#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16CAP|1|W+ 6CAP|1|Y (rep)RNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-ray diffraction3.42018-07-25
26CAQ|1|W+ 6CAQ|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusCrystal Structure of 30S ribosomal subunit from Thermus thermophilusX-ray diffraction3.42018-07-25
34DR4|1|W+ 4DR4|1|V5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3', 5'-R(*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules boundX-ray diffraction3.972012-11-14
41IBL|1|Y+ 1IBL|1|ZA-SITE MESSENGER RNA FRAGMENT, ANTICODON STEM-LOOP OF PHENYLALANINE TRANSFER RNASTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCINX-ray diffraction3.112001-05-04
56CAO|1|W+ 6CAO|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusStructure of the ribosomal decoding complex at ambient temperatureX-ray diffraction3.452018-07-25
61IBM|1|Y+ 1IBM|1|ZA-SITE MESSENGER RNA FRAGMENT, ANTICODON STEM-LOOP OF PHENYLALANINE TRANSFER RNASTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITEX-ray diffraction3.312001-05-04
76CAS|1|W+ 6CAS|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MSX-ray diffraction3.52018-07-25
84DR5|1|W+ 4DR5|1|V5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3', 5'-R(*UP*UP*U)-3'Thermus thermophilusCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered cognate transfer RNA anticodon stem-loop and streptomycin boundX-ray diffraction3.452012-11-14
96CAR|1|W+ 6CAR|1|YRNA (5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3'), RNA (5'-R(*UP*UP*UP*UP*UP*U)-3')Thermus thermophilusSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-ray diffraction3.42018-07-25
104AQY|1|Z+ 4AQY|1|W5'-R(*GP*GP*GP*AP*UP*UP*GP*AP*AP*AP*AP*UP*CP*CP*C)-3', 5'-R(*UP*UP*CP*AP*AP*AP)-3'Thermus thermophilusStructure of ribosome-apramycin complexesX-ray diffraction3.52012-07-18

Release history

Release3.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.1393.1403.1413.1423.1433.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.1993.2003.2013.2023.2033.2043.2053.2063.2073.2083.2093.2103.2113.212
Date2019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-122020-08-192020-08-262020-09-022020-09-092020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-062021-10-132021-10-202021-10-272021-11-032021-11-102021-11-172021-11-242021-12-012021-12-082021-12-152021-12-222021-12-292022-01-05

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14DR4|1|W+ 4DR4|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, cognate transfer RNA anticodon stem-loop and multiple copies of paromomycin molecules boundX-RAY DIFFRACTION3.9715
26CAS|1|W+ 6CAS|1|YSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with N1MSX-RAY DIFFRACTION3.515
36CAQ|1|W+ 6CAQ|1|YCrystal Structure of 30S ribosomal subunit from Thermus thermophilusX-RAY DIFFRACTION3.415
46CAP|1|W+ 6CAP|1|YCrystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-RAY DIFFRACTION3.415
56CAR|1|W+ 6CAR|1|YSerial Femtosecond X-ray Crystal Structure of 30S ribosomal subunit from Thermus thermophilus in complex with SisomicinX-RAY DIFFRACTION3.415
66CAO|1|W+ 6CAO|1|YStructure of the ribosomal decoding complex at ambient temperatureX-RAY DIFFRACTION3.4515
71IBM|1|Y+ 1IBM|1|ZSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITEX-RAY DIFFRACTION3.3111
84DR5|1|W+ 4DR5|1|VCrystal structure of the Thermus thermophilus (HB8) 30S ribosomal subunit with codon, crystallographically disordered cognate transfer RNA anticodon stem-loop and streptomycin boundX-RAY DIFFRACTION3.4515
91IBL|1|Y+ 1IBL|1|ZSTRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH A MESSENGER RNA FRAGMENT AND COGNATE TRANSFER RNA ANTICODON STEM-LOOP BOUND AT THE A SITE AND WITH THE ANTIBIOTIC PAROMOMYCINX-RAY DIFFRACTION3.1115
104AQY|1|Z+ 4AQY|1|WStructure of ribosome-apramycin complexesX-RAY DIFFRACTION3.515

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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