#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17QCA|1|S60 (rep)Small subunit ribosomal RNARNA SSUSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosomeElectron microscopy2.782022-11-30
28BR3|1|S60Small subunit ribosomal RNARNA 16SSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingElectron microscopy9.552023-04-12
38P5D|1|S60Small subunit ribosomal RNARNA 16SSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingElectron microscopy9.552023-06-21
47QJH|1|R60Small subunit ribosomal RNARNA 16SSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosome dimerElectron microscopy102022-12-28
57QJH|1|S60Small subunit ribosomal RNARNA 16SSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosome dimerElectron microscopy102022-12-28
68P60|1|R60Small subunit ribosomal RNARNA 16SSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosome dimerElectron microscopy11.32023-06-21
78P60|1|S60Small subunit ribosomal RNARNA 16SSpraguea lophii 42_110EukaryaRF02542Spraguea lophii ribosome dimerElectron microscopy11.32023-06-21

Release history

Release3.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.298
Date2023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-30

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_08518.1NR_20.0_70847.23.288(4) 7QCA|1|S60, 7QJH|1|R60, 7QJH|1|S60, 8BR3|1|S60(3) 8P5D|1|S60, 8P60|1|R60, 8P60|1|S60(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_08518.1NR_20.0_62666.13.299(4) 7QCA|1|S60, 8P5D|1|S60, 8P60|1|R60, 8P60|1|S60(3) 7QJH|1|R60, 7QJH|1|S60, 8BR3|1|S60(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17QJH|1|R60Spraguea lophii ribosome dimerELECTRON MICROSCOPY101354
28P60|1|R60Spraguea lophii ribosome dimerELECTRON MICROSCOPY11.31354
38P5D|1|S60Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingELECTRON MICROSCOPY9.551354
48BR3|1|S60Spraguea lophii ribosome in the closed conformation by cryo sub tomogram averagingELECTRON MICROSCOPY9.551354
57QJH|1|S60Spraguea lophii ribosome dimerELECTRON MICROSCOPY101354
68P60|1|S60Spraguea lophii ribosome dimerELECTRON MICROSCOPY11.31354
77QCA|1|S60Spraguea lophii ribosomeELECTRON MICROSCOPY2.781354

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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