#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14MSR|1|A+ 4MSR|1|B (rep)RNA 10mer duplex with six 2'-5'-linkagesRNA 10mer duplex with six 2'-5'-linkagesX-ray diffraction1.22014-02-12
25TDJ|1|ARNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3')synthetic constructRNA decamer duplex with four 2'-5'-linkagesX-ray diffraction1.52017-01-11
34MS9|1|ANative RNA duplex 10merNative RNA-10mer Structure: ccggcgccggX-ray diffraction1.322014-02-12
45TDK|1|A+ 5TDK|1|BRNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3')synthetic constructRNA decamer duplex with eight 2'-5'-linkagesX-ray diffraction1.432017-01-11
55TDJ|1|BRNA (5'-R(*CP*CP*GP*GP*CP*GP*CP*CP*GP*G)-3')synthetic constructRNA decamer duplex with four 2'-5'-linkagesX-ray diffraction1.52017-01-11

Release history

Release2.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.123
Date2017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_1.5_97195.1NR_1.5_61679.12.110(2) 4MS9|1|A, 4MSR|1|A+4MSR|1|B(3) 5TDJ|1|A, 5TDJ|1|B, 5TDK|1|A+5TDK|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_1.5_97195.1NR_1.5_47763.12.124(5) 4MS9|1|A, 4MSR|1|A+4MSR|1|B, 5TDJ|1|A, 5TDJ|1|B, 5TDK|1|A+5TDK|1|B(0) (0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14MS9|1|ANative RNA-10mer Structure: ccggcgccggX-RAY DIFFRACTION1.3210
25TDJ|1|ARNA decamer duplex with four 2'-5'-linkagesX-RAY DIFFRACTION1.510
35TDJ|1|BRNA decamer duplex with four 2'-5'-linkagesX-RAY DIFFRACTION1.510
45TDK|1|A+ 5TDK|1|BRNA decamer duplex with eight 2'-5'-linkagesX-RAY DIFFRACTION1.4310
54MSR|1|A+ 4MSR|1|BRNA 10mer duplex with six 2'-5'-linkagesX-RAY DIFFRACTION1.212

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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