Equivalence class NR_2.5_27561.2 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 2HOJ|A (rep) | Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, manganese ions | X-ray diffraction | 2.5 | 2006-09-19 | |||||
| 2 | 2HOK|A | Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, calcium ions | X-ray diffraction | 3.2 | 2006-09-19 | |||||
| 3 | 2HOL|A | Crystal structure of an E. coli thi-box riboswitch bound to thiamine pyrophosphate, barium ions | X-ray diffraction | 2.9 | 2006-09-19 | |||||
| 4 | 2HOM|A | Crystal structure of an E. coli thi-box riboswitch bound to thiamine monophosphate | X-ray diffraction | 2.89 | 2006-09-19 | |||||
| 5 | 2HOO|A | Crystal structure of an E. coli thi-box riboswitch bound to benfotiamine | X-ray diffraction | 3 | 2006-09-19 | |||||
| 6 | 2HOP|A | Crystal structure of an E. coli thi-box riboswitch bound to pyrithiamine | X-ray diffraction | 3.3 | 2006-09-19 | |||||
| 7 | 3K0J|E | Crystal structure of the E. coli ThiM riboswitch in complex with thiamine pyrophosphate and the U1A crystallization module | X-ray diffraction | 3.1 | 2009-12-22 |
Release history
| Release | 0.16 | 0.17 | 0.18 | 0.19 | 0.20 | 0.21 | 0.22 | 0.23 | 0.24 | 0.25 | 0.26 | 0.27 | 0.28 | 0.29 | 0.30 | 0.31 | 0.32 | 0.33 | 0.34 | 0.35 | 0.36 | 0.37 | 0.38 | 0.39 | 0.40 | 0.41 | 0.42 | 0.43 | 0.44 | 0.45 | 0.46 | 0.47 | 0.48 | 0.49 | 0.50 | 0.51 | 0.52 | 0.53 | 0.54 | 0.55 | 0.56 | 0.57 | 0.58 | 0.59 | 0.60 | 0.61 | 0.62 | 0.63 | 0.64 | 0.65 | 0.66 | 0.67 | 0.68 | 0.69 | 0.70 | 0.71 | 0.72 | 0.73 | 0.74 | 0.75 | 0.76 | 0.77 | 0.78 | 0.79 | 0.80 | 0.81 | 0.82 | 0.83 | 0.84 | 0.85 | 0.86 | 0.87 | 0.88 | 0.89 | 0.90 | 0.91 | 0.92 | 0.93 | 0.94 | 0.95 | 0.96 | 0.97 | 0.98 | 0.99 | 0.100 | 0.101 | 0.102 | 0.103 | 0.104 | 0.105 | 0.106 | 0.107 | 0.108 | 0.109 | 0.110 | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 | 1.5 | 1.6 | 1.7 | 1.8 | 1.9 | 1.10 | 1.11 | 1.12 | 1.13 | 1.14 | 1.15 | 1.16 | 1.17 | 1.18 | 1.19 | 1.20 | 1.21 | 1.22 | 1.23 | 1.24 | 1.25 | 1.26 | 1.27 | 1.28 | 1.29 | 1.30 | 1.31 | 1.32 | 1.33 | 1.34 | 1.35 | 1.36 | 1.37 | 1.38 | 1.39 | 1.40 | 1.41 | 1.42 | 1.43 | 1.44 | 1.45 | 1.46 | 1.47 | 1.48 | 1.49 | 1.50 | 1.51 | 1.52 | 1.53 | 1.54 | 1.55 | 1.56 | 1.57 | 1.58 | 1.59 | 1.60 | 1.61 | 1.62 | 1.63 |
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| Date | 2011-05-07 | 2011-05-14 | 2011-05-21 | 2011-05-28 | 2011-06-04 | 2011-06-11 | 2011-06-18 | 2011-06-25 | 2011-07-02 | 2011-07-09 | 2011-07-16 | 2011-07-23 | 2011-07-30 | 2011-08-06 | 2011-08-13 | 2011-08-20 | 2011-08-27 | 2011-09-03 | 2011-09-10 | 2011-09-17 | 2011-09-24 | 2011-10-01 | 2011-10-08 | 2011-10-15 | 2011-10-22 | 2011-10-29 | 2011-11-05 | 2011-11-12 | 2011-11-19 | 2011-11-26 | 2011-12-03 | 2011-12-10 | 2011-12-17 | 2011-12-24 | 2011-12-31 | 2012-01-07 | 2012-01-14 | 2012-01-21 | 2012-01-28 | 2012-02-04 | 2012-02-11 | 2012-02-18 | 2012-02-25 | 2012-03-03 | 2012-03-10 | 2012-03-17 | 2012-03-24 | 2012-03-31 | 2012-04-07 | 2012-04-14 | 2012-04-21 | 2012-04-28 | 2012-05-05 | 2012-05-12 | 2012-05-19 | 2012-05-26 | 2012-06-02 | 2012-06-09 | 2012-06-16 | 2012-06-23 | 2012-06-30 | 2012-07-07 | 2012-07-14 | 2012-07-21 | 2012-07-28 | 2012-08-04 | 2012-08-11 | 2012-08-18 | 2012-08-25 | 2012-09-01 | 2012-09-08 | 2012-09-15 | 2012-09-22 | 2012-09-29 | 2012-10-06 | 2012-10-13 | 2012-10-20 | 2012-10-27 | 2012-11-03 | 2012-11-10 | 2012-11-17 | 2012-11-24 | 2012-12-01 | 2012-12-08 | 2012-12-15 | 2012-12-22 | 2012-12-29 | 2013-01-05 | 2013-01-12 | 2013-01-19 | 2013-01-26 | 2013-02-02 | 2013-02-09 | 2013-02-16 | 2013-02-23 | 2013-03-02 | 2013-03-09 | 2013-03-16 | 2013-03-23 | 2013-03-30 | 2013-04-06 | 2013-04-13 | 2013-04-20 | 2013-04-27 | 2013-05-04 | 2013-05-11 | 2013-05-18 | 2013-05-25 | 2013-06-01 | 2013-06-08 | 2013-06-15 | 2013-06-22 | 2013-06-29 | 2013-07-06 | 2013-07-13 | 2013-07-20 | 2013-07-27 | 2013-08-03 | 2013-08-10 | 2013-08-17 | 2013-08-24 | 2013-08-31 | 2013-09-07 | 2013-09-14 | 2013-09-21 | 2013-09-28 | 2013-10-05 | 2013-10-12 | 2013-10-19 | 2013-10-26 | 2013-11-09 | 2013-11-16 | 2013-11-23 | 2013-11-30 | 2013-12-07 | 2013-12-14 | 2013-12-21 | 2013-12-28 | 2014-01-04 | 2014-01-11 | 2014-01-18 | 2014-01-25 | 2014-02-01 | 2014-02-08 | 2014-02-15 | 2014-02-22 | 2014-03-01 | 2014-03-08 | 2014-03-17 | 2014-03-22 | 2014-03-29 | 2014-04-05 | 2014-04-12 | 2014-04-19 | 2014-04-26 | 2014-05-03 | 2014-05-10 | 2014-05-17 | 2014-05-31 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
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Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: