#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17OSM|1|ASIT (rep)Transfer RNAMRNA, PHE tRNASaccharomyces cerevisiaeEukaryaRF00005Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
26ZVI|1|dTransfer RNAA/P-site tRNA, mRNASaccharomyces cerevisiaeEukaryaRF00005Mbf1-ribosome complexElectron microscopy32020-09-09
36SV4|1|nbTransfer RNAtRNA (A/P)Saccharomyces cerevisiaeEukaryaRF00005The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
46SV4|1|ncTransfer RNAtRNA (A/P)Saccharomyces cerevisiaeEukaryaRF00005The cryo-EM structure of SDD1-stalled collided trisome.Electron microscopy3.32020-03-04
56I7O|1|nbTransfer RNAA/P hybrid tRNASaccharomyces cerevisiaeEukaryaRF00005The structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.Electron microscopy5.32019-01-16

Release history

Release3.2083.2093.2103.2113.2123.2133.2143.2153.2163.2173.2183.2193.2203.2213.2223.2233.2243.2253.2263.2273.2283.2293.2303.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.270
Date2021-12-082021-12-152021-12-222021-12-292022-01-052022-01-122022-01-192022-01-262022-02-022022-02-092022-02-162022-02-232022-03-022022-03-092022-03-162022-03-232022-03-302022-04-062022-04-132022-04-202022-04-272022-05-042022-05-112022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-15

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_38961.3NR_20.0_38961.23.208(4) 6I7O|1|nb, 6SV4|1|nb, 6SV4|1|nc, 6ZVI|1|d(1) 7OSM|1|ASIT(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_38961.3NR_20.0_38961.43.271(5) 6I7O|1|nb, 6SV4|1|nb, 6SV4|1|nc, 6ZVI|1|d, 7OSM|1|ASIT(0) (1) 7ZUX|1|6

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16ZVI|1|dMbf1-ribosome complexELECTRON MICROSCOPY376
26I7O|1|nbThe structure of a di-ribosome (disome) as a unit for RQC and NGD quality control pathways recognition.ELECTRON MICROSCOPY5.376
36SV4|1|nbThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.376
46SV4|1|ncThe cryo-EM structure of SDD1-stalled collided trisome.ELECTRON MICROSCOPY3.376
57OSM|1|ASITIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION375

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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