAIRSX-ray diffraction2.251995-10-15
238129D|1|A+ 129D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')DNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH HOECHST 33342X-ray diffraction2.251994-01-15
2391DNH|1|A+ 1DNH|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')THE MOLECULAR STRUCTURE OF THE COMPLEX OF HOECHST 33258 AND THE DNA DODECAMER D(CGCGAATTCGCG)X-ray diffraction2.251989-01-09
240111D|1|A+ 111D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*GP*GP*CP*G)-3')CRYSTAL STRUCTURE AND STABILITY OF A DNA DUPLEX CONTAINING A(ANTI).G(SYN) BASE-PAIRSX-ray diffraction2.251993-07-15
241119D|1|A+ 119D|1|BDNA (5'-D(*CP*GP*TP*AP*GP*AP*TP*CP*TP*AP*CP*G)-3')CRYSTAL AND MOLECULAR STRUCTURE OF D(CGTAGATCTACG) AT 2.25 ANGSTROMS RESOLUTIONX-ray diffraction2.251993-10-15
242249D|1|C+ 249D|1|DDNA (5'-D(*CP*GP*CP*TP*CP*TP*AP*GP*AP*GP*CP*G)-3')STRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXESX-ray diffraction2.251996-04-19
2431D89|1|A+ 1D89|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*AP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*TP*TP*TP*TP*TP*CP*GP*CP*G)-3')A DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BENDX-ray diffraction2.31993-07-15
2444BNA|1|A+ 4BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')REVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCGX-ray diffraction2.31982-04-15
245194D|1|A+ 194D|1|BDNA (5'-D(*CP*GP*CP*GP*TP*TP*AP*AP*CP*GP*CP*G)-3')X-RAY STRUCTURES OF THE B-DNA DODECAMER D(CGCGTTAACGCG) WITH AN INVERTED CENTRAL TETRANUCLEOTIDE AND ITS NETROPSIN COMPLEXX-ray diffraction2.31995-03-31
246195D|1|A+ 195D|1|BDNA (5'-D(*CP*GP*CP*GP*TP*TP*AP*AP*CP*GP*CP*G)-3')X-RAY STRUCTURES OF THE B-DNA DODECAMER D(CGCGTTAACGCG) WITH AN INVERTED CENTRAL TETRANUCLEOTIDE AND ITS NETROPSIN COMPLEXX-ray diffraction2.31995-02-07
2471D89|1|C+ 1D89|1|DDNA (5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*AP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*TP*TP*TP*TP*TP*CP*GP*CP*G)-3')A DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BENDX-ray diffraction2.31993-07-15
2483CWT|1|E+ 3CWT|1|FDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FI)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DAP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Adenine Base PairX-ray diffraction2.32008-09-02
2493CWS|1|E+ 3CWS|1|FDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FI)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DTP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Thymine Base PairX-ray diffraction2.32008-09-02
2503CW7|1|E+ 3CW7|1|FDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(8OG)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-ray diffraction2.32008-09-02
2511D89|1|E+ 1D89|1|FDNA (5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*AP*AP*CP*G)-3'), DNA (5'-D(*CP*GP*TP*TP*TP*TP*TP*TP*CP*GP*CP*G)-3')A DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BENDX-ray diffraction2.31993-07-15
2523CW7|1|G+ 3CW7|1|HDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(8OG)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-ray diffraction2.32008-09-02
2533CWT|1|G+ 3CWT|1|HDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FI)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DAP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Adenine Base PairX-ray diffraction2.32008-09-02
2543CWS|1|G+ 3CWS|1|HDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FI)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DTP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Thymine Base PairX-ray diffraction2.32008-09-02
2551MWI|1|D5'-D(*CP*GP*CP*GP*AP*GP*(AAB)P*TP*CP*GP*CP*G)-3'Crystal structure of a MUG-DNA product complexX-ray diffraction2.352002-10-04
2569MHT|1|C+ 9MHT|1|D5'-D(P*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*AP*GP*(3DR)P*GP*CP*AP*TP*GP*G)-3'CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEXX-ray diffraction2.391998-12-01
2571D30|1|A+ 1D30|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')THE STRUCTURE OF DAPI BOUND TO DNAX-ray diffraction2.41992-04-15
2581EEL|1|A+ 1EEL|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'STRUCTURE OF A COMPLEX BETWEEN THE DNA SEQUENCE DCGCGAATTCGCG AND BIS[PIPERIDINO-ETHYL]-FURAMIDINEX-ray diffraction2.42000-02-09
2591DNE|1|A+ 1DNE|1|BDNA (5'-D(*CP*GP*CP*GP*AP*TP*AP*TP*CP*GP*CP*G)-3')MOLECULAR STRUCTURE OF THE NETROPSIN-D(CGCGATATCGCG) COMPLEX: DNA CONFORMATION IN AN ALTERNATING AT SEGMENT; CONFORMATION 2X-ray diffraction2.41989-01-09
260233D|1|A+ 233D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*)-D(*(T49)P*(T49)P*)-D(*CP*GP*CP*G)-3')THE CRYSTAL STRUCTURE ANALYSIS OF D(CGCGAASSCGCG)2: A SYNTHETIC DNA DODECAMER DUPLEX CONTAINING FOUR 4'-THIO-2'-DEOXYTHYMIDINE NUCLEOTIDESX-ray diffraction2.41996-06-21
2611IHH|1|A+ 1IHH|1|B5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'2.4 ANGSTROM CRYSTAL STRUCTURE OF AN OXALIPLATIN 1,2-D(GPG) INTRASTRAND CROSS-LINK IN A DNA DODECAMER DUPLEXX-ray diffraction2.42001-10-26
2621LU5|1|A+ 1LU5|1|B5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA DuplexX-ray diffraction2.42002-12-20
2631LP7|1|A+ 1LP7|1|B5'-D(*CP*GP*CP*AP*TP*AP*TP*AP*AP*GP*CP*G)-3', 5'-D(*CP*GP*CP*TP*TP*AP*TP*AP*TP*GP*CP*G)-3'Crystal Structure of a Non-Self Complementary DNA Dodecamer Containing an A/T Tract: Analysis of the Effect of Crystal Environment on Local Helical ParametersX-ray diffraction2.42004-01-20
2641D77|1|A+ 1D77|1|BDNA (5'-D(*CP*GP*CP*IP*AP*AP*TP*TP*CP*GP*CP*G)-3')CRYSTAL STRUCTURE OF A B-DNA DODECAMER CONTAINING INOSINE, D(CGCIAATTCGCG), AT 2.4 ANGSTROMS RESOLUTION AND ITS COMPARISON WITH OTHER B-DNA DODECAMERSX-ray diffraction2.41993-07-15
2653N7Q|1|B+ 3N7Q|1|CDNA (5'-D(*CP*CP*GP*GP*GP*CP*TP*CP*TP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*AP*GP*AP*GP*CP*CP*CP*GP*G)-3')Crystal structure of human mitochondrial mTERF fragment (aa 99-399) in complex with a 12-mer DNA encompassing the tRNALeu(UUR) binding sequenceX-ray diffraction2.42010-06-16
2661LU5|1|C+ 1LU5|1|D5'-D(*CP*CP*TP*CP*TP*GP*GP*TP*CP*TP*CP*C)-3', 5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3'2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA DuplexX-ray diffraction2.42002-12-20
2673CWA|1|E+ 3CWA|1|FDNA (5'-D(*(8OG)P*DAP*DCP*DAP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-ray diffraction2.42008-09-02
2683CVS|1|E+ 3CVS|1|FDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(8OG)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DAP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Adenine Base PairX-ray diffraction2.42008-09-02
2693CVS|1|G+ 3CVS|1|HDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(8OG)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DAP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Adenine Base PairX-ray diffraction2.42008-09-02
2703CWA|1|G+ 3CWA|1|HDNA (5'-D(*(8OG)P*DAP*DCP*DAP*DTP*DGP*DAP*DGP*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-ray diffraction2.42008-09-02
271264D|1|A+ 264D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*TP*GP*CP*G)-3')THREE-DIMENSIONAL CRYSTAL STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR-GROOVE-BINDING DRUG HOECHST 33258X-ray diffraction2.441995-03-31
2721D81|1|A+ 1D81|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*IP*GP*CP*G)-3')THE CONFORMATIONAL VARIABILITY OF AN ADENOSINE. INOSINE BASE-PAIR IN A SYNTHETIC DNA DODECAMERX-ray diffraction2.51992-10-15
273178D|1|A+ 178D|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*(8OG)P*GP*CP*G)-3')CRYSTAL STRUCTURE OF A DNA DUPLEX CONTAINING 8-HYDROXYDEOXYGUANINE.ADENINE BASE-PAIRSX-ray diffraction2.51994-10-04
274130D|1|A+ 130D|1|BDNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG) COMPLEXED WITH HOECHST 33342X-ray diffraction2.51994-01-15
2751D29|1|A+ 1D29|1|BDNA (5'-D(*CP*GP*TP*GP*AP*AP*TP*TP*CP*AP*CP*G)-3')CRYSTAL STRUCTURE ANALYSIS OF THE B-DNA DODECAMER CGTGAATTCACGX-ray diffraction2.51992-04-15
276297D|1|A+ 297D|1|BDNA (5'-D(*CP*GP*CP*AP*IP*AP*TP*(5CM)P*TP*GP*CP*G)-3')X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATUREX-ray diffraction2.51997-02-19
277112D|1|A+ 112D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*AP*GP*CP*G)-3')MOLECULAR STRUCTURE OF THE G.A BASE PAIR IN DNA AND ITS IMPLICATIONS FOR THE MECHANISM OF TRANSVERSION MUTATIONSX-ray diffraction2.51993-07-15
2782DBE|1|A+ 2DBE|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')CRYSTAL STRUCTURE OF A BERENIL-DODECANUCLEOTIDE COMPLEX: THE ROLE OF WATER IN SEQUENCE-SPECIFIC LIGAND BINDINGX-ray diffraction2.51991-07-15
2791D98|1|A+ 1D98|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*AP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*TP*TP*TP*TP*TP*TP*GP*CP*G)-3')THE STRUCTURE OF AN OLIGO(DA).OLIGO(DT) TRACT AND ITS BIOLOGICAL IMPLICATIONSX-ray diffraction2.51993-04-15
280116D|1|ADNA (5'-D(*CP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*G)-3')CRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXISX-ray diffraction2.51993-04-15
281128D|1|A+ 128D|1|BDNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG) COMPLEXED WITH HOECHST 33258X-ray diffraction2.51994-01-15
2821D85|1|A+ 1D85|1|BDNA (5'-D(*CP*GP*CP*(G36)P*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEXX-ray diffraction2.51993-07-15
283114D|1|A+ 114D|1|BDNA (5'-D(*CP*GP*CP*IP*AP*AP*TP*TP*AP*GP*CP*G)-3')INOSINE-ADENINE BASE PAIRS IN A B-DNA DUPLEXX-ray diffraction2.51993-07-15
284285D|1|A+ 285D|1|BDNA (5'-D(*CP*GP*CP*AP*IP*AP*TP*(5CM)P*TP*GP*CP*G)-3')X-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATUREX-ray diffraction2.51997-05-08
2851D99|1|A+ 1D99|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURAL FEATURES AND HYDRATION OF A DODECAMER DUPLEX CONTAINING TWO C.A MISPAIRSX-ray diffraction2.51993-07-15
2861QPH|1|A5'-D(P*GP*AP*CP*CP*AP*CP*GP*TP*GP*GP*TP*CP)-3'CRYSTAL STRUCTURE OF THE A-DNA DODECAMER GACCACGTGGTCX-ray diffraction2.51999-05-27
287290D|1|A+ 290D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*(T32)P*(T32)P*CP*GP*CP*G)-3')CRYSTAL STRUCTURES OF OLIGODEOXYRIBONUCLEOTIDES CONTAINING 6'-ALPHA-METHYL AND 6'-ALPHA-HYDROXY CARBOCYCLIC THYMIDINESX-ray diffraction2.51996-11-12
2881DNM|1|A+ 1DNM|1|BDNA (5'-D(*CP*GP*CP*AP*AP*GP*CP*TP*GP*GP*CP*G)-3')CRYSTAL STRUCTURE AND SEQUENCE-DEPENDENT CONFORMATION OF THE A.G MIS-PAIRED OLIGONUCLEOTIDE D(CGCAAGCTGGCG)X-ray diffraction2.51991-07-15
289113D|1|A+ 113D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*TP*GP*CP*G)-3')THE STRUCTURE OF GUANOSINE-THYMIDINE MISMATCHES IN B-DNA AT 2.5 ANGSTROMS RESOLUTIONX-ray diffraction2.51993-07-15
2901M0E|1|C+ 1M0E|1|D5'-D(P*CP*CP*AP*TP*GP*CP*GP*CP*TP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*AP*GP*(Z)P*GP*CP*AP*TP*GP*G)-3'ZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASEX-ray diffraction2.52002-09-18
2913CVT|1|E+ 3CVT|1|FDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*(8OG)P*DAP*DGP*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-ray diffraction2.52008-09-02
2923CVT|1|G+ 3CVT|1|HDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*(8OG)P*DAP*DGP*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-ray diffraction2.52008-09-02
293117D|1|ADNA (5'-D(*GP*CP*GP*TP*AP*CP*GP*TP*AP*CP*GP*C)-3')CRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)X-ray diffraction2.551993-04-15
29410MH|1|B+ 10MH|1|CDNA (5'-D(P*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(P*GP*TP*CP*AP*GP*5NCP*GP*CP*AP*TP*GP*G)-3')TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGETX-ray diffraction2.551999-02-09
295328D|1|A+ 328D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURE OF A D(CGCGAATTCGCG)2-SN7167 COMPLEXX-ray diffraction2.61997-04-23
2961QP5|1|A+ 1QP5|1|BDNA (5'-D(*AP*CP*CP*GP*GP*CP*GP*CP*CP*AP*CP*A)-3'), DNA (5'-D(*TP*GP*TP*GP*GP*CP*GP*CP*CP*GP*GP*T)-3')BASE-PAIRING SHIFT IN A DODECAMER CONTAINING A (CA)N TRACTX-ray diffraction2.61999-06-14
2975BNA|1|A+ 5BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')THE PRIMARY MODE OF BINDING OF CISPLATIN TO A B-DNA DODECAMER: C-G-C-G-A-A-T-T-C-G-C-GX-ray diffraction2.61983-11-02
2981BDN|1|A+ 1BDN|1|BDNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*TP*TP*TP*TP*TP*GP*CP*G)-3')CRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACTX-ray diffraction2.61991-04-15
2991AIO|1|A+ 1AIO|1|BDNA (5'-D(*CP*CP*(BRU)P*CP*TP*[PT(NH3)2(GP*GP)]*TP*CP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3')CRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA CONTAINING THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATINX-ray diffraction2.61997-04-24
3001AIO|1|C+ 1AIO|1|DDNA (5'-D(*CP*CP*(BRU)P*CP*TP*[PT(NH3)2(GP*GP)]*TP*CP*TP*CP*C)-3'), DNA (5'-D(*GP*GP*AP*GP*AP*CP*CP*AP*GP*AP*GP*G)-3')CRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA CONTAINING THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATINX-ray diffraction2.61997-04-24
3011BDN|1|C+ 1BDN|1|DDNA (5'-D(*CP*GP*CP*AP*AP*AP*AP*AP*TP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*AP*TP*TP*TP*TP*TP*GP*CP*G)-3')CRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACTX-ray diffraction2.61991-04-15
3021EOP|1|C+ 1EOP|1|DDNA (5'-D(*GP*AP*AP*GP*AP*TP*AP*TP*CP*TP*TP*C)-3')ECORV BOUND TO COGNATE DNAX-ray diffraction2.62000-04-04
303330D|1|A+ 330D|1|BDNA (5'-D(*AP*CP*CP*GP*CP*CP*GP*GP*CP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*GP*CP*CP*GP*GP*CP*GP*GP*T)-3')BASE-PAIRING SHIFT IN THE MAJOR GROOVE OF (CA)N TRACTS BY B-DNA CRYSTAL STRUCTURESX-ray diffraction2.71997-04-30
3042BNA|1|A+ 2BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3')STRUCTURE OF A B-DNA DODECAMER AT 16 KELVINX-ray diffraction2.71982-02-03
3051G3X|1|A+ 1G3X|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-ray diffraction2.72002-08-16
3061D28|1|A+ 1D28|1|BDNA (5'-D(*CP*GP*TP*GP*AP*AP*TP*TP*CP*AP*CP*G)-3')CRYSTAL AND MOLECULAR STRUCTURE OF A DNA FRAGMENT: D(CGTGAATTCACG)X-ray diffraction2.71992-04-07
307329D|1|A+ 329D|1|BDNA (5'-D(*AP*CP*CP*GP*CP*(5CM)P*GP*GP*CP*GP*CP*C)-3'), DNA (5'-D(*GP*GP*CP*GP*CP*(5CM)P*GP*GP*CP*GP*GP*T)-3')EFFECT OF CYTOSINE METHYLATION ON DNA-DNA RECOGNITION AT CPG STEPSX-ray diffraction2.71997-04-30
3085MHT|1|C+ 5MHT|1|DDNA (5'-D(*CP*CP*AP*TP*GP*(5CM)P*GP*CP*TP*GP*AP*C)-3'), DNA (5'-D(*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3')TERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH HEMIMETHYLATED DNA AND ADOHCYX-ray diffraction2.71997-07-23
3091G3X|1|C+ 1G3X|1|D5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-ray diffraction2.72002-08-16
3101G3X|1|E+ 1G3X|1|F5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-ray diffraction2.72002-08-16
3111G3X|1|G+ 1G3X|1|H5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-ray diffraction2.72002-08-16
3121G3X|1|I+ 1G3X|1|J5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-ray diffraction2.72002-08-16
3131G3X|1|K+ 1G3X|1|L5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'INTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-ray diffraction2.72002-08-16
3141LE5|1|C+ 1LE5|1|D5'-D(*AP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*C)-3', 5'-D(*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*T)-3'Crystal structure of a NF-kB heterodimer bound to an IFNb-kBX-ray diffraction2.752003-04-15
3151LE5|1|G+ 1LE5|1|H5'-D(*AP*AP*GP*GP*AP*AP*TP*TP*TP*CP*CP*C)-3', 5'-D(*TP*GP*GP*GP*AP*AP*AP*TP*TP*CP*CP*T)-3'Crystal structure of a NF-kB heterodimer bound to an IFNb-kBX-ray diffraction2.752003-04-15
3168MHT|1|C+ 8MHT|1|D5'-D(P*CP*CP*AP*TP*GP*UP*GP*CP*TP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEXX-ray diffraction2.761998-11-30
3172Z6Q|1|C+ 2Z6Q|1|D+ 2Z6Q|1|EDNA (5'-D(*DGP*DAP*DTP*DAP*DGP*DCP*DGP*DCP*DTP*DAP*DTP*DC)-3'), DNA (5'-D(*DGP*DCP*DTP*DAP*DTP*DC)-3'), DNA (5'-D(*DTP*DGP*DAP*DTP*DAP*DG)-3')synthetic constructTernary structure of Arg165Ala M.HhaI C5-Cytosine DNA methyltransferase with unmodified DNA and AdoHcyX-ray diffraction2.792007-08-28
318425D|1|A+ 425D|1|BDNA (5'-D(*AP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3')5'-D(*AP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3'X-ray diffraction2.81999-10-14
3191D75|1|A+ 1D75|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(A38)P*GP*CP*G)-3')CONFORMATION OF THE GUANINE.8-OXOADENINE BASE PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(O8A)GCG)X-ray diffraction2.81993-01-15
3203CWU|1|E+ 3CWU|1|FDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FE)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DTP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxy-1,N6-ethenoadenine:Thymine Base PairX-ray diffraction2.82008-09-02
3213CWU|1|G+ 3CWU|1|HDNA (5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(2FE)P*DTP*DGP*DCP*DC)-3'), DNA (5'-D(*DGP*DGP*DCP*DAP*DTP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3')Crystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxy-1,N6-ethenoadenine:Thymine Base PairX-ray diffraction2.82008-09-02
3221MWJ|1|D5'-D(*CP*GP*CP*GP*A*GP*(DU)P*TP*CP*GP*CP*G)-3'Crystal Structure of a MUG-DNA pseudo substrate complexX-ray diffraction2.852002-10-11
3232ER8|1|E+ 2ER8|1|F5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*G)-3'Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplexX-ray diffraction2.852006-04-04
3242ER8|1|G+ 2ER8|1|H5'-D(*CP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*G)-3'Crystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplexX-ray diffraction2.852006-04-04
3257MHT|1|C+ 7MHT|1|D5'-D(P*CP*CP*AP*TP*GP*AP*GP*CP*TP*GP*AP*C)-3', 5'-D(P*GP*TP*CP*AP*GP*CP*GP*CP*AP*TP*GP*G)-3'CYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEXX-ray diffraction2.871998-11-30
326153D|1|A+ 153D|1|BDNA (5'-D(*CP*GP*AP*GP*AP*AP*TP*TP*CP*(6OG)P*CP*G)-3')CRYSTAL STRUCTURE OF A MISPAIRED DODECAMER, D(CGAGAATTC(O6ME)GCG)2, CONTAINING A CARCINOGENIC O6-METHYLGUANINEX-ray diffraction2.91994-01-15
3271TGH|1|B+ 1TGH|1|CDNA (5'-D(*CP*GP*TP*AP*TP*AP*TP*AP*TP*AP*CP*G)-3')TATA BINDING PROTEIN (TBP)/DNA COMPLEXX-ray diffraction2.91996-08-01
3281VKX|1|C+ 1VKX|1|DDNA (5'-D(*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*CP*C)-3'), DNA (5'-D(*TP*GP*GP*GP*GP*AP*CP*TP*TP*TP*CP*C)-3')CRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNAX-ray diffraction2.91998-12-09
3293D4V|1|E+ 3D4V|1|F5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(FMG)P*DTP*DGP*DCP*DC)-3', 5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3'Crystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base PairX-ray diffraction2.92008-09-09
3303D4V|1|G+ 3D4V|1|H5'-D(*DGP*DAP*DCP*DAP*DTP*DGP*DAP*(FMG)P*DTP*DGP*DCP*DC)-3', 5'-D(*DGP*DGP*DCP*DAP*DCP*DTP*DCP*DAP*DTP*DGP*DTP*DC)-3'Crystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base PairX-ray diffraction2.92008-09-09
3313BNA|1|A+ 3BNA|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*(CBR)P*GP*CP*G)-3')REVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCGX-ray diffraction31982-04-15
332426D|1|A+ 426D|1|B5'-D(CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'THE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)X-ray diffraction31998-11-30
3331NDN|1|A+ 1NDN|1|B+ 1NDN|1|CDNA (5'-D(*CP*GP*CP*GP*AP*AP*AP*AP*CP*GP*CP*G)-3'), DNA (5'-D(*CP*GP*CP*GP*TP*T)-3'), DNA (5'-D(*TP*TP*CP*GP*CP*G)-3')MOLECULAR STRUCTURE OF NICKED DNA. MODEL T4X-ray diffraction31992-07-14
3341LE9|1|C+ 1LE9|1|D5'-D(*AP*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*C)-3', 5'-D(*TP*GP*GP*GP*AP*CP*TP*TP*TP*CP*CP*T)-3'Crystal structure of a NF-kB heterodimer bound to the Ig/HIV-kB sitiX-ray diffraction32003-04-15
3351LE9|1|H5'-D(*AP*AP*GP*GP*AP*AP*AP*GP*TP*CP*CP*C)-3'Crystal structure of a NF-kB heterodimer bound to the Ig/HIV-kB sitiX-ray diffraction32003-04-15
3361Q0T|1|C+ 1Q0T|1|D5'-D(*AP*CP*AP*GP*GP*AP*TP*CP*CP*TP*GP*T)-3'Ternary Structure of T4DAM with AdoHcy and DNAX-ray diffraction3.12003-09-23
3371EVW|1|EDNA (5'-D(*TP*GP*GP*CP*TP*AP*CP*CP*TP*TP*AP*A)-3')L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-ray diffraction3.12000-08-03
3381EVW|1|F+ 1EVW|1|MDNA (5'-D(*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3')L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-ray diffraction3.12000-08-03
3391EVW|1|G+ 1EVW|1|PDNA (5'-D(*TP*GP*GP*CP*TP*AP*CP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*GP*TP*AP*GP*CP*CP*A)-3')L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-ray diffraction3.12000-08-03
3401EVW|1|H+ 1EVW|1|NDNA (5'-D(*TP*GP*AP*CP*TP*CP*TP*CP*TP*TP*AP*A)-3'), DNA (5'-D(P*GP*AP*GP*AP*GP*TP*CP*A)-3')L116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-ray diffraction3.12000-08-03
3411C7Y|1|IDNA (5'-D(P*DCP*DAP*DAP*DTP*DCP*DCP*DCP*DAP*DAP*DCP*DTP*DT)-3')E.COLI RUVA-HOLLIDAY JUNCTION COMPLEXX-ray diffraction3.12000-07-21

Release history

Release0.10.20.30.40.5
Date2011-02-052011-02-122011-02-162011-02-192011-02-26

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLengthNAKB NA annotationNAKB protein annotation
11CLQ|1|D+ 1CLQ|1|ECRYSTAL STRUCTURE OF A REPLICATION FORK DNA POLYMERASE EDITING COMPLEX AT 2.7 A RESOLUTIONX-RAY DIFFRACTION2.712enzyme,polymerase,transferase
22AOQ|1|B+ 2AOQ|1|CCrystal structure of MutH-unmethylated DNA complexX-RAY DIFFRACTION2.212B-form double helix,double helix,structureDNA replication/repair,enzyme,hydrolase,nuclease,regulatory
31EVW|1|G+ 1EVW|1|PL116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-RAY DIFFRACTION3.112double helix,structureenzyme,hydrolase,nuclease
41EVW|1|EL116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-RAY DIFFRACTION3.112double helix,structureenzyme,hydrolase,nuclease
51EVW|1|H+ 1EVW|1|NL116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-RAY DIFFRACTION3.112double helix,structureenzyme,hydrolase,nuclease
61EVW|1|F+ 1EVW|1|ML116A MUTANT OF THE HOMING ENDONUCLEASE I-PPOI COMPLEXED TO HOMING SITE DNA.X-RAY DIFFRACTION3.112double helix,structureenzyme,hydrolase,nuclease
73ODH|1|G+ 3ODH|1|HStructure of OkrAI/DNA complexX-RAY DIFFRACTION2.312B-form double helix,double helix,structureenzyme,hydrolase,nuclease
83ODH|1|C+ 3ODH|1|DStructure of OkrAI/DNA complexX-RAY DIFFRACTION2.312B-form double helix,double helix,structureenzyme,hydrolase,nuclease
93BAM|1|C+ 3BAM|1|ERESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND MANGANESE IONS (POST-REACTIVE COMPLEX)X-RAY DIFFRACTION1.812B-form double helix,double helix,structureenzyme,hydrolase,nuclease
101BHM|1|C+ 1BHM|1|DRESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structureenzyme,hydrolase,nuclease
112BAM|1|C+ 2BAM|1|DRESTRICTION ENDONUCLEASE BAMHI COMPLEX WITH DNA AND CALCIUM IONS (PRE-REACTIVE COMPLEX).X-RAY DIFFRACTION212B-form double helix,double helix,structureenzyme,hydrolase,nuclease
121G3X|1|K+ 1G3X|1|LINTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
13249D|1|A+ 249D|1|BSTRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXESX-RAY DIFFRACTION2.2512B-form double helix,double helix,structure
14249D|1|C+ 249D|1|DSTRUCTURAL COMPARISON BETWEEN THE D(CTAG) SEQUENCE IN OLIGONUCLEOTIDES AND TRP AND MET REPRESSOR-OPERATOR COMPLEXESX-RAY DIFFRACTION2.2512B-form double helix,double helix,structure
151M0E|1|C+ 1M0E|1|DZEBULARINE: A NOVEL DNA METHYLATION INHIBITOR THAT FORMS A COVALENT COMPLEX WITH DNA METHYLTRANSFERASEX-RAY DIFFRACTION2.512B-form double helix,double helix,structureenzyme,methylase,transferase
162C7R|1|C+ 2C7R|1|DHhaI DNA methyltransferase (T250G mutant) complex with oligonucleotide containing 2-aminopurine as a target base (GPGC:GMGC) and SAHX-RAY DIFFRACTION1.912B-form double helix,double helix,structureenzyme,methylase,transferase
172C7P|1|C+ 2C7P|1|DHhaI DNA methyltransferase complex with oligonucleotide containing 2- aminopurine opposite to the target base (GCGC:GMPC) and SAHX-RAY DIFFRACTION1.712B-form double helix,double helix,structureenzyme,methylase,transferase
188MHT|1|C+ 8MHT|1|DCYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEXX-RAY DIFFRACTION2.7612B-form double helix,double helix,structureenzyme,methylase,transferase
197MHT|1|C+ 7MHT|1|DCYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEXX-RAY DIFFRACTION2.8712B-form double helix,double helix,structureenzyme,methylase,transferase
205MHT|1|C+ 5MHT|1|DTERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH HEMIMETHYLATED DNA AND ADOHCYX-RAY DIFFRACTION2.712B-form double helix,double helix,structureenzyme,methylase,transferase
216MHT|1|C+ 6MHT|1|DTERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND DNA CONTAINING 4'-THIO-2'DEOXYCYTIDINE AT THE TARGETX-RAY DIFFRACTION2.0512B-form double helix,double helix,structureenzyme,methylase,transferase
2210MH|1|B+ 10MH|1|CTERNARY STRUCTURE OF HHAI METHYLTRANSFERASE WITH ADOHCY AND HEMIMETHYLATED DNA CONTAINING 5,6-DIHYDRO-5-AZACYTOSINE AT THE TARGETX-RAY DIFFRACTION2.5512B-form double helix,double helix,structureenzyme,methylase,transferase
239MHT|1|C+ 9MHT|1|DCYTOSINE-SPECIFIC METHYLTRANSFERASE HHAI/DNA COMPLEXX-RAY DIFFRACTION2.3912B-form double helix,double helix,structureenzyme,methylase,transferase
243EEO|1|C+ 3EEO|1|DM. HhaI co-crystallized with synthetic dsDNA containing a propane diol in place of the deoxycytidine residue targeted for methylation.X-RAY DIFFRACTION1.9412double helix,structureenzyme,methylase,transferase
252Z6Q|1|C+ 2Z6Q|1|D+ 2Z6Q|1|ETernary structure of Arg165Ala M.HhaI C5-Cytosine DNA methyltransferase with unmodified DNA and AdoHcyX-RAY DIFFRACTION2.7912double helix,structureenzyme,methylase,transferase
261LRR|1|B+ 1LRR|1|CCRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNAX-RAY DIFFRACTION2.6512B-form double helix,double helix,structureDNA replication/repair,regulatory
271LRR|1|E+ 1LRR|1|FCRYSTAL STRUCTURE OF E. COLI SEQA COMPLEXED WITH HEMIMETHYLATED DNAX-RAY DIFFRACTION2.6512B-form double helix,double helix,structureDNA replication/repair,regulatory
282ER8|1|G+ 2ER8|1|HCrystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplexX-RAY DIFFRACTION2.8512B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,regulatory,transcription
292ER8|1|E+ 2ER8|1|FCrystal Structure of Leu3 DNA-binding domain complexed with a 12mer DNA duplexX-RAY DIFFRACTION2.8512B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,regulatory,transcription
30144D|1|A+ 144D|1|BMINOR GROOVE BINDING OF SN6999 TO AN ALKYLATED DNA: MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-SN6999 COMPLEXX-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
311D3R|1|C+ 1D3R|1|DCRYSTAL STRUCTURE OF TRIPLEX DNAX-RAY DIFFRACTION1.812structure,triple helix
321D3R|1|A+ 1D3R|1|BCRYSTAL STRUCTURE OF TRIPLEX DNAX-RAY DIFFRACTION1.812structure,triple helix
33478D|1|A+ 478D|1|BCRYSTAL STRUCTURE OF THE B-DNA DODECAMER 5'-D(CGCGAA(TAF)TCGCG), WHERE TAF IS 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINEX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
34477D|1|A+ 477D|1|BCALCIUM FORM OF THE B-DNA DODECAMER GGCGAATTCGCGX-RAY DIFFRACTION1.712B-form double helix,double helix,structure
35463D|1|A+ 463D|1|BCALCIUM FORM OF D(CGCGAATTCGCG)2X-RAY DIFFRACTION1.4512B-form double helix,DNA dodecamer,double helix,feature,structure
361EHV|1|AA NEW CRYSTAL STRUCTURE FOR THE DODECAMER C-G-C-G-A-A-T-T-C-G-C-G: SYMMETRY EFFECTS ON SEQUENCE-DEPENDENT DNA STRUCTUREX-RAY DIFFRACTION1.812B-form double helix,DNA dodecamer,double helix,feature,structure
372RF3|1|A+ 2RF3|1|BCrystal Structure of Tricyclo-DNA: An Unusual Compensatory Change of Two Adjacent Backbone Torsion AnglesX-RAY DIFFRACTION1.7512B-form double helix,DNA dodecamer,double helix,feature,structure
38426D|1|A+ 426D|1|BTHE STRUCTURE OF MOST STUDIED DNA FRAGMENT CHANGES UNDER THE INFLUENCE OF IONS: A NEW PACKING OF D(CGCGAATTCGCG)X-RAY DIFFRACTION312B-form double helix,DNA dodecamer,double helix,feature,structure
391N5C|1|ACrystal Structure Analysis of the B-DNA Dodecamer CGCGAATT(ethenoC)GCGX-RAY DIFFRACTION1.7912B-form double helix,double helix,structure
403EIL|1|A+ 3EIL|1|BStructure of B-DNA d(CGTTAATTAACG)2 in the presence of ManganeseX-RAY DIFFRACTION2.612B-form double helix,double helix,structure
413EIL|1|E+ 3EIL|1|FStructure of B-DNA d(CGTTAATTAACG)2 in the presence of ManganeseX-RAY DIFFRACTION2.612B-form double helix,double helix,structure
423EIL|1|C+ 3EIL|1|DStructure of B-DNA d(CGTTAATTAACG)2 in the presence of ManganeseX-RAY DIFFRACTION2.612B-form double helix,double helix,structure
431OE6|1|E+ 1OE6|1|FXenopus SMUG1, an anti-mutator uracil-DNA GlycosylaseX-RAY DIFFRACTION2.6512enzyme,hydrolase
441OE4|1|E+ 1OE4|1|FXenopus SMUG1, an anti-mutator uracil-DNA GlycosylaseX-RAY DIFFRACTION212B-form double helix,double helix,structureenzyme,hydrolase
452AHI|1|E+ 2AHI|1|FStructural Basis of DNA Recognition by p53 Tetramers (complex III)X-RAY DIFFRACTION1.8512B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
463D0A|1|E+ 3D0A|1|FHuman p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNAX-RAY DIFFRACTION1.812B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
472AC0|1|E+ 2AC0|1|FStructural Basis of DNA Recognition by p53 Tetramers (complex I)X-RAY DIFFRACTION1.812DNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
482ATA|1|E+ 2ATA|1|FStructural Basis of DNA Recognition by p53 Tetramers (complex II)X-RAY DIFFRACTION2.212DNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
491LE5|1|C+ 1LE5|1|DCrystal structure of a NF-kB heterodimer bound to an IFNb-kBX-RAY DIFFRACTION2.7512B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
501LE9|1|HCrystal structure of a NF-kB heterodimer bound to the Ig/HIV-kB sitiX-RAY DIFFRACTION312B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
511PP8|1|I+ 1PP8|1|Tcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-RAY DIFFRACTION3.0512B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
521PP8|1|E+ 1PP8|1|Gcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-RAY DIFFRACTION3.0512B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
531DNM|1|A+ 1DNM|1|BCRYSTAL STRUCTURE AND SEQUENCE-DEPENDENT CONFORMATION OF THE A.G MIS-PAIRED OLIGONUCLEOTIDE D(CGCAAGCTGGCG)X-RAY DIFFRACTION2.512B-form double helix,double helix,structure
542ZO2|1|D+ 2ZO2|1|EMouse NP95 SRA domain non-specific DNA complexX-RAY DIFFRACTION3.0912double helix,structureenzyme,ligase
551QP5|1|A+ 1QP5|1|BBASE-PAIRING SHIFT IN A DODECAMER CONTAINING A (CA)N TRACTX-RAY DIFFRACTION2.612B-form double helix,double helix,structure
56329D|1|A+ 329D|1|BEFFECT OF CYTOSINE METHYLATION ON DNA-DNA RECOGNITION AT CPG STEPSX-RAY DIFFRACTION2.712B-form double helix,double helix,structure
57330D|1|A+ 330D|1|BBASE-PAIRING SHIFT IN THE MAJOR GROOVE OF (CA)N TRACTS BY B-DNA CRYSTAL STRUCTURESX-RAY DIFFRACTION2.712B-form double helix,double helix,structure
581LE9|1|C+ 1LE9|1|DCrystal structure of a NF-kB heterodimer bound to the Ig/HIV-kB sitiX-RAY DIFFRACTION312B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
591LE5|1|G+ 1LE5|1|HCrystal structure of a NF-kB heterodimer bound to an IFNb-kBX-RAY DIFFRACTION2.7512B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
601C7Y|1|IE.COLI RUVA-HOLLIDAY JUNCTION COMPLEXX-RAY DIFFRACTION3.112enzyme,helicase,hydrolase
611FYM|1|DSERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATIONX-RAY DIFFRACTION2.212B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
623CO3|1|A+ 3CO3|1|BX-Ray Crystal Structure of a Monofunctional Platinum-DNA Adduct, cis-{Pt(NH3)2(pyridine)}2+ Bound to Deoxyguanosine in a Dodecamer DuplexX-RAY DIFFRACTION2.1612B-form double helix,double helix,structure
63423D|1|A+ 423D|1|B5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-RAY DIFFRACTION1.612B-form double helix,double helix,structure
643N7Q|1|B+ 3N7Q|1|CCrystal structure of human mitochondrial mTERF fragment (aa 99-399) in complex with a 12-mer DNA encompassing the tRNALeu(UUR) binding sequenceX-RAY DIFFRACTION2.412B-form double helix,double helix,structureRNA-binding transcription factor,regulatory,transcription
651HQ7|1|A+ 1HQ7|1|BCRYSTALLOGRAPHIC STUDIES OF A DODECAMER B-DNA D-(GCAAACGTTTGC)2X-RAY DIFFRACTION2.112B-form double helix,double helix,structure
661FYL|1|DSERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A HEAD-TO-HEAD ORIENTATIONX-RAY DIFFRACTION2.112B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
672O49|1|B+ 2O49|1|CCrystal Structure of the N-terminal CUT domain of SATB1 Bound to Matrix Attachment Region DNAX-RAY DIFFRACTION212B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),lambda repressor-like,regulatory,transcription
682O4A|1|B+ 2O4A|1|CCrystal Structure of the N-terminal CUT Domain of SATB1 Bound to Matrix Attachment Region DNAX-RAY DIFFRACTION1.7512B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),lambda repressor-like,regulatory,transcription
693I8D|1|BThe Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray CrystallographyX-RAY DIFFRACTION1.6112B-form double helix,double helix,structureenzyme,hydrolase,nuclease
703I8D|1|DThe Pairing Geometry of the Hydrophobic Thymine Analog 2,4-Difluorotoluene in Duplex DNA as Analyzed by X-ray CrystallographyX-RAY DIFFRACTION1.6112B-form double helix,double helix,structureenzyme,hydrolase,nuclease
713D0P|1|BInsights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complexX-RAY DIFFRACTION1.812B-form double helix,DNA dodecamer,double helix,feature,structureenzyme,hydrolase,nuclease
723D0P|1|DInsights into RNA/DNA hybrid recognition and processing by RNase H from the crystal structure of a non-specific enzyme-dsDNA complexX-RAY DIFFRACTION1.812B-form double helix,DNA dodecamer,double helix,feature,structureenzyme,hydrolase,nuclease
733EY1|1|BA Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structureenzyme,hydrolase,nuclease
743EY3|1|A+ 3EY3|1|BA Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-RAY DIFFRACTION1.2512B-form double helix,DNA dodecamer,double helix,feature,structure
753HTS|1|AHEAT SHOCK TRANSCRIPTION FACTOR/DNA COMPLEXX-RAY DIFFRACTION1.7512B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
762VLA|1|L+ 2VLA|1|MCrystal structure of restriction endonuclease BpuJI recognition domain in complex with cognate DNAX-RAY DIFFRACTION1.312B-form double helix,double helix,structureenzyme,hydrolase,nuclease
771NDN|1|A+ 1NDN|1|B+ 1NDN|1|CMOLECULAR STRUCTURE OF NICKED DNA. MODEL T4X-RAY DIFFRACTION312double helix,structure
782A66|1|B+ 2A66|1|CHuman Liver Receptor Homologue DNA-Binding Domain (hLRH-1 DBD) in Complex with dsDNA from the hCYP7A1 PromoterX-RAY DIFFRACTION2.212B-form double helix,double helix,structureDNA-binding transcription factor (TF),Zinc-coordinating,nuclear receptor ZnC4,regulatory,transcription
79119D|1|A+ 119D|1|BCRYSTAL AND MOLECULAR STRUCTURE OF D(CGTAGATCTACG) AT 2.25 ANGSTROMS RESOLUTIONX-RAY DIFFRACTION2.2512B-form double helix,double helix,structure
801Q0T|1|C+ 1Q0T|1|DTernary Structure of T4DAM with AdoHcy and DNAX-RAY DIFFRACTION3.112B-form double helix,double helix,structureenzyme,methylase,transferase
812P8D|1|BThe Structure of the Dickerson Sequence with an Incorporated CeNA ResidueX-RAY DIFFRACTION1.912B-form double helix,double helix,structure
821G3X|1|I+ 1G3X|1|JINTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
832P8D|1|AThe Structure of the Dickerson Sequence with an Incorporated CeNA ResidueX-RAY DIFFRACTION1.912B-form double helix,double helix,structure
843A4K|1|M+ 3A4K|1|NCrystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA and divalent cations at 2.17 angstrom resolutionX-RAY DIFFRACTION2.1712B-form double helix,double helix,structureenzyme,hydrolase,nuclease
852E52|1|I+ 2E52|1|JCrystal structural analysis of HindIII restriction endonuclease in complex with cognate DNA at 2.0 angstrom resolutionX-RAY DIFFRACTION212B-form double helix,double helix,structureenzyme,hydrolase,nuclease
861ILC|1|A+ 1ILC|1|BDNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.X-RAY DIFFRACTION2.212B-form double helix,double helix,structure
871ILC|1|E+ 1ILC|1|FDNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.X-RAY DIFFRACTION2.212B-form double helix,double helix,structure
881ILC|1|C+ 1ILC|1|DDNA Bending by an Adenine-Thymine Tract and Its Role in Gene Regulation.X-RAY DIFFRACTION2.212B-form double helix,double helix,structure
89424D|1|C+ 424D|1|D5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-RAY DIFFRACTION2.712B-form double helix,double helix,structure
90424D|1|A+ 424D|1|B5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-RAY DIFFRACTION2.712B-form double helix,double helix,structure
91425D|1|A+ 425D|1|B5'-D(*AP*CP*CP*GP*GP*TP*AP*CP*CP*GP*GP*T)-3'X-RAY DIFFRACTION2.812B-form double helix,double helix,structure
92424D|1|E+ 424D|1|F5'-D(*AP*CP*CP*GP*AP*CP*GP*TP*CP*GP*GP*T)-3'X-RAY DIFFRACTION2.712B-form double helix,double helix,structure
932B1D|1|C+ 2B1D|1|D5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3' Methionine Repressor binding siteX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
942B1D|1|A+ 2B1D|1|B5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3' Methionine Repressor binding siteX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
952B1D|1|E+ 2B1D|1|F5'-D(*GP*CP*AP*GP*AP*CP*GP*TP*CP*TP*GP*C)-3' Methionine Repressor binding siteX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
963EXJ|1|D+ 3EXJ|1|CCrystal Structure of a p53 Core Tetramer Bound to DNAX-RAY DIFFRACTION212B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
973EXL|1|D+ 3EXL|1|CCrystal Structure of a p53 Core Tetramer Bound to DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
981BDN|1|C+ 1BDN|1|DCRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACTX-RAY DIFFRACTION2.612B-form double helix,double helix,structure
991D89|1|E+ 1D89|1|FA DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BENDX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
1001D89|1|A+ 1D89|1|BA DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BENDX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
1011D89|1|C+ 1D89|1|DA DNA DODECAMER CONTAINING AN ADENINE TRACT CRYSTALLIZES IN A UNIQUE LATTICE AND EXHIBITS A NEW BENDX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
1023GA6|1|G+ 3GA6|1|HMth0212 in complex with two DNA helicesX-RAY DIFFRACTION1.89812double helix,feature,mispair,structureenzyme,hydrolase,nuclease
1033CVT|1|E+ 3CVT|1|FCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-RAY DIFFRACTION2.512enzyme,hydrolase
1043CW7|1|E+ 3CW7|1|FCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-RAY DIFFRACTION2.312enzyme,hydrolase
1053D4V|1|E+ 3D4V|1|FCrystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base PairX-RAY DIFFRACTION2.912enzyme,hydrolase
1063CWU|1|E+ 3CWU|1|FCrystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxy-1,N6-ethenoadenine:Thymine Base PairX-RAY DIFFRACTION2.812enzyme,hydrolase
1073CWS|1|E+ 3CWS|1|FCrystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Thymine Base PairX-RAY DIFFRACTION2.312enzyme,hydrolase
1083CWT|1|E+ 3CWT|1|FCrystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Adenine Base PairX-RAY DIFFRACTION2.312enzyme,hydrolase
1093CWA|1|E+ 3CWA|1|FCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-RAY DIFFRACTION2.412enzyme,hydrolase
1103OIE|1|A+ 3OIE|1|BCrystal structure of the DB1880-D(CGCGAATTCGCG)2 complexX-RAY DIFFRACTION1.912B-form double helix,DNA dodecamer,double helix,feature,structure
1111G3X|1|A+ 1G3X|1|BINTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
1121D85|1|A+ 1D85|1|BSTRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEXX-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
113128D|1|A+ 128D|1|BMOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG) COMPLEXED WITH HOECHST 33258X-RAY DIFFRACTION2.512DNA dodecamer,double helix,feature,structure
114130D|1|A+ 130D|1|BMOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG) COMPLEXED WITH HOECHST 33342X-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
1151G3X|1|C+ 1G3X|1|DINTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
1166BNA|1|A+ 6BNA|1|BBINDING OF AN ANTITUMOR DRUG TO DNA. NETROPSIN AND C-G-C-G-A-A-T-T-BRC-G-C-GX-RAY DIFFRACTION2.2112B-form double helix,DNA dodecamer,double helix,feature,structure
117101D|1|A+ 101D|1|BREFINEMENT OF NETROPSIN BOUND TO DNA: BIAS AND FEEDBACK IN ELECTRON DENSITY MAP INTERPRETATIONX-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
118449D|1|A+ 449D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-RAY DIFFRACTION2.112B-form double helix,DNA dodecamer,double helix,feature,structure
119448D|1|A+ 448D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
120447D|1|A+ 447D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
121442D|1|A+ 442D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
122443D|1|A+ 443D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'/ BENZIMIDAZOLE DERIVATIVE COMPLEXX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
123150D|1|A+ 150D|1|BGUANINE.1,N6-ETHENOADENINE BASE-PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(EDA)GCG)X-RAY DIFFRACTION2.2512B-form double helix,double helix,structure
1241D80|1|A+ 1D80|1|BCRYSTAL STRUCTURE OF AN OLIGONUCLEOTIDE DUPLEX CONTAINING G.G BASE-PAIRS: THE INFLUENCE OF MISPAIRING ON DNA BACKBONE CONFORMATIONX-RAY DIFFRACTION2.212B-form double helix,double helix,structure
1251D81|1|A+ 1D81|1|BTHE CONFORMATIONAL VARIABILITY OF AN ADENOSINE. INOSINE BASE-PAIR IN A SYNTHETIC DNA DODECAMERX-RAY DIFFRACTION2.512DNA dodecamer,feature,structure
126112D|1|A+ 112D|1|BMOLECULAR STRUCTURE OF THE G.A BASE PAIR IN DNA AND ITS IMPLICATIONS FOR THE MECHANISM OF TRANSVERSION MUTATIONSX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
127111D|1|A+ 111D|1|BCRYSTAL STRUCTURE AND STABILITY OF A DNA DUPLEX CONTAINING A(ANTI).G(SYN) BASE-PAIRSX-RAY DIFFRACTION2.2512B-form double helix,double helix,structure
128114D|1|A+ 114D|1|BINOSINE-ADENINE BASE PAIRS IN A B-DNA DUPLEXX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
129178D|1|A+ 178D|1|BCRYSTAL STRUCTURE OF A DNA DUPLEX CONTAINING 8-HYDROXYDEOXYGUANINE.ADENINE BASE-PAIRSX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
1301D75|1|A+ 1D75|1|BCONFORMATION OF THE GUANINE.8-OXOADENINE BASE PAIRS IN THE CRYSTAL STRUCTURE OF D(CGCGAATT(O8A)GCG)X-RAY DIFFRACTION2.812B-form double helix,double helix,structure
1311DNE|1|A+ 1DNE|1|BMOLECULAR STRUCTURE OF THE NETROPSIN-D(CGCGATATCGCG) COMPLEX: DNA CONFORMATION IN AN ALTERNATING AT SEGMENT; CONFORMATION 2X-RAY DIFFRACTION2.412B-form double helix,double helix,structure
132121D|1|A+ 121D|1|BMOLECULAR STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR GROOVE BINDING DRUG NETROPSINX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
1332DND|1|A+ 2DND|1|BA BIFURCATED HYDROGEN-BONDED CONFORMATION IN THE D(A.T) BASE PAIRS OF THE DNA DODECAMER D(CGCAAATTTGCG) AND ITS COMPLEX WITH DISTAMYCINX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
1342DPC|1|A+ 2DPC|1|BCrystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-O-methyluridineX-RAY DIFFRACTION1.5512B-form double helix,DNA dodecamer,double helix,feature,structure
1352DPB|1|A+ 2DPB|1|BCrystal Structure of d(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridineX-RAY DIFFRACTION1.512B-form double helix,DNA dodecamer,double helix,feature,structure
1361I47|1|A+ 1I47|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNAX-RAY DIFFRACTION2.112B-form double helix,DNA dodecamer,double helix,feature,structure
1371I3T|1|A+ 1I3T|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATT(MO4)CGCG): THE WATSON-CRICK TYPE AND WOBBLE N4-METHOXYCYTIDINE/GUANOSINE BASE PAIRS IN B-DNAX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
1384BNA|1|A+ 4BNA|1|BREVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCGX-RAY DIFFRACTION2.312B-form double helix,DNA dodecamer,double helix,feature,structure
139403D|1|A+ 403D|1|B5'-D(*CP*GP*CP*(HYD)AP*AP*AP*TP*TP*TP*GP*CP*G)-3', 2'-(4-ETHOXYPHENYL)-5-(4-METHYL-1-PIPERAZINYL)-2,5'-BI-BENZIMIDAZOLEX-RAY DIFFRACTION1.412B-form double helix,double helix,structure
1403GJH|1|A+ 3GJH|1|BCrystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-oneX-RAY DIFFRACTION2.912B-form double helix,double helix,structure
141113D|1|A+ 113D|1|BTHE STRUCTURE OF GUANOSINE-THYMIDINE MISMATCHES IN B-DNA AT 2.5 ANGSTROMS RESOLUTIONX-RAY DIFFRACTION2.512B-form double helix,double helix,feature,mispair,structure
1421D99|1|A+ 1D99|1|BSTRUCTURAL FEATURES AND HYDRATION OF A DODECAMER DUPLEX CONTAINING TWO C.A MISPAIRSX-RAY DIFFRACTION2.512B-form double helix,double helix,feature,mispair,structure
1431D86|1|A+ 1D86|1|BSTRUCTURAL CONSEQUENCES OF A CARCINOGENIC ALKYLATION LESION ON DNA: EFFECT OF O6-ETHYL-GUANINE ON THE MOLECULAR STRUCTURE OF D(CGC[E6G]AATTCGCG)-NETROPSIN COMPLEXX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
144296D|1|A+ 296D|1|BSEQUENCE-DEPENDENT EFFECTS IN DRUG-DNA INTERACTION: THE CRYSTAL STRUCTURE OF HOECHST 33258 BOUND TO THE D(CGCAAATTTGCG)2 DUPLEXX-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
1451D63|1|A+ 1D63|1|BCRYSTAL STRUCTURE OF A BERENIL-D(CGCAAATTTGCG) COMPLEX; AN EXAMPLE OF DRUG-DNA RECOGNITION BASED ON SEQUENCE-DEPENDENT STRUCTURAL FEATURESX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
146298D|1|A+ 298D|1|BTARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
147328D|1|A+ 328D|1|BSTRUCTURE OF A D(CGCGAATTCGCG)2-SN7167 COMPLEXX-RAY DIFFRACTION2.612B-form double helix,DNA dodecamer,double helix,feature,structure
148109D|1|A+ 109D|1|BVARIABILITY IN DNA MINOR GROOVE WIDTH RECOGNISED BY LIGAND BINDING: THE CRYSTAL STRUCTURE OF A BIS-BENZIMIDAZOLE COMPOUND BOUND TO THE DNA DUPLEX D(CGCGAATTCGCG)2X-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
1498BNA|1|A+ 8BNA|1|BBINDING OF HOECHST 33258 TO THE MINOR GROOVE OF B-DNAX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
150129D|1|A+ 129D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH HOECHST 33342X-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
151290D|1|A+ 290D|1|BCRYSTAL STRUCTURES OF OLIGODEOXYRIBONUCLEOTIDES CONTAINING 6'-ALPHA-METHYL AND 6'-ALPHA-HYDROXY CARBOCYCLIC THYMIDINESX-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
1521D65|1|A+ 1D65|1|BMOLECULAR STRUCTURE OF THE B-DNA DODECAMER D(CGCAAATTTGCG)2; AN EXAMINATION OF PROPELLER TWIST AND MINOR-GROOVE WATER STRUCTURE AT 2.2 ANGSTROMS RESOLUTIONX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
153102D|1|A+ 102D|1|BSEQUENCE-DEPENDENT DRUG BINDING TO THE MINOR GROOVE OF DNA: THE CRYSTAL STRUCTURE OF THE DNA DODECAMER D(CGCAAATTTGCG)2 COMPLEXED WITH PROPAMIDINEX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
154263D|1|A+ 263D|1|BISOHELICITY AND PHASING IN DRUG-DNA SEQUENCE RECOGNITION: CRYSTAL STRUCTURE OF A TRIS(BENZIMIDAZOLE)-OLIGONUCLEOTIDE COMPLEXX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
155264D|1|A+ 264D|1|BTHREE-DIMENSIONAL CRYSTAL STRUCTURE OF THE A-TRACT DNA DODECAMER D(CGCAAATTTGCG) COMPLEXED WITH THE MINOR-GROOVE-BINDING DRUG HOECHST 33258X-RAY DIFFRACTION2.4412B-form double helix,DNA dodecamer,double helix,feature,structure
1561DNH|1|A+ 1DNH|1|BTHE MOLECULAR STRUCTURE OF THE COMPLEX OF HOECHST 33258 AND THE DNA DODECAMER D(CGCGAATTCGCG)X-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
157127D|1|A+ 127D|1|BDNA (5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3') COMPLEXED WITH HOECHST 33258X-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
1583GJJ|1|A+ 3GJJ|1|Bcrystal structure of a DNA duplex containing 7,8-dihydropyridol[2,3-d]pyrimidin-2-oneX-RAY DIFFRACTION2.912B-form double helix,double helix,structure
1593N4O|1|D+ 3N4O|1|EInsights into the stabilizing contributions of a bicyclic cytosine analogue: crystal structures of DNA duplexes containing 7,8-dihydropyrido[2,3-d]pyrimidin-2-oneX-RAY DIFFRACTION2.912B-form double helix,double helix,structure
160265D|1|A+ 265D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION2.0112B-form double helix,DNA dodecamer,double helix,feature,structure
161269D|1|A+ 269D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION2.1512B-form double helix,DNA dodecamer,double helix,feature,structure
1621D44|1|A+ 1D44|1|BDNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE DOWNX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
1631D43|1|A+ 1D43|1|BDNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX: 0 DEGREES C, PIPERAZINE UPX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
1641D46|1|A+ 1D46|1|BDNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-100 DEGREES C, PIPERAZINE DOWNX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
1651D45|1|A+ 1D45|1|BDNA DODECAMER C-G-C-G-A-A-T-T-C-G-C-G/HOECHST 33258 COMPLEX:-25 DEGREES C, PIPERAZINE DOWNX-RAY DIFFRACTION1.912B-form double helix,DNA dodecamer,double helix,feature,structure
1661D30|1|A+ 1D30|1|BTHE STRUCTURE OF DAPI BOUND TO DNAX-RAY DIFFRACTION2.412B-form double helix,DNA dodecamer,double helix,feature,structure
167445D|1|A+ 445D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', Benzimidazole derivative complexX-RAY DIFFRACTION2.612B-form double helix,DNA dodecamer,double helix,feature,structure
168444D|1|A+ 444D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3', BENZIMIDAZOLE DERIVATIVE COMPLEXX-RAY DIFFRACTION2.412B-form double helix,DNA dodecamer,double helix,feature,structure
1691QV4|1|A+ 1QV4|1|BB-DNA Dodecamer CGTGAATTCACG complexed with minor groove binder methylproamineX-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
1701QV8|1|A+ 1QV8|1|BB-DNA Dodecamer d(CGCGAATTCGCG)2 complexed with proamineX-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
171311D|1|A+ 311D|1|BTHE ROLE OF HYDROGEN BONDING IN MINOR-GROOVE DRUG-DNA RECOGNITION. STRUCTURE OF A BIS-AMIDINIUM DERIVATIVE OF HOECHST 33258 COMPLEXED TO THE DODECANUCLEOTIDE D(CGCGAATTCGCG)2X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
1721EEL|1|A+ 1EEL|1|BSTRUCTURE OF A COMPLEX BETWEEN THE DNA SEQUENCE DCGCGAATTCGCG AND BIS[PIPERIDINO-ETHYL]-FURAMIDINEX-RAY DIFFRACTION2.412B-form double helix,DNA dodecamer,double helix,feature,structure
173289D|1|A+ 289D|1|BTARGETING THE MINOR GROOVE OF DNA: CRYSTAL STRUCTURES OF TWO COMPLEXES BETWEEN FURAN DERIVATIVES OF BERENIL AND THE DNA DODECAMER D(CGCGAATTCGCG)2X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
1741FMQ|1|A+ 1FMQ|1|BCyclo-butyl-bis-furamidine complexed with dCGCGAATTCGCGX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
175291D|1|A+ 291D|1|BCRYSTAL STRUCTURES OF OLIGODEOXYRIBONUCLEOTIDES CONTAINING 6'-ALPHA-METHYL AND 6'-ALPHA-HYDROXY CARBOCYCLIC THYMIDINESX-RAY DIFFRACTION2.1412B-form double helix,DNA dodecamer,double helix,feature,structure
176227D|1|A+ 227D|1|BA CRYSTALLOGRAPHIC AND SPECTROSCOPIC STUDY OF THE COMPLEX BETWEEN D(CGCGAATTCGCG)2 AND 2,5-BIS(4-GUANYLPHENYL)FURAN, AN ANALOGUE OF BERENIL. STRUCTURAL ORIGINS OF ENHANCED DNA-BINDING AFFINITYX-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
1772DBE|1|A+ 2DBE|1|BCRYSTAL STRUCTURE OF A BERENIL-DODECANUCLEOTIDE COMPLEX: THE ROLE OF WATER IN SEQUENCE-SPECIFIC LIGAND BINDINGX-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
178302D|1|A+ 302D|1|BMETA-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL IN' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
179303D|1|A+ 303D|1|BMETA-HYDROXY ANALOGUE OF HOECHST 33258 ('HYDROXYL OUT' CONFORMATION) BOUND TO D(CGCGAATTCGCG)2X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
1801PRP|1|A+ 1PRP|1|BCRYSTAL STRUCTURE OF D(CGCGAATTCGCG) COMPLEXED WITH PROPAMIDINE, A SHORT-CHAIN HOMOLOGUE OF THE DRUG PENTAMIDINX-RAY DIFFRACTION2.112B-form double helix,DNA dodecamer,double helix,feature,structure
1811D64|1|A+ 1D64|1|BCRYSTAL STRUCTURE OF A PENTAMIDINE-OLIGONUCLEOTIDE COMPLEX: IMPLICATIONS FOR DNA-BINDING PROPERTIESX-RAY DIFFRACTION2.112B-form double helix,DNA dodecamer,double helix,feature,structure
1821DN9|1|A+ 1DN9|1|BSTRUCTURE OF AN ALTERNATING-B DNA HELIX AND ITS RELATIONSHIP TO A-TRACT DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structure
183459D|1|A+ 459D|1|BDNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUGX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
184194D|1|A+ 194D|1|BX-RAY STRUCTURES OF THE B-DNA DODECAMER D(CGCGTTAACGCG) WITH AN INVERTED CENTRAL TETRANUCLEOTIDE AND ITS NETROPSIN COMPLEXX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
185195D|1|A+ 195D|1|BX-RAY STRUCTURES OF THE B-DNA DODECAMER D(CGCGTTAACGCG) WITH AN INVERTED CENTRAL TETRANUCLEOTIDE AND ITS NETROPSIN COMPLEXX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
1861BDN|1|A+ 1BDN|1|BCRYSTAL LATTICE PACKING IS IMPORTANT IN DETERMINING THE BEND OF A DNA DODECAMER CONTAINING AN ADENINE TRACTX-RAY DIFFRACTION2.612B-form double helix,double helix,structure
187267D|1|A+ 267D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
1881D98|1|A+ 1D98|1|BTHE STRUCTURE OF AN OLIGO(DA).OLIGO(DT) TRACT AND ITS BIOLOGICAL IMPLICATIONSX-RAY DIFFRACTION2.512B-form double helix,DNA dodecamer,double helix,feature,structure
1891NGT|1|A+ 1NGT|1|BThe Role of Minor Groove Functional Groups in DNA HydrationX-RAY DIFFRACTION2.0412B-form double helix,DNA dodecamer,double helix,feature,structure
1901D29|1|A+ 1D29|1|BCRYSTAL STRUCTURE ANALYSIS OF THE B-DNA DODECAMER CGTGAATTCACGX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
1911D28|1|A+ 1D28|1|BCRYSTAL AND MOLECULAR STRUCTURE OF A DNA FRAGMENT: D(CGTGAATTCACG)X-RAY DIFFRACTION2.712B-form double helix,double helix,structure
192233D|1|A+ 233D|1|BTHE CRYSTAL STRUCTURE ANALYSIS OF D(CGCGAASSCGCG)2: A SYNTHETIC DNA DODECAMER DUPLEX CONTAINING FOUR 4'-THIO-2'-DEOXYTHYMIDINE NUCLEOTIDESX-RAY DIFFRACTION2.412B-form double helix,DNA dodecamer,double helix,feature,structure
1933BNA|1|A+ 3BNA|1|BREVERSIBLE BENDING AND HELIX GEOMETRY IN A B-DNA DODECAMER: CGCGAATTBRCGCGX-RAY DIFFRACTION312B-form double helix,DNA dodecamer,double helix,feature,structure
1941D27|1|A+ 1D27|1|BHIGH-RESOLUTION STRUCTURE OF A MUTAGENIC LESION IN DNAX-RAY DIFFRACTION212B-form double helix,double helix,structure
195268D|1|A+ 268D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION2.0212B-form double helix,DNA dodecamer,double helix,feature,structure
196266D|1|A+ 266D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION2.0312B-form double helix,DNA dodecamer,double helix,feature,structure
1971D77|1|A+ 1D77|1|BCRYSTAL STRUCTURE OF A B-DNA DODECAMER CONTAINING INOSINE, D(CGCIAATTCGCG), AT 2.4 ANGSTROMS RESOLUTION AND ITS COMPARISON WITH OTHER B-DNA DODECAMERSX-RAY DIFFRACTION2.412B-form double helix,double helix,structure
1981BNA|1|A+ 1BNA|1|BSTRUCTURE OF A B-DNA DODECAMER. CONFORMATION AND DYNAMICSX-RAY DIFFRACTION1.912B-form double helix,DNA dodecamer,double helix,feature,structure
1997BNA|1|A+ 7BNA|1|BANISOTROPIC THERMAL-PARAMETER REFINEMENT OF THE DNA DODECAMER CGCGAATTCGCG BY THE SEGMENTED RIGID-BODY METHODX-RAY DIFFRACTION1.912B-form double helix,DNA dodecamer,double helix,feature,structure
200166D|1|A+ 166D|1|BDRUG-DNA MINOR GROOVE RECOGNITION: CRYSTAL STRUCTURE OF GAMMA-OXAPENTAMIDINE COMPLEXED WITH D(CGCGAATTCGCG)2X-RAY DIFFRACTION2.212B-form double helix,DNA dodecamer,double helix,feature,structure
2019BNA|1|A+ 9BNA|1|BRE-REFINEMENT OF THE B-DODECAMER D(CGCGAATTCGCG) WITH A COMPARATIVE ANALYSIS OF THE SOLVENT IN IT AND IN THE Z-HEXAMER D(5BRCG5BRCG5BRCG)X-RAY DIFFRACTION1.912B-form double helix,DNA dodecamer,double helix,feature,structure
202270D|1|A+ 270D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION2.0112B-form double helix,DNA dodecamer,double helix,feature,structure
2032GYX|1|A+ 2GYX|1|BCrystal structure of DB884- D(CGCGAATTCGCG)2 complex at 1.86 A resolution.X-RAY DIFFRACTION1.8612B-form double helix,DNA dodecamer,double helix,feature,structure
2041J8L|1|A+ 1J8L|1|BMolecular and Crystal Structure of D(CGCAAATTMO4CGCG): the Watson-Crick Type N4-Methoxycytidine/Adenosine Base Pair in B-DNAX-RAY DIFFRACTION1.612B-form double helix,double helix,structure
2051ZPH|1|A+ 1ZPH|1|BCrystal structure analysis of the minor groove binding quinolinium quaternary salt SN 8315 complexed with CGCGAATTCGCGX-RAY DIFFRACTION1.812B-form double helix,DNA dodecamer,double helix,feature,structure
2061ZPI|1|A+ 1ZPI|1|BCrystal structure analysis of the minor groove binding quinolinium quaternary salt SN 8224 complexed with CGCGAATTCGCGX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
2071LEX|1|A+ 1LEX|1|BSTRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 1)X-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
2081LEY|1|A+ 1LEY|1|BSTRUCTURE OF A DICATIONIC MONOIMIDAZOLE LEXITROPSIN BOUND TO DNA (ORIENTATION 2)X-RAY DIFFRACTION2.2512B-form double helix,DNA dodecamer,double helix,feature,structure
209360D|1|A+ 360D|1|BSTRUCTURE OF 2,5-BIS{[4-(N-ETHYLAMIDINO)PHENYL]}FURAN COMPLEXED TO 5'-D(CPGPCPGPAPAPTPTPCPGPCPG)-3'. A MINOR GROOVE DRUG COMPLEX, SHOWING PATTERNS OF GROOVE HYDRATIONX-RAY DIFFRACTION1.8512B-form double helix,DNA dodecamer,double helix,feature,structure
2102B0K|1|A+ 2B0K|1|BCrystal structure of the DB921-D(CGCGAATTCGCG)2 complex.X-RAY DIFFRACTION1.6412B-form double helix,DNA dodecamer,double helix,feature,structure
2112I5A|1|A+ 2I5A|1|BCrystal structure of a DB1055-D(CGCGAATTCGCG)2 complexX-RAY DIFFRACTION1.6512B-form double helix,DNA dodecamer,double helix,feature,structure
2122B3E|1|A+ 2B3E|1|BCrystal structure of DB819-D(CGCGAATTCGCG)2 complex.X-RAY DIFFRACTION1.3612B-form double helix,DNA dodecamer,double helix,feature,structure
2131M6F|1|A+ 1M6F|1|BStrong Binding in the DNA Minor Groove by an Aromatic Diamidine With a Shape That Does Not Match the Curvature of the GrooveX-RAY DIFFRACTION1.7812B-form double helix,DNA dodecamer,double helix,feature,structure
2142I2I|1|A+ 2I2I|1|BCrystal structure of the DB293-D(CGCGAATTCGCG)2 complex.X-RAY DIFFRACTION1.6312B-form double helix,DNA dodecamer,double helix,feature,structure
2152GVR|1|A+ 2GVR|1|BCrystal structure of the berenil-D(CGCGAATTCGCG)2 complex at 1.65 A resolution.X-RAY DIFFRACTION1.6512B-form double helix,DNA dodecamer,double helix,feature,structure
216285D|1|A+ 285D|1|BX-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATUREX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
217297D|1|A+ 297D|1|BX-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATUREX-RAY DIFFRACTION2.512B-form double helix,double helix,structure
2182BNA|1|A+ 2BNA|1|BSTRUCTURE OF A B-DNA DODECAMER AT 16 KELVINX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
2192NLM|1|A+ 2NLM|1|BCrystal structure of the DB 911- D(CGCGAATTCGCG)2 complex at 2.05 A resolution.X-RAY DIFFRACTION2.0512B-form double helix,DNA dodecamer,double helix,feature,structure
220436D|1|A+ 436D|1|BTHE DICKERSON-DREW B-DNA DODECAMER REVISITED-AT ATOMIC RESOLUTIONX-RAY DIFFRACTION1.112B-form double helix,DNA dodecamer,double helix,feature,structure
2211DPN|1|A+ 1DPN|1|BB-DODECAMER CGCGAA(TAF)TCGCG WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINEX-RAY DIFFRACTION0.9512B-form double helix,DNA dodecamer,double helix,feature,structure
222460D|1|A+ 460D|1|BA "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVEX-RAY DIFFRACTION1.212B-form double helix,DNA dodecamer,double helix,feature,structure
223461D|1|A+ 461D|1|BA "HYDRAT-ION SPINE" IN A B-DNA MINOR GROOVEX-RAY DIFFRACTION1.512B-form double helix,DNA dodecamer,double helix,feature,structure
224389D|1|A+ 389D|1|BCRYSTAL STRUCTURE OF B-DNA WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINES: IMPLICATIONS OF CONFORMATIONAL PREORGANIZATION FOR DUPLEX STABILITYX-RAY DIFFRACTION1.5512B-form double helix,DNA dodecamer,double helix,feature,structure
225388D|1|A+ 388D|1|BCRYSTAL STRUCTURE OF B-DNA WITH INCORPORATED 2'-DEOXY-2'-FLUORO-ARABINO-FURANOSYL THYMINES: IMPLICATIONS OF CONFORMATIONAL PREORGANIZATION FOR DUPLEX STABILITYX-RAY DIFFRACTION1.5512B-form double helix,DNA dodecamer,double helix,feature,structure
226271D|1|A+ 271D|1|BSTRUCTURAL STUDIES ON NUCLEIC ACIDSX-RAY DIFFRACTION2.0212B-form double helix,DNA dodecamer,double helix,feature,structure
2272FII|1|A+ 2FII|1|BCrystal Structure Analysis of the B-DNA Dodecamer CGCGAAT-aU-CGCG, with Incorporated Arabino-Uridin (aU)X-RAY DIFFRACTION1.2412B-form double helix,DNA dodecamer,double helix,feature,structure
2281G8N|1|A+ 1G8N|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-RAY DIFFRACTION1.5512B-form double helix,DNA dodecamer,double helix,feature,structure
2291G75|1|A+ 1G75|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG): 5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-RAY DIFFRACTION1.5712B-form double helix,DNA dodecamer,double helix,feature,structure
2302FIH|1|A+ 2FIH|1|BCrystal Structure Analysis of the B-DNA Dodecamer CGCGAA-aU-TCGCG, with Incorporated Arabino-Uridine (aU)X-RAY DIFFRACTION1.1312B-form double helix,DNA dodecamer,double helix,feature,structure
2312DP7|1|A+ 2DP7|1|BCrystal Structure of D(CGCGAATXCGCG) Where X is 5-(N-aminohexyl)carbamoyl-2'-deoxyuridineX-RAY DIFFRACTION1.5512B-form double helix,DNA dodecamer,double helix,feature,structure
2321EI4|1|A+ 1EI4|1|BB-DNA DODECAMER CGCGAAT(TLC)CGCG WITH INCORPORATED [3.3.0]BICYCLO-ARABINO-THYMINE-5'-PHOSPHATEX-RAY DIFFRACTION1.4312B-form double helix,DNA dodecamer,double helix,feature,structure
2331FTD|1|A+ 1FTD|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'-SYMMETRIC BIS-BENZIMIDAZOLE COMPLEXX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
234453D|1|A+ 453D|1|B5'-D(*CP*GP*CP*GP*AP*AP*TP*TP*CP*GP*CP*G)-3'-BENZIMIDAZOLE COMPLEXX-RAY DIFFRACTION1.812B-form double helix,DNA dodecamer,double helix,feature,structure
2351VZK|1|A+ 1VZK|1|BA Thiophene Based Diamidine Forms a "Super" AT Binding Minor Groove AgentX-RAY DIFFRACTION1.7712B-form double helix,DNA dodecamer,double helix,feature,structure
2361FMS|1|A+ 1FMS|1|BStructure of complex between cyclohexyl-bis-furamidine and d(CGCGAATTCGCG)X-RAY DIFFRACTION1.912B-form double helix,DNA dodecamer,double helix,feature,structure
237456D|1|A+ 456D|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATCCGCG): THE WATSON-CRICK TYPE N6-METHOXYADENOSINE/CYTIDINE BASE-PAIRS IN B-DNAX-RAY DIFFRACTION1.612B-form double helix,double helix,structure
2381N1O|1|A+ 1N1O|1|BCrystal Structure of a B-form DNA Duplex Containing (L)-alpha-threofuranosyl (3'-2') Nucleosides: A Four-Carbon Sugar is Easily Accommodated into the Backbone of DNAX-RAY DIFFRACTION1.212B-form double helix,DNA dodecamer,double helix,feature,structure
239355D|1|A+ 355D|1|BTHE B-DNA DODECAMER AT HIGH RESOLUTIONX-RAY DIFFRACTION1.412B-form double helix,DNA dodecamer,double helix,feature,structure
240428D|1|A+ 428D|1|BSTRUCTURE OF THE POTASSIUM FORM OF CGCGAATTCGCG: DNA DEFORMATION BY ELECTROSTATIC COLLAPSE AROUND SMALL CATIONSX-RAY DIFFRACTION1.7512B-form double helix,DNA dodecamer,double helix,feature,structure
2411DOU|1|A+ 1DOU|1|BMONOVALENT CATIONS SEQUESTER WITHIN THE A-TRACT MINOR GROOVE OF [D(CGCGAATTCGCG)]2X-RAY DIFFRACTION1.8212B-form double helix,DNA dodecamer,double helix,feature,structure
2421FQ2|1|A+ 1FQ2|1|BCRYSTAL STRUCTURE ANALYSIS OF THE POTASSIUM FORM OF B-DNA DODECAMER CGCGAATTCGCGX-RAY DIFFRACTION1.212B-form double helix,DNA dodecamer,double helix,feature,structure
2431JGR|1|A+ 1JGR|1|BCrystal Structure Analysis of the B-DNA Dodecamer CGCGAATTCGCG with Thallium Ions.X-RAY DIFFRACTION1.212B-form double helix,DNA dodecamer,double helix,feature,structure
2441EDR|1|A+ 1EDR|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG) AT 1.6 ANGSTROMX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
245457D|1|A+ 457D|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGMO6AATTCGCG): N6-METHOXYADENOSINE/ THYMIDINE BASE-PAIRS IN B-DNAX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
2461LP7|1|A+ 1LP7|1|BCrystal Structure of a Non-Self Complementary DNA Dodecamer Containing an A/T Tract: Analysis of the Effect of Crystal Environment on Local Helical ParametersX-RAY DIFFRACTION2.412B-form double helix,double helix,structure
247458D|1|A+ 458D|1|BDNA MINOR-GROOVE RECOGNITION OF A TRIS-BENZIMIDAZOLE DRUG BY A NON-SELF-COMPLEMENTARY AT-RICH SEQUENCEX-RAY DIFFRACTION2.312B-form double helix,double helix,structure
2485BNA|1|A+ 5BNA|1|BTHE PRIMARY MODE OF BINDING OF CISPLATIN TO A B-DNA DODECAMER: C-G-C-G-A-A-T-T-C-G-C-GX-RAY DIFFRACTION2.612B-form double helix,DNA dodecamer,double helix,feature,structure
2494DNB|1|A+ 4DNB|1|BMETHYLATION OF THE ECORI RECOGNITION SITE DOES NOT ALTER DNA CONFORMATION. THE CRYSTAL STRUCTURE OF D(CGCGAM6ATTCGCG) AT 2.0 ANGSTROMS RESOLUTIONX-RAY DIFFRACTION212B-form double helix,DNA dodecamer,double helix,feature,structure
250455D|1|A+ 455D|1|BA6/A18 INTER-STRAND DITHIOBIS(PROPANE)-CROSSLINKED DODECAMER (CGCGAATTCGCG)2X-RAY DIFFRACTION1.4312B-form double helix,DNA dodecamer,double helix,feature,structure
251287D|1|A+ 287D|1|BX-RAY AND SOLUTION STUDIES OF DNA OLIGOMERS AND IMPLICATIONS FOR THE STRUCTURAL BASIS OF A-TRACT-DEPENDENT CURVATUREX-RAY DIFFRACTION2.212B-form double helix,double helix,structure
2521G3X|1|G+ 1G3X|1|HINTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
2532DYW|1|A+ 2DYW|1|BA Backbone binding DNA complexX-RAY DIFFRACTION1.1312B-form double helix,DNA dodecamer,double helix,feature,structure
2541Z5T|1|A+ 1Z5T|1|BCrystal Structure of [d(CGCGAA(Z3dU)(Z3dU)CGCG)]2, Z3dU:5-(3-aminopropyl)-2'-deoxyuridine, in presence of thallium I.X-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
2552QEF|1|A+ 2QEF|1|BX-ray structure of 7-deaza-dG and Z3dU modified duplex CGCGAATXCZCGX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
2561G8V|1|A+ 1G8V|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-RAY DIFFRACTION1.812B-form double helix,DNA dodecamer,double helix,feature,structure
2571G8U|1|A+ 1G8U|1|BMOLECULAR AND CRYSTAL STRUCTURE OF D(CGCGAATF5UCGCG):5-FORMYLURIDINE/ ADENOSINE BASE-PAIRS IN B-DNAX-RAY DIFFRACTION1.8512B-form double helix,DNA dodecamer,double helix,feature,structure
2581VE8|1|A+ 1VE8|1|BX-Ray analyses of oligonucleotides containing 5-formylcytosine, suggesting a structural reason for codon-anticodon recognition of mitochondrial tRNA-Met; Part 1, d(CGCGAATT(f5C)GCG)X-RAY DIFFRACTION1.6512B-form double helix,DNA dodecamer,double helix,feature,structure
2592QEG|1|A+ 2QEG|1|BB-DNA with 7-deaza-dG modificationX-RAY DIFFRACTION1.612B-form double helix,DNA dodecamer,double helix,feature,structure
2601S2R|1|A+ 1S2R|1|BA High Resolution Crystal Structure of [d(CGCAAATTTGCG)]2X-RAY DIFFRACTION1.5312B-form double helix,DNA dodecamer,double helix,feature,structure
2613EY3|1|C+ 3EY3|1|DA Conformational Transition in the Structure of a 2'-Thiomethyl-Modified DNA Visualized at High ResolutionX-RAY DIFFRACTION1.2512B-form double helix,DNA dodecamer,double helix,feature,structure
2621G3X|1|E+ 1G3X|1|FINTERCALATION OF AN 9ACRIDINE-PEPTIDE DRUG IN A DNA DODECAMERX-RAY DIFFRACTION2.712B-form double helix,DNA dodecamer,double helix,feature,structure
2633M4A|1|D+ 3M4A|1|ECrystal structure of a bacterial topoisomerase IB in complex with DNA reveals a secondary DNA binding siteX-RAY DIFFRACTION1.6512B-form double helix,double helix,structureenzyme,isomerase
2643CVS|1|G+ 3CVS|1|HCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Adenine Base PairX-RAY DIFFRACTION2.412enzyme,hydrolase
2653CVS|1|E+ 3CVS|1|FCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Adenine Base PairX-RAY DIFFRACTION2.412enzyme,hydrolase
2663CW7|1|G+ 3CW7|1|HCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-RAY DIFFRACTION2.312enzyme,hydrolase
2673CVT|1|G+ 3CVT|1|HCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-RAY DIFFRACTION2.512enzyme,hydrolase
2683CWA|1|G+ 3CWA|1|HCrystal Structure of an AlkA Host/Guest Complex 8oxoGuanine:Cytosine Base PairX-RAY DIFFRACTION2.412enzyme,hydrolase
2693CWT|1|G+ 3CWT|1|HCrystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Adenine Base PairX-RAY DIFFRACTION2.312enzyme,hydrolase
2703CWS|1|G+ 3CWS|1|HCrystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxyinosine:Thymine Base PairX-RAY DIFFRACTION2.312enzyme,hydrolase
2713CWU|1|G+ 3CWU|1|HCrystal Structure of an AlkA Host/Guest Complex 2'-fluoro-2'-deoxy-1,N6-ethenoadenine:Thymine Base PairX-RAY DIFFRACTION2.812enzyme,hydrolase
2723D4V|1|G+ 3D4V|1|HCrystal Structure of an AlkA Host/Guest Complex N7MethylGuanine:Cytosine Base PairX-RAY DIFFRACTION2.912enzyme,hydrolase
273218D|1|A+ 218D|1|BTHE STRUCTURE OF A NEW CRYSTAL FORM OF A DNA DODECAMER CONTAINING T.(O6ME)G BASE PAIRSX-RAY DIFFRACTION2.2512B-form double helix,double helix,structure
274153D|1|A+ 153D|1|BCRYSTAL STRUCTURE OF A MISPAIRED DODECAMER, D(CGAGAATTC(O6ME)GCG)2, CONTAINING A CARCINOGENIC O6-METHYLGUANINEX-RAY DIFFRACTION2.912B-form double helix,double helix,structure
2753GA6|1|D+ 3GA6|1|FMth0212 in complex with two DNA helicesX-RAY DIFFRACTION1.89812double helix,feature,mispair,structureenzyme,hydrolase,nuclease
2761FYL|1|CSERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A HEAD-TO-HEAD ORIENTATIONX-RAY DIFFRACTION2.112B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
2771FYM|1|CSERENDIPITOUS CRYSTAL STRUCTURE CONTAINING THE HEAT SHOCK TRANSCRIPTION FACTOR'S DNA BINDING DOMAIN AND COGNATE DNA IN A TAIL-TO-TAIL ORIENTATIONX-RAY DIFFRACTION2.212B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
2783JX7|1|B+ 3JX7|1|CBacillus cereus alkylpurine DNA glycosylase AlkD bound to DNA containing a 3-METHYLADENINE analogX-RAY DIFFRACTION1.612B-form double helix,double helix,structureenzyme,hydrolase
2793JXY|1|B+ 3JXY|1|CBacillus cereus Alkylpurine DNA Glycosylase AlkD Bound to DNA Containing a GT MismatchX-RAY DIFFRACTION1.512double helix,feature,mispair,structureenzyme,hydrolase
2802ADY|1|E+ 2ADY|1|FStructural Basis of DNA Recognition by p53 Tetramers (complex IV)X-RAY DIFFRACTION2.512B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
2812ATA|1|G+ 2ATA|1|HStructural Basis of DNA Recognition by p53 Tetramers (complex II)X-RAY DIFFRACTION2.212DNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
2822AC0|1|G+ 2AC0|1|HStructural Basis of DNA Recognition by p53 Tetramers (complex I)X-RAY DIFFRACTION1.812DNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
2833D0A|1|G+ 3D0A|1|HHuman p53 core domain with hot spot mutation R249S and second site suppressor mutation H168R in sequence-specific complex with DNAX-RAY DIFFRACTION1.812B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
2842AHI|1|G+ 2AHI|1|HStructural Basis of DNA Recognition by p53 Tetramers (complex III)X-RAY DIFFRACTION1.8512B-form double helix,double helix,structureDNA-binding transcription factor (TF),P53 like,immunoglobulin (Ig) fold,regulatory,transcription
2851PP8|1|R+ 1PP8|1|Ycrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-RAY DIFFRACTION3.0512B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
2861PP8|1|J+ 1PP8|1|Kcrystal structure of the T. vaginalis IBP39 Initiator binding domain (IBD) bound to the alpha-SCS Inr elementX-RAY DIFFRACTION3.0512B-form double helix,double helix,structureDNA-binding transcription factor (TF),helix-turn-helix (HTH),regulatory,transcription,winged helix/forkhead
2873OH6|1|C+ 3OH6|1|BAlkA Undamaged DNA Complex: Interrogation of a C:G base pairX-RAY DIFFRACTION2.89412double helix,structureenzyme,hydrolase
2882H27|1|E+ 2H27|1|FCrystal Structure of Escherichia coli SigmaE Region 4 Bound to its-35 Element DNAX-RAY DIFFRACTION2.312B-form double helix,double helix,structureregulatory,transcription
2892H27|1|B+ 2H27|1|CCrystal Structure of Escherichia coli SigmaE Region 4 Bound to its-35 Element DNAX-RAY DIFFRACTION2.312B-form double helix,double helix,structureregulatory,transcription
2903LWM|1|B+ 3LWM|1|CStructure of the large fragment of thermus aquaticus DNA polymerase I in complex with a blunt-ended DNA and ddATPX-RAY DIFFRACTION2.18612B-form double helix,double helix,structureenzyme,polymerase,transferase
2911DC0|1|A+ 1DC0|1|BCRYSTAL STRUCTURE OF AN A/B-DNA INTERMEDIATE CATGGGCCCATGX-RAY DIFFRACTION1.312A-form double helix,double helix,structure
2921ODG|1|WVery-short-patch DNA repair endonuclease bound to its reaction product siteX-RAY DIFFRACTION2.812enzyme,hydrolase,nuclease
2931VKX|1|C+ 1VKX|1|DCRYSTAL STRUCTURE OF THE NFKB P50/P65 HETERODIMER COMPLEXED TO THE IMMUNOGLOBULIN KB DNAX-RAY DIFFRACTION2.912B-form double helix,double helix,structureDNA-binding transcription factor (TF),immunoglobulin (Ig) fold,regulatory,rel homology,transcription
2942ZKD|1|E+ 2ZKD|1|FCrystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-RAY DIFFRACTION1.612B-form double helix,double helix,structureenzyme,ligase
2952ZKD|1|C+ 2ZKD|1|DCrystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-RAY DIFFRACTION1.612B-form double helix,double helix,structureenzyme,ligase
2962ZKE|1|C+ 2ZKE|1|DCrystal structure of the SRA domain of mouse Np95 in complex with hemi-methylated CpG DNAX-RAY DIFFRACTION2.612B-form double helix,double helix,structureenzyme,ligase
2972XCT|1|Y+ 2XCT|1|VThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-RAY DIFFRACTION3.3512double helix,structureenzyme,isomerase
2982XCT|1|H+ 2XCT|1|EThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-RAY DIFFRACTION3.3512double helix,structureenzyme,isomerase
2992XCT|1|G+ 2XCT|1|FThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-RAY DIFFRACTION3.3512double helix,structureenzyme,isomerase
3002XCT|1|X+ 2XCT|1|WThe twinned 3.35A structure of S. aureus Gyrase complex with Ciprofloxacin and DNAX-RAY DIFFRACTION3.3512double helix,structureenzyme,isomerase
3012I5W|1|E+ 2I5W|1|FStructure of hOGG1 crosslinked to DNA sampling a normal G adjacent to an oxoGX-RAY DIFFRACTION2.612enzyme,hydrolase
3022OPF|1|B+ 2OPF|1|CCrystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrateX-RAY DIFFRACTION1.8512B-form double helix,double helix,structureenzyme,hydrolase,nuclease
3032EA0|1|B+ 2EA0|1|CCrystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli in complex with AP-site containing DNA substrateX-RAY DIFFRACTION1.412B-form double helix,double helix,structureenzyme,hydrolase,nuclease
3042OFI|1|B+ 2OFI|1|CCrystal Structure of 3-methyladenine DNA Glycosylase I (TAG) bound to DNA/3mAX-RAY DIFFRACTION1.8512B-form double helix,double helix,structureenzyme,hydrolase
3051EOO|1|C+ 1EOO|1|DECORV BOUND TO COGNATE DNAX-RAY DIFFRACTION2.1612B-form double helix,double helix,structureenzyme,hydrolase,nuclease
3061R2Z|1|B+ 1R2Z|1|CMutM (Fpg) bound to 5,6-dihydrouracil (DHU) containing DNAX-RAY DIFFRACTION1.6312double helix,structureenzyme,hydrolase
3071R2Y|1|B+ 1R2Y|1|CMutM (Fpg) bound to 8-oxoguanine (oxoG) containing DNAX-RAY DIFFRACTION2.3412B-form double helix,double helix,structureenzyme,hydrolase
3081EOP|1|C+ 1EOP|1|DECORV BOUND TO COGNATE DNAX-RAY DIFFRACTION2.612B-form double helix,double helix,structureenzyme,hydrolase,nuclease
309363D|1|FHigh-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-RAY DIFFRACTION212double helix,structure
310363D|1|CHigh-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-RAY DIFFRACTION212double helix,structure
311363D|1|BHigh-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-RAY DIFFRACTION212double helix,structure
312363D|1|EHigh-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-RAY DIFFRACTION212double helix,structure
313363D|1|AHigh-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-RAY DIFFRACTION212double helix,structure
314363D|1|DHigh-resolution crystal structure of a fully modified N3'-> P5' phosphoramidate DNA dodecamer duplexX-RAY DIFFRACTION212double helix,structure
3151IHH|1|A+ 1IHH|1|B2.4 ANGSTROM CRYSTAL STRUCTURE OF AN OXALIPLATIN 1,2-D(GPG) INTRASTRAND CROSS-LINK IN A DNA DODECAMER DUPLEXX-RAY DIFFRACTION2.412DNA dodecamer,double helix,feature,structure
3161AIO|1|C+ 1AIO|1|DCRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA CONTAINING THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATINX-RAY DIFFRACTION2.612DNA dodecamer,double helix,feature,structure
3171AIO|1|A+ 1AIO|1|BCRYSTAL STRUCTURE OF A DOUBLE-STRANDED DNA CONTAINING THE MAJOR ADDUCT OF THE ANTICANCER DRUG CISPLATINX-RAY DIFFRACTION2.612DNA dodecamer,double helix,feature,structure
3181LU5|1|C+ 1LU5|1|D2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA DuplexX-RAY DIFFRACTION2.412DNA dodecamer,double helix,feature,structure
3193LPV|1|C+ 3LPV|1|DX-ray crystal structure of duplex DNA containing a cisplatin 1,2-d(GpG) intrastrand cross-linkX-RAY DIFFRACTION1.7712DNA dodecamer,double helix,feature,structure
3203LPV|1|A+ 3LPV|1|BX-ray crystal structure of duplex DNA containing a cisplatin 1,2-d(GpG) intrastrand cross-linkX-RAY DIFFRACTION1.7712DNA dodecamer,double helix,feature,structure
3211LU5|1|A+ 1LU5|1|B2.4 Angstrom Crystal Structure of the Asymmetric Platinum Complex {Pt(ammine)(cyclohexylamine)}2+ Bound to a Dodecamer DNA DuplexX-RAY DIFFRACTION2.412DNA dodecamer,double helix,feature,structure
3221QPH|1|ACRYSTAL STRUCTURE OF THE A-DNA DODECAMER GACCACGTGGTCX-RAY DIFFRACTION2.512A-form double helix,double helix,structure
323117D|1|ACRYSTAL AND MOLECULAR STRUCTURE OF THE ALTERNATING DODECAMER D(GCGTACGTACGC) IN THE A-DNA FORM: COMPARISON WITH THE ISOMORPHOUS NON-ALTERNATING DODECAMER D(CCGTACGTACGG)X-RAY DIFFRACTION2.5512A-form double helix,double helix,structure
324116D|1|ACRYSTAL AND MOLECULAR STRUCTURE OF THE A-DNA DODECAMER D(CCGTACGTACGG): CHOICE OF FRAGMENT HELICAL AXISX-RAY DIFFRACTION2.512A-form double helix,double helix,structure
3252D47|1|A+ 2D47|1|BMOLECULAR STRUCTURE OF A COMPLETE TURN OF A-DNAX-RAY DIFFRACTION212A-form double helix,double helix,structure
3261ZJE|1|A+ 1ZJE|1|B12mer-spdX-RAY DIFFRACTION2.112A-form double helix,double helix,structure
3271ZJF|1|A+ 1ZJF|1|B12mer-spd-P4NX-RAY DIFFRACTION2.212A-form double helix,double helix,structure
3281TGH|1|B+ 1TGH|1|CTATA BINDING PROTEIN (TBP)/DNA COMPLEXX-RAY DIFFRACTION2.912double helix,structureβ-sheet,DNA-binding transcription factor (TF),TATA binding protein,regulatory,transcription
3291CW0|1|M+ 1CW0|1|OCRYSTAL STRUCTURE ANALYSIS OF VERY SHORT PATCH REPAIR (VSR) ENDONUCLEASE IN COMPLEX WITH A DUPLEX DNAX-RAY DIFFRACTION2.312B-form double helix,double helix,feature,mispair,structureenzyme,hydrolase,nuclease
3303CLZ|1|E+ 3CLZ|1|FThe set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structureenzyme,ligase
3313CLZ|1|G+ 3CLZ|1|HThe set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structureenzyme,ligase
3323CLZ|1|K+ 3CLZ|1|LThe set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structureenzyme,ligase
3333CLZ|1|I+ 3CLZ|1|JThe set and ring associated (SRA) domain of UHRF1 bound to methylated DNAX-RAY DIFFRACTION2.212B-form double helix,double helix,structureenzyme,ligase
3343F8I|1|D+ 3F8I|1|EMouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group P21X-RAY DIFFRACTION2.2912B-form double helix,double helix,structureenzyme,ligase
3353FDE|1|D+ 3FDE|1|EMouse UHRF1 SRA domain bound with hemi-methylated CpG DNA, crystal structure in space group C222(1) at 1.4 A resolutionX-RAY DIFFRACTION1.4112B-form double helix,double helix,structureenzyme,ligase
3363F8I|1|F+ 3F8I|1|GMouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group P21X-RAY DIFFRACTION2.2912B-form double helix,double helix,structureenzyme,ligase
3373F8J|1|F+ 3F8J|1|GMouse UHRF1 SRA domain bound with hemi-methylated CpG, crystal structure in space group C222(1)X-RAY DIFFRACTION1.9912B-form double helix,double helix,structureenzyme,ligase
3383FDE|1|C+ 3FDE|1|FMouse UHRF1 SRA domain bound with hemi-methylated CpG DNA, crystal structure in space group C222(1) at 1.4 A resolutionX-RAY DIFFRACTION1.4112B-form double helix,double helix,structureenzyme,ligase
3393HQG|1|BCrystal structure of restriction endonuclease EcoRII catalytic C-terminal domain in complex with cognate DNAX-RAY DIFFRACTION2.612double helix,structureenzyme,hydrolase,nuclease
3401MWJ|1|DCrystal Structure of a MUG-DNA pseudo substrate complexX-RAY DIFFRACTION2.8512enzyme,hydrolase
3411MWI|1|DCrystal structure of a MUG-DNA product complexX-RAY DIFFRACTION2.3512enzyme,hydrolase

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.