#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14V8C|1|AB (rep)5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
24V8E|1|CB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
34V9R|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
44W2G|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
54V9S|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
61VY4|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
74P6F|1|YB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
84LT8|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
94V87|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
104V6F|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
111VY7|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
121VY6|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
134V8H|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of HPF bound to the 70S ribosome.X-ray diffraction3.12014-07-09
144W2H|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
154L71|1|RB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
164L47|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-ray diffraction3.222014-08-06
174V5P|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
184V5P|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
194V8E|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
204V8D|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
214V8C|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
224V8B|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
234V8D|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
244W2E|1|B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92014-10-01
254W2I|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
264W2F|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
274V95|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YAEJ bound to the 70S ribosomeX-ray diffraction3.22014-07-09
281VY5|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
294V9R|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
304LT8|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
314L47|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-ray diffraction3.222014-08-06
324LNT|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
334P6F|1|RB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the peptolide 12C bound to bacterial ribosomeX-ray diffraction3.62014-10-01
344LNT|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
354P70|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
364V9I|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
374V8J|1|BB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
384V5C|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
394V5C|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
404V9M|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction42014-07-09
414V8F|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
424V87|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
434W2H|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
444V8H|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of HPF bound to the 70S ribosome.X-ray diffraction3.12014-07-09
454V9S|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
464V6G|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
474P70|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-ray diffraction3.682014-08-13
484L71|1|YB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-ray diffraction3.92014-08-06
494LFZ|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
504LEL|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
514V9Q|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-ray diffraction3.42014-07-09
524V5E|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
534V9Q|1|CB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-ray diffraction3.42014-07-09
544V9I|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
554V97|1|DB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
564V5E|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
574V8J|1|DB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G347U.X-ray diffraction3.92014-07-09
584V9A|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tetracycline.X-ray diffraction3.32014-07-09
594V8F|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
604V8B|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
614V8I|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
621VY5|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
634W2G|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
644W2I|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
654LEL|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-ray diffraction3.92014-08-06
664LSK|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
674V67|1|BB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
684V6A|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
694V9K|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
704V83|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.52014-07-09
714V5M|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001tRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)Electron microscopy7.82014-07-09
724V9L|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
734V6A|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
744V5D|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
754V83|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.52014-07-09
764V67|1|DB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
774V8G|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
784V8I|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
794LSK|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
804LFZ|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-ray diffraction3.922014-08-06
811VVJ|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
824V5D|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
834V7X|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
844V8U|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
854V97|1|BB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal structure of the bacterial ribosome ram mutation G299A.X-ray diffraction3.522014-07-09
864V5R|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
874V5J|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
884V9N|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-ray diffraction3.42014-07-09
894V5F|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
904V63|1|DB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
914V8U|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-ray diffraction3.72014-07-09
924V5F|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The structure of the ribosome with elongation factor G trapped in the post-translocational stateX-ray diffraction3.62014-07-09
934V5R|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
944V5J|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
954V9N|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-ray diffraction3.42014-07-09
964V8A|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-ray diffraction3.22014-07-09
974V8A|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-ray diffraction3.22014-07-09
984V8G|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
994V95|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YAEJ bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1004W2F|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
1014V7L|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1024V5Q|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
1034V9H|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-ray diffraction2.862014-07-09
1044V7P|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1054V63|1|BB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
1064V7M|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
1074V9M|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction42014-07-09
1084V9L|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
1094V7Y|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
1104V5N|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001tRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)Electron microscopy7.62014-07-09
1114V7P|1|CB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Recognition of the amber stop codon by release factor RF1.X-ray diffraction3.622014-07-09
1124V7Y|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
1134V7X|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
1144V9K|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.52014-07-09
1154V84|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.42014-07-09
1164V9B|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tigecycline.X-ray diffraction3.12014-07-09
1174V9B|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tigecycline.X-ray diffraction3.12014-07-09
1184V9A|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of the 70S ribosome with tetracycline.X-ray diffraction3.32014-07-09
1191VY4|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1201VVJ|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
1214V7J|1|AB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (precleavage state)X-ray diffraction3.32014-07-09
1224V51|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1234V68|1|BB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001T. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.Electron microscopy6.42014-07-09
1244V90|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Thermus thermophilus RibosomeX-ray diffraction2.952014-07-09
1254V84|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-ray diffraction3.42014-07-09
1264V7W|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
1274V7J|1|BB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (precleavage state)X-ray diffraction3.32014-07-09
1284V51|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1294V5Q|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
1304V7W|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
1314V6F|1|AB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
1324V4J|1|x5S ribosomal RNA5S LARGE SUBUNIT RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Interactions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-ray diffraction3.832014-07-09
1334V7L|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1344W29|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-ray diffraction3.82014-10-01
1354V8N|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-ray diffraction3.12014-07-09
1364V8N|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-ray diffraction3.12014-07-09
1371VY6|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
1381VY7|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1394V7K|1|AB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-ray diffraction3.62014-07-09
1404V8Q|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
1414V7K|1|BB5S ribosomal RNARNA (119-MER)Thermus thermophilusBacteriaRF00001Structure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-ray diffraction3.62014-07-09
1424V5S|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1434V9J|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.862014-07-09
1444V5S|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1454V5K|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1464V8X|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of Thermus thermophilus ribosomeX-ray diffraction3.352014-07-09
1474V5K|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1484V5A|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
1494V8X|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of Thermus thermophilus ribosomeX-ray diffraction3.352014-07-09
1504V9J|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-ray diffraction3.862014-07-09
1514V6G|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
1524V4I|1|x5S ribosomal RNA5S LARGE SUBUNIT RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-ray diffraction3.712014-07-09
1534V5G|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.62014-07-09
1544V5A|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
1554V5G|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-ray diffraction3.62014-07-09
1564V8O|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-ray diffraction3.82014-07-09
1574V5L|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.12014-07-09
1584W29|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF0000170S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-ray diffraction3.82014-10-01
1594V4S|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the whole ribosomal complex.X-ray diffraction6.762014-07-09
1604V4T|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the whole ribosomal complex with a stop codon in the A-site.X-ray diffraction6.462014-07-09
1614V4R|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the whole ribosomal complex.X-ray diffraction5.92014-07-09
1624V4Z|1|BB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF0000170S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-ray diffraction4.512014-07-09
1634V7Z|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-ray diffraction3.12014-07-09
1644V7Z|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-ray diffraction3.12014-07-09
1654V4X|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-ray diffraction52014-07-09
1664V4Y|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-ray diffraction5.52014-07-09
1674V7M|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
1684V4P|1|AB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of 70S ribosome with thrS operator and tRNAs.X-ray diffraction5.52014-07-09
1694V42|1|BB5S ribosomal RNA50S 5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure of the ribosome at 5.5 A resolution.X-ray diffraction5.52014-07-09

Release history

Release2.02.12.22.32.42.52.6
Date2014-12-052014-12-122014-12-192014-12-262015-01-022015-01-092015-01-16

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14W29|1|BB70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.8119
24W29|1|DB70S ribosome translocation intermediate containing elongation factor EFG/GDP/fusidic acid, mRNA, and tRNAs trapped in the AP/AP pe/E chimeric hybrid state.X-RAY DIFFRACTION3.8119
34V9J|1|BB70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.86119
44V9J|1|DB70S ribosome translocation intermediate GDPNP-II containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.86119
54V9M|1|BB70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION4119
64V9L|1|BB70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
74V9L|1|DB70S Ribosome translocation intermediate FA-3.6A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
84V9M|1|DB70S Ribosome translocation intermediate FA-4.2A containing elongation factor EFG/FUSIDIC ACID/GDP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION4119
94V9K|1|BB70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
104V9K|1|DB70S ribosome translocation intermediate GDPNP-I containing elongation factor EFG/GDPNP, mRNA, and tRNA bound in the pe*/E state.X-RAY DIFFRACTION3.5119
114V7M|1|DBThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.45119
124V9H|1|BBCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.86119
134V90|1|BBThermus thermophilus RibosomeX-RAY DIFFRACTION2.95119
144V5P|1|DBThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
154V5P|1|BBThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
164V5Q|1|DBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
174V5Q|1|BBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.1119
184V5R|1|DBThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
194V5R|1|BBThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
204V5S|1|DBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
214V5S|1|BBThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.1119
224V8Q|1|ABComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.1119
234V5L|1|BBThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.1119
244V8O|1|BBCrystal structure of the hybrid state of ribosome in complex with the guanosine triphosphatase release factor 3X-RAY DIFFRACTION3.8119
254V5G|1|BBThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.6119
264V5G|1|DBThe crystal structure of the 70S ribosome bound to EF-Tu and tRNAX-RAY DIFFRACTION3.6119
274V6F|1|DBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.1122
284V6G|1|DBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.5120
294V8E|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.3122
304V8F|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.3122
314V8D|1|BBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
324V87|1|ABCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.1122
334V8B|1|BBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
344V8C|1|ABCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.3122
351VVJ|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.44120
364LFZ|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.92120
374P70|1|YBCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.68120
384P6F|1|YBCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.6120
394LNT|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
404LT8|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.14120
414L47|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.22120
424L71|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.9120
434LSK|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.48120
444LEL|1|YBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.9120
454V9A|1|BBCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.3122
464V9B|1|BBCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.1122
474P70|1|RBCrystal Structure of Unmodified tRNA Proline (CGG) Bound to Codon CCG on the RibosomeX-RAY DIFFRACTION3.68120
481VVJ|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.44120
494LFZ|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U in the Absence of ParomomycinX-RAY DIFFRACTION3.92120
504LEL|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.9120
514L71|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-A on the RibosomeX-RAY DIFFRACTION3.9120
524L47|1|RBCrystal Structure of Frameshift Suppressor tRNA SufA6 Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION3.22120
534LT8|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.14120
544LSK|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.48120
554LNT|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
564P6F|1|RBCrystal structure of the peptolide 12C bound to bacterial ribosomeX-RAY DIFFRACTION3.6120
574V6G|1|BBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.5120
581VY7|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
591VY6|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
601VY4|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
614W2H|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
624V9S|1|DBCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.1120
634V9R|1|DBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
641VY5|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
654W2F|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
664W2G|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
674W2I|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
684V9R|1|BBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
694V9S|1|BBCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.1120
701VY6|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
714W2G|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
724W2F|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
731VY5|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
741VY4|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
754W2H|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
761VY7|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
774W2I|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
784V8H|1|DBCrystal structure of HPF bound to the 70S ribosome.X-RAY DIFFRACTION3.1120
794V8H|1|BBCrystal structure of HPF bound to the 70S ribosome.X-RAY DIFFRACTION3.1120
804V8A|1|BBThe structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-RAY DIFFRACTION3.2120
814V8A|1|ABThe structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.X-RAY DIFFRACTION3.2120
824V8I|1|BBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
834V8I|1|DBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
844V8G|1|BBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
854V8G|1|DBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
864V95|1|BBCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.2120
874V95|1|DBCrystal structure of YAEJ bound to the 70S ribosomeX-RAY DIFFRACTION3.2120
884W2E|1|BCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9120
894V5E|1|DBInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.45119
904V5E|1|BBInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.45119
914V97|1|BBCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.52119
924V97|1|DBCrystal structure of the bacterial ribosome ram mutation G299A.X-RAY DIFFRACTION3.52119
934V8J|1|DBCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.9119
944V7M|1|BBThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.45119
954V6A|1|BBStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.1119
964V6A|1|DBStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.1119
974V7L|1|BBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
984V5C|1|BBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.3119
994V5C|1|DBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.3119
1004V8J|1|BBCrystal structure of the bacterial ribosome ram mutation G347U.X-RAY DIFFRACTION3.9119
1014V7L|1|DBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
1024V6F|1|ABElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.1122
1034V8D|1|DBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
1044V8F|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.3122
1054V8E|1|CBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.3122
1064V8B|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
1074V8C|1|BBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.3122
1084V87|1|DBCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.1122
1094V9A|1|DBCrystal Structure of the 70S ribosome with tetracycline.X-RAY DIFFRACTION3.3122
1104V9B|1|DBCrystal Structure of the 70S ribosome with tigecycline.X-RAY DIFFRACTION3.1122
1114V7Z|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-RAY DIFFRACTION3.1119
1124V7Z|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with telithromycin.X-RAY DIFFRACTION3.1119
1134V7W|1|DBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
1144V7W|1|BBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
1154V7X|1|DBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
1164V7X|1|BBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
1174V7Y|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
1184V7Y|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
1194V51|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1204V68|1|BBT. thermophilus 70S ribosome in complex with mRNA, tRNAs and EF-Tu.GDP.kirromycin ternary complex, fitted to a 6.4 A Cryo-EM map.ELECTRON MICROSCOPY6.4119
1214V51|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1224V5A|1|BBStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.5119
1234V5A|1|DBStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.5119
1244V5K|1|BBStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.2119
1254V5K|1|DBStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.2119
1264V8X|1|BBStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.35119
1274V8X|1|DBStructure of Thermus thermophilus ribosomeX-RAY DIFFRACTION3.35119
1284V7K|1|BBStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.6119
1294V7K|1|ABStructure of RelE nuclease bound to the 70S ribosome (postcleavage state)X-RAY DIFFRACTION3.6119
1304V7J|1|BBStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.3119
1314V7J|1|ABStructure of RelE nuclease bound to the 70S ribosome (precleavage state)X-RAY DIFFRACTION3.3119
1324V8N|1|DBThe crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-RAY DIFFRACTION3.1119
1334V8N|1|BBThe crystal structure of agmatidine tRNA-Ile2 bound to the 70S ribosome in the A and P site.X-RAY DIFFRACTION3.1119
1344V5D|1|DBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.5119
1354V5D|1|BBStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.5119
1364V5J|1|BBStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.1119
1374V5J|1|DBStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.1119
1384V9I|1|BBCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.3119
1394V9I|1|DBCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.3119
1404V8U|1|DBCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.7119
1414V8U|1|BBCrystal Structure of 70S Ribosome with Both Cognate tRNAs in the E and P Sites Representing an Authentic Elongation Complex.X-RAY DIFFRACTION3.7119
1424V5F|1|DBThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.6119
1434V5F|1|BBThe structure of the ribosome with elongation factor G trapped in the post-translocational stateX-RAY DIFFRACTION3.6119
1444V5M|1|BBtRNA tranlocation on the 70S ribosome: the pre-translocational translocation intermediate TI(PRE)ELECTRON MICROSCOPY7.8119
1454V5N|1|BBtRNA translocation on the 70S ribosome: the post- translocational translocation intermediate TI(POST)ELECTRON MICROSCOPY7.6119
1464V9N|1|BBCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.4119
1474V9N|1|DBCrystal structure of the 70S ribosome bound with the Q253P mutant of release factor RF2.X-RAY DIFFRACTION3.4119
1484V9Q|1|CBCrystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-RAY DIFFRACTION3.4119
1494V9Q|1|ABCrystal Structure of Blasticidin S Bound to Thermus Thermophilus 70S Ribosome.X-RAY DIFFRACTION3.4119
1504V67|1|BBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
1514V67|1|DBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
1524V63|1|BBStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.21119
1534V63|1|DBStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.21119
1544V7P|1|CBRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.62119
1554V7P|1|BBRecognition of the amber stop codon by release factor RF1.X-RAY DIFFRACTION3.62119
1564V83|1|DBCrystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.5119
1574V83|1|BBCrystal structure of a complex containing domain 3 from the PSIV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.5119
1584V84|1|BBCrystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.4119
1594V84|1|DBCrystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.X-RAY DIFFRACTION3.4119
1604V4T|1|BBCrystal structure of the whole ribosomal complex with a stop codon in the A-site.X-RAY DIFFRACTION6.46123
1614V4R|1|BBCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION5.9123
1624V4S|1|BBCrystal structure of the whole ribosomal complex.X-RAY DIFFRACTION6.76123
1634V4P|1|ABCrystal structure of 70S ribosome with thrS operator and tRNAs.X-RAY DIFFRACTION5.5123
1644V4Z|1|BB70S Thermus thermophilous ribosome functional complex with mRNA and E- and P-site tRNAs at 4.5A.X-RAY DIFFRACTION4.51123
1654V4Y|1|BBCrystal structure of the 70S Thermus thermophilus ribosome with translocated and rotated Shine-Dalgarno Duplex.X-RAY DIFFRACTION5.5123
1664V4X|1|BBCrystal structure of the 70S Thermus thermophilus ribosome showing how the 16S 3'-end mimicks mRNA E and P codons.X-RAY DIFFRACTION5123
1674V4J|1|xInteractions and Dynamics of the Shine-Dalgarno Helix in the 70S Ribosome.X-RAY DIFFRACTION3.83120
1684V4I|1|xCrystal Structure of a 70S Ribosome-tRNA Complex Reveals Functional Interactions and Rearrangements.X-RAY DIFFRACTION3.71120
1694V42|1|BBCrystal structure of the ribosome at 5.5 A resolution.X-RAY DIFFRACTION5.5123

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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