Equivalence class NR_20.0_04288.1 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | #NTs | Date |
|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 4G7O|1|I (rep) | 5'-R(*GP*A)-3' | Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA | X-ray diffraction | 2.99 | 2 | 2012-10-31 | ||||
| 2 | 4G7O|1|S | 5'-R(*GP*A)-3' | Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA | X-ray diffraction | 2.99 | 2 | 2012-10-31 | ||||
| 3 | 5X22|1|S | RNA (5'-R(*GP*A)-3') | Thermus thermophilus | Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP | X-ray diffraction | 3.35 | 2 | 2017-07-05 | |||
| 4 | 5X22|1|I | RNA (5'-R(*GP*A)-3') | Thermus thermophilus | Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP | X-ray diffraction | 3.35 | 2 | 2017-07-05 | |||
| 5 | 5X21|1|I | RNA (5'-R(*GP*A)-3') | Thermus thermophilus | Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM) | X-ray diffraction | 3.32 | 2 | 2017-07-05 | |||
| 6 | 5UH6|1|I | RNA (5'-R(*GP*A)-3') | Mycobacterium tuberculosis | Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with Rifampin | X-ray diffraction | 3.84 | 2 | 2017-04-12 | |||
| 7 | 5UH9|1|I | RNA (5'-R(*GP*A)-3') | Mycobacterium tuberculosis | Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA | X-ray diffraction | 4.4 | 2 | 2017-04-12 |
Release history
| Release | 2.136 | 2.137 | 2.138 | 2.139 | 2.140 | 2.141 | 2.142 | 2.143 | 2.144 | 2.145 | 2.146 | 2.147 | 2.148 | 2.149 | 2.150 | 2.151 | 2.152 | 2.153 | 2.154 | 2.155 | 2.156 | 2.157 | 2.158 | 3.0 | 3.1 | 3.2 | 3.3 | 3.4 | 3.5 | 3.6 | 3.7 | 3.8 | 3.9 | 3.10 | 3.11 | 3.12 | 3.13 | 3.14 | 3.15 | 3.16 | 3.17 | 3.18 | 3.19 | 3.20 | 3.21 | 3.22 | 3.23 | 3.24 | 3.25 | 3.26 | 3.27 | 3.28 | 3.29 | 3.30 | 3.31 | 3.32 | 3.33 | 3.34 | 3.35 | 3.36 | 3.37 | 3.38 | 3.39 | 3.40 | 3.41 | 3.42 | 3.43 | 3.44 | 3.45 | 3.46 | 3.47 | 3.48 | 3.49 | 3.50 | 3.51 | 3.52 | 3.53 | 3.54 | 3.55 | 3.56 | 3.57 | 3.58 | 3.59 | 3.60 | 3.61 | 3.62 | 3.63 | 3.64 | 3.65 | 3.66 | 3.67 | 3.68 | 3.69 | 3.70 | 3.71 | 3.72 | 3.73 | 3.74 | 3.75 | 3.76 | 3.77 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2017-07-10 | 2017-07-15 | 2017-07-26 | 2017-07-31 | 2017-08-05 | 2017-08-12 | 2017-08-19 | 2017-08-26 | 2017-09-03 | 2017-09-09 | 2017-09-16 | 2017-09-23 | 2017-09-30 | 2017-10-07 | 2017-10-14 | 2017-10-21 | 2017-10-28 | 2017-11-03 | 2017-11-10 | 2017-11-17 | 2017-11-24 | 2017-12-01 | 2017-12-08 | 2017-12-15 | 2017-12-22 | 2017-12-29 | 2018-01-05 | 2018-01-12 | 2018-01-19 | 2018-01-26 | 2018-02-02 | 2018-02-09 | 2018-02-16 | 2018-02-23 | 2018-03-01 | 2018-03-08 | 2018-03-15 | 2018-03-22 | 2018-03-29 | 2018-04-06 | 2018-04-13 | 2018-04-20 | 2018-04-27 | 2018-05-04 | 2018-05-11 | 2018-05-18 | 2018-05-25 | 2018-06-01 | 2018-06-08 | 2018-06-15 | 2018-06-22 | 2018-06-29 | 2018-07-06 | 2018-07-13 | 2018-07-20 | 2018-07-27 | 2018-08-03 | 2018-08-10 | 2018-08-17 | 2018-08-24 | 2018-08-31 | 2018-09-07 | 2018-09-14 | 2018-09-21 | 2018-09-28 | 2018-10-05 | 2018-10-12 | 2018-10-19 | 2018-10-26 | 2018-11-02 | 2018-11-09 | 2018-11-16 | 2018-11-23 | 2018-11-30 | 2018-12-07 | 2018-12-14 | 2018-12-21 | 2018-12-28 | 2019-01-04 | 2019-01-11 | 2019-01-18 | 2019-01-25 | 2019-02-01 | 2019-02-08 | 2019-02-15 | 2019-02-22 | 2019-03-01 | 2019-03-08 | 2019-03-15 | 2019-03-22 | 2019-03-29 | 2019-04-05 | 2019-04-12 | 2019-04-19 | 2019-04-26 | 2019-05-03 | 2019-05-10 | 2019-05-17 | 2019-05-24 | 2019-05-31 | 2019-06-07 |
Parents
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | #NTs |
|---|---|---|---|---|---|---|
| 1 | 5X22|1|I | Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP | X-RAY DIFFRACTION | 3.35 | 2 | |
| 2 | 5UH9|1|I | Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2nt RNA | X-RAY DIFFRACTION | 4.4 | 2 | |
| 3 | 5X21|1|I | Crystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM) | X-RAY DIFFRACTION | 3.32 | 2 | |
| 4 | 5X22|1|S | Crystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPP | X-RAY DIFFRACTION | 3.35 | 2 | |
| 5 | 4G7O|1|S | Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA | X-RAY DIFFRACTION | 2.99 | 2 | |
| 6 | 5UH6|1|I | Crystal structure of Mycobacterium tuberculosis transcription initiation complex containing 2ntRNA in complex with Rifampin | X-RAY DIFFRACTION | 3.84 | 2 | |
| 7 | 4G7O|1|I | Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNA | X-RAY DIFFRACTION | 2.99 | 2 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
Coloring options: