Equivalence class NR_2.5_93549.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 3B58|B (rep) | Minimally Junctioned Hairpin Ribozyme Incorporates A38G Mutation and a 2',5'-Phosphodiester Linkage at the Active Site | X-ray diffraction | 2.65 | 2008-08-12 | |||||
| 2 | 3B5A|B | Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating A38G mutation with a 2'OMe modification at the active site | X-ray diffraction | 2.35 | 2008-08-12 | |||||
| 3 | 3B5F|B | Crystal Structure of a Minimally Hinged Hairpin Ribozyme Incorporating the Ade38Dap Mutation and a 2',5' Phosphodiester Linkage at the Active Site | X-ray diffraction | 2.7 | 2008-08-12 | |||||
| 4 | 3B5S|B | Minimally Hinged Hairpin Ribozyme Incorporates A38DAP Mutation and 2'-O-methyl Modification at the Active Site | X-ray diffraction | 2.25 | 2008-08-12 | |||||
| 5 | 3B91|B | Minimally Hinged Hairpin Ribozyme Incorporates Ade38(2AP) and 2',5'-Phosphodiester Linkage Mutations at the Active Site | X-ray diffraction | 2.75 | 2008-08-12 | |||||
| 6 | 3BBI|B | Minimally Junctioned Hairpin Ribozyme Incorporating A38(2AP) and A-1 2'-O-Me Modifications near Active Site | X-ray diffraction | 2.35 | 2008-08-12 | |||||
| 7 | 3BBK|B | Miminally Junctioned Hairpin Ribozyme Incorporates A38C and 2'5'-phosphodiester Linkage within Active Site | X-ray diffraction | 2.75 | 2008-08-12 | |||||
| 8 | 3BBM|B | Minimally Junctioned Hairpin Ribozyme Incorporates A38C and 2'O-Me Modification at Active Site | X-ray diffraction | 2.65 | 2008-08-12 | |||||
| 9 | 3CQS|C | A 3'-OH, 2',5'-phosphodiester substitution in the hairpin ribozyme active site reveals similarities with protein ribonucleases | X-ray diffraction | 2.8 | 2008-05-20 | |||||
| 10 | 3CR1|C | crystal structure of a minimal, mutant, all-RNA hairpin ribozyme (A38C, A-1OMA) grown from MgCl2 | X-ray diffraction | 2.25 | 2008-08-26 | |||||
| 11 | 3I2Q|C | Crystal structure of the hairpin ribozyme with 2'OMe substrate strand and N1-deazaadenosine at position A9 | X-ray diffraction | 2.9 | 2009-11-03 | |||||
| 12 | 3I2R|C | Crystal structure of the hairpin ribozyme with a 2',5'-linked substrate with N1-deazaadenosine at position A9 | X-ray diffraction | 2.8 | 2009-11-03 | |||||
| 13 | 3I2S|C | Crystal structure of the hairpin ribozyme with a 2'OMe substrate and N1-deazaadenosine at position A10 | X-ray diffraction | 2.75 | 2009-11-03 | |||||
| 14 | 3I2U|C | Crystal structure of the haiprin ribozyme with a 2',5'-linked substrate and N1-deazaadenosine at position A10 | X-ray diffraction | 2.8 | 2009-11-03 |
Release history
| Release | 0.1 | 0.2 | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 0.9 | 0.10 | 0.11 | 0.12 | 0.13 | 0.14 | 0.15 | 0.16 | 0.17 | 0.18 | 0.19 | 0.20 | 0.21 | 0.22 | 0.23 | 0.24 | 0.25 | 0.26 | 0.27 | 0.28 | 0.29 | 0.30 | 0.31 | 0.32 | 0.33 | 0.34 | 0.35 | 0.36 | 0.37 | 0.38 | 0.39 | 0.40 | 0.41 | 0.42 | 0.43 | 0.44 | 0.45 | 0.46 | 0.47 | 0.48 | 0.49 | 0.50 | 0.51 | 0.52 | 0.53 | 0.54 | 0.55 | 0.56 | 0.57 | 0.58 | 0.59 | 0.60 | 0.61 | 0.62 | 0.63 | 0.64 | 0.65 | 0.66 | 0.67 | 0.68 | 0.69 | 0.70 | 0.71 | 0.72 | 0.73 | 0.74 | 0.75 | 0.76 | 0.77 | 0.78 | 0.79 | 0.80 | 0.81 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2011-02-05 | 2011-02-12 | 2011-02-16 | 2011-02-19 | 2011-02-26 | 2011-03-05 | 2011-03-12 | 2011-03-19 | 2011-03-26 | 2011-04-02 | 2011-04-09 | 2011-04-11 | 2011-04-16 | 2011-04-23 | 2011-04-30 | 2011-05-07 | 2011-05-14 | 2011-05-21 | 2011-05-28 | 2011-06-04 | 2011-06-11 | 2011-06-18 | 2011-06-25 | 2011-07-02 | 2011-07-09 | 2011-07-16 | 2011-07-23 | 2011-07-30 | 2011-08-06 | 2011-08-13 | 2011-08-20 | 2011-08-27 | 2011-09-03 | 2011-09-10 | 2011-09-17 | 2011-09-24 | 2011-10-01 | 2011-10-08 | 2011-10-15 | 2011-10-22 | 2011-10-29 | 2011-11-05 | 2011-11-12 | 2011-11-19 | 2011-11-26 | 2011-12-03 | 2011-12-10 | 2011-12-17 | 2011-12-24 | 2011-12-31 | 2012-01-07 | 2012-01-14 | 2012-01-21 | 2012-01-28 | 2012-02-04 | 2012-02-11 | 2012-02-18 | 2012-02-25 | 2012-03-03 | 2012-03-10 | 2012-03-17 | 2012-03-24 | 2012-03-31 | 2012-04-07 | 2012-04-14 | 2012-04-21 | 2012-04-28 | 2012-05-05 | 2012-05-12 | 2012-05-19 | 2012-05-26 | 2012-06-02 | 2012-06-09 | 2012-06-16 | 2012-06-23 | 2012-06-30 | 2012-07-07 | 2012-07-14 | 2012-07-21 | 2012-07-28 | 2012-08-04 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: