#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11PJG|1|A (rep)5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'RNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTGX-ray diffraction1.152003-12-09
21PJO|1|A5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'Crystal Structure of an RNA/DNA hybrid of HIV-1 PPTX-ray diffraction1.12003-12-09
31G4Q|1|A5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'RNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTGX-ray diffraction1.152003-07-08
41JB8|1|A5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3'The Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular IntercalationX-ray diffraction2.382003-07-01
57NRP|1|ARNA (5'-R(*CP*AP*AP*AP*GP*AP*AP*AP*AP*G)-3')synthetic constructThe crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTGX-ray diffraction2.672022-06-22

Release history

Release3.2363.2373.2383.2393.2403.241
Date2022-06-222022-06-292022-07-062022-07-132022-07-202022-07-27

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_51549.2NR_20.0_51549.13.236(4) 1G4Q|1|A, 1JB8|1|A, 1PJG|1|A, 1PJO|1|A(1) 7NRP|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_51549.2NR_20.0_25735.13.242(5) 1G4Q|1|A, 1JB8|1|A, 1PJG|1|A, 1PJO|1|A, 7NRP|1|A(0) (4) 7OOO|1|A, 7OOO|1|D, 7OOS|1|A, 7OZZ|1|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
11PJO|1|ACrystal Structure of an RNA/DNA hybrid of HIV-1 PPTX-RAY DIFFRACTION1.114
21G4Q|1|ARNA/DNA HYBRID DECAMER OF CAAAGAAAAG/CTTTTCTTTGX-RAY DIFFRACTION1.1510
31PJG|1|ARNA/DNA Hybrid Decamer of CAAAGAAAAG/CTTTTCTTTGX-RAY DIFFRACTION1.1514
47NRP|1|AThe crystal structure of a DNA:RNA hybrid duplex sequence CTTTTCTTTGX-RAY DIFFRACTION2.6710
51JB8|1|AThe Crystal Structure of an RNA/DNA Hybrid Reveals Novel Intermolecular IntercalationX-RAY DIFFRACTION2.3810

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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