#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11A34|B (rep)SATELLITE TOBACCO MOSAIC VIRUS/RNA COMPLEXX-ray diffraction1.811998-04-29
21EFO|BCRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)X-ray diffraction2.32000-05-29
31G4Q|ARNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTGX-ray diffraction1.152003-07-08
41JB8|AThe Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular IntercalationX-ray diffraction2.382003-07-01
51OO7|ADNA.RNA HYBRID DUPLEX CONTAINING A 5-PROPYNE DNA STRAND AND PURINE-RICH RNA STRAND, NMR, 4 STRUCTURESSolution NMR2003-11-11
61PJG|ARNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTGX-ray diffraction1.152003-12-09
71PJO|ACrystal Structure of an RNA/DNA hybrid of HIV-1 PPTX-ray diffraction1.12003-12-09
81R9S|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MATCHED NUCLEOTIDEX-ray diffraction4.252004-11-16
91R9T|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEX, MISMATCHED NUCLEOTIDEX-ray diffraction3.52004-11-16
101RRD|ADNA/RNA HYBRID DUPLEX CONTAINING A PURINE-RICH RNA STRAND, NMR, 10 STRUCTURESSolution NMR1998-04-22
111RRR|ARNA DUPLEX CONTAINING A PURINE-RICH STRAND, NMR, 10 STRUCTURESSolution NMR1998-04-22
121SFO|RRNA POLYMERASE II STRAND SEPARATED ELONGATION COMPLEXX-ray diffraction3.612004-03-02
131Y1W|PComplete RNA Polymerase II elongation complexX-ray diffraction42005-01-04
141Y77|PComplete RNA Polymerase II elongation complex with substrate analogue GMPCPPX-ray diffraction4.52005-01-04
152E2H|RRNA polymerase II elongation complex at 5 mM Mg2+ with GTPX-ray diffraction3.952006-12-12
162E2I|RRNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dGTPX-ray diffraction3.412006-12-19
172JA5|Psynthetic constructCPD lesion containing RNA Polymerase II elongation complex AX-ray diffraction3.82007-02-20
182JA6|Psynthetic constructCPD lesion containing RNA Polymerase II elongation complex BX-ray diffraction42007-02-20
192JA7|3synthetic constructCPD lesion containing RNA Polymerase II elongation complex CX-ray diffraction3.82007-02-20
202JA8|Psynthetic constructCPD lesion containing RNA Polymerase II elongation complex DX-ray diffraction3.82007-02-20
212NVQ|Rsynthetic constructRNA Polymerase II Elongation Complex in 150 mM Mg+2 with 2'dUTPX-ray diffraction2.92006-12-12
222NVT|RRNA Polymerase II Elongation Complex in 150 mM Mg+2 with GMPCPPX-ray diffraction3.362006-12-12
232NVX|RRNA polymerase II elongation complex in 5 mM Mg+2 with 2'-dUTPX-ray diffraction3.62006-12-19
242NVZ|Rsynthetic constructRNA Polymerase II elongation complex with UTP, updated 11/2006X-ray diffraction4.32006-12-19
252R7Z|PCisplatin lesion containing RNA polymerase II elongation complexX-ray diffraction3.82007-11-20
262VUM|Psynthetic constructAlpha-amanitin inhibited complete RNA polymerase II elongation complexX-ray diffraction3.42008-06-17
272YU9|Rsynthetic constructRNA polymerase II elongation complex in 150 mm MG+2 with UTPX-ray diffraction3.42007-04-24
283HOV|PComplete RNA polymerase II elongation complex IIX-ray diffraction3.52009-07-28
293HOX|PComplete RNA polymerase II elongation complex VX-ray diffraction3.652009-07-28
303HOY|PComplete RNA polymerase II elongation complex VIX-ray diffraction3.42009-07-28
313I4M|P8-oxoguanine containing RNA polymerase II elongation complex DX-ray diffraction3.72009-09-08
323I4N|P8-oxoguanine containing RNA polymerase II elongation complex EX-ray diffraction3.92009-09-08
333M4O|RRNA polymerase II elongation complex BX-ray diffraction3.572010-05-12
34404D|ACRYSTAL STRUCTURE OF THE RNA/DNA HYBRID R(GAAGAGAAGC). D(GCTTCTCTTC)X-ray diffraction2.51998-12-14
354BY1|Psynthetic constructelongating RNA Polymerase II-Bye1 TLD complex soaked with AMPCPPX-ray diffraction3.62013-09-11
364BY7|Psynthetic constructelongating RNA Polymerase II-Bye1 TLD complexX-ray diffraction3.152013-09-11
374NIA|PTobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined at room temperature to 1.8 A Resolution using NCS RestraintsX-ray diffraction1.822014-09-10
384OQ8|BTobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using icosahedral constraintsX-ray diffraction1.452014-09-10
394OQ9|PTobacco virtovirus 1Satellite Tobacco Mosaic Virus Refined to 1.4 A Resolution using non-crystallographic symmetry restraintsX-ray diffraction1.452014-09-10

Release history

Release1.771.781.791.801.811.821.831.841.851.861.87
Date2014-09-122014-09-192014-09-262014-10-032014-10-102014-10-172014-10-242014-10-312014-11-072014-11-142014-11-21

Parents

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Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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