#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16Q1H|1|D (rep)RNA (5'-R(P*AP*AP*A)-3')Pseudomonas aeruginosaStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-ray diffraction1.452019-12-25
26Q1H|1|HRNA (5'-R(P*AP*AP*A)-3')Pseudomonas aeruginosaStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-ray diffraction1.452019-12-25
36P7P|1|FCyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-ray diffraction1.662019-12-25
46P7P|1|ECyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-ray diffraction1.662019-12-25
56P7P|1|DCyclic tri-AMP (5'-3' linked)Escherichia coliStructure of E. coli MS115-1 NucC, cAAA-bound formX-ray diffraction1.662019-12-25
63GPQ|1|ERNA (5'-R(*AP*AP*A)-3')Crystal structure of macro domain of Chikungunya virus in complex with RNAX-ray diffraction22009-07-21
73GPQ|1|FRNA (5'-R(*AP*AP*A)-3')Crystal structure of macro domain of Chikungunya virus in complex with RNAX-ray diffraction22009-07-21

Release history

Release3.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.130
Date2019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_09544.1NR_2.5_22826.33.106(2) 3GPQ|1|E, 3GPQ|1|F(5) 6P7P|1|D, 6P7P|1|E, 6P7P|1|F, 6Q1H|1|D, 6Q1H|1|H(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_09544.1NR_2.5_65223.13.131(7) 3GPQ|1|E, 3GPQ|1|F, 6P7P|1|D, 6P7P|1|E, 6P7P|1|F, 6Q1H|1|D, 6Q1H|1|H(0) (11) 6VM6|1|G, 6VM6|1|H, 6VM6|1|I, 6VM6|1|J, 6VM6|1|K, 6WAN|1|G, 6WAN|1|H, 6WAN|1|I, 6WAN|1|J, 6WAN|1|K, 6WAN|1|L

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16Q1H|1|HStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.453
26Q1H|1|DStructure of P. aeruginosa ATCC27853 NucC, cAAA-bound formX-RAY DIFFRACTION1.453
36P7P|1|DStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
46P7P|1|EStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
56P7P|1|FStructure of E. coli MS115-1 NucC, cAAA-bound formX-RAY DIFFRACTION1.663
63GPQ|1|ECrystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22
73GPQ|1|FCrystal structure of macro domain of Chikungunya virus in complex with RNAX-RAY DIFFRACTION22

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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