#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18BF8|1|B (rep)Deinococcus radiodurans R1 chromosome 1Deinococcus radiodurans R1ISDra2 TnpB in complex with reRNAElectron microscopy2.82023-04-12
28EX9|1|BRNA (150-MER)Deinococcus radiodurans R1ISDra2 TnpB in complex with reRNA and cognate DNA, conformation 2 (RuvC domain unresolved)Electron microscopy2.962023-04-05
38H1J|1|BomegaRNA (130-MER)Deinococcus radiodurans R1Cryo-EM structure of the TnpB-omegaRNA-target DNA ternary complexElectron microscopy3.12023-04-12
48EXA|1|BRNA (150-MER)Deinococcus radiodurans R1ISDra2 TnpB in complex with reRNA and cognate DNA, conformation 1 (RuvC domain resolved)Electron microscopy3.142023-04-05

Release history

Release3.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.355
Date2023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-02

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_27790.1NR_20.0_11084.13.278(2) 8EX9|1|B, 8EXA|1|B(2) 8BF8|1|B, 8H1J|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18EXA|1|BISDra2 TnpB in complex with reRNA and cognate DNA, conformation 1 (RuvC domain resolved)ELECTRON MICROSCOPY3.14101
28EX9|1|BISDra2 TnpB in complex with reRNA and cognate DNA, conformation 2 (RuvC domain unresolved)ELECTRON MICROSCOPY2.96102
38BF8|1|BISDra2 TnpB in complex with reRNAELECTRON MICROSCOPY2.8111
48H1J|1|BCryo-EM structure of the TnpB-omegaRNA-target DNA ternary complexELECTRON MICROSCOPY3.1102

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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