#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15NEP|1|A (rep)RNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidineX-ray diffraction1.62017-05-31
25NEX|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatineX-ray diffraction1.722017-05-31
35NEO|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loopX-ray diffraction1.692017-05-31
45NEQ|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidineX-ray diffraction1.692017-05-31
55NEF|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidineX-ray diffraction1.912017-06-07
65NOM|1|ARNA (5'-R(*GP*GP*UP*GP*GP*GP*GP*AP*CP*GP*AP*CP*CP*CP*CP*AP*(CBV)P*C)-3')Gloeobacter violaceusThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidineX-ray diffraction1.932017-05-31

Release history

Release2.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.1583.03.13.23.33.43.53.63.73.83.93.103.113.123.133.143.153.163.173.183.193.203.213.223.233.243.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.433.443.453.463.473.483.493.503.513.523.533.543.553.563.573.583.593.603.61
Date2017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-082017-12-152017-12-222017-12-292018-01-052018-01-122018-01-192018-01-262018-02-022018-02-092018-02-162018-02-232018-03-012018-03-082018-03-152018-03-222018-03-292018-04-062018-04-132018-04-202018-04-272018-05-042018-05-112018-05-182018-05-252018-06-012018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-122018-10-192018-10-262018-11-022018-11-092018-11-162018-11-232018-11-302018-12-072018-12-142018-12-212018-12-282019-01-042019-01-112019-01-182019-01-252019-02-012019-02-082019-02-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_2.5_91124.2NR_2.5_91124.12.131(5) 5NEO|1|A, 5NEP|1|A, 5NEQ|1|A, 5NEX|1|A, 5NOM|1|A(1) 5NEF|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_2.5_91124.2NR_2.5_91124.33.62(6) 5NEF|1|A, 5NEO|1|A, 5NEP|1|A, 5NEQ|1|A, 5NEX|1|A, 5NOM|1|A(0) (3) 6HBT|1|A, 6HBX|1|A, 6HC5|1|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
15NEX|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with agmatineX-RAY DIFFRACTION1.7217
25NOM|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidineX-RAY DIFFRACTION1.9317
35NEF|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with guanidineX-RAY DIFFRACTION1.9117
45NEP|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with methylguanidineX-RAY DIFFRACTION1.617
55NEQ|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loop with aminoguanidineX-RAY DIFFRACTION1.6917
65NEO|1|AThe structure of the G. violaceus guanidine II riboswitch P1 stem-loopX-RAY DIFFRACTION1.6917

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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