Equivalence class NR_20.0_56726.23 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 4V4Q|1|CA (rep) | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
2 | 4V4H|1|CA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
3 | 4V52|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
4 | 4V52|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-ray diffraction | 3.21 | 2014-07-09 |
5 | 4V54|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
6 | 5MY1|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli expressome | Electron microscopy | 7.6 | 2017-04-26 |
7 | 4A2I|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor | Electron microscopy | 16.5 | 2011-11-02 |
8 | 4V4Q|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
9 | 5LZD|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) | Electron microscopy | 3.4 | 2016-11-23 |
10 | 4V64|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
11 | 4V6C|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
12 | 4V54|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-ray diffraction | 3.3 | 2014-07-09 |
13 | 5J8A|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
14 | 4V64|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-ray diffraction | 3.5 | 2014-07-09 |
15 | 5H5U|1|h | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Mechanistic insights into the alternative translation termination by ArfA and RF2 | Electron microscopy | 3.01 | 2017-01-25 |
16 | 5IT8|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
17 | 4V53|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
18 | 5J91|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
19 | 5J5B|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
20 | 5IT8|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 3.12 | 2016-07-27 |
21 | 5J91|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-ray diffraction | 2.96 | 2016-07-06 |
22 | 5J5B|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the WT E coli ribosome bound to tetracycline | X-ray diffraction | 2.8 | 2016-07-27 |
23 | 4V4H|1|AA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-ray diffraction | 3.46 | 2014-07-09 |
24 | 4V5Y|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-ray diffraction | 4.45 | 2014-07-09 |
25 | 5J7L|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
26 | 4V53|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-ray diffraction | 3.54 | 2014-07-09 |
27 | 4V7V|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
28 | 5J8A|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-ray diffraction | 3.1 | 2016-07-06 |
29 | 5JC9|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
30 | 4V7S|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
31 | 4V55|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
32 | 5JC9|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-ray diffraction | 3.03 | 2016-07-06 |
33 | 4ADV|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunit | Electron microscopy | 13.5 | 2012-02-15 |
34 | 4V5Y|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-ray diffraction | 4.45 | 2014-07-09 |
35 | 4V57|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
36 | 4V55|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-ray diffraction | 4 | 2014-07-09 |
37 | 4WWW|1|QA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
38 | 5J7L|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-ray diffraction | 3 | 2016-07-27 |
39 | 5MDV|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | Electron microscopy | 2.97 | 2016-12-14 |
40 | 4V57|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-ray diffraction | 3.5 | 2014-07-09 |
41 | 4V7T|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
42 | 4V6D|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
43 | 5LZA|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, SECIS mRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC) | Electron microscopy | 3.6 | 2016-11-23 |
44 | 5J88|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
45 | 4V56|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
46 | 4V9P|1|FA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
47 | 5MDZ|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome (empty A site) | Electron microscopy | 3.1 | 2016-12-14 |
48 | 5MDW|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.06 | 2016-12-14 |
49 | 4YBB|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
50 | 4V9O|1|FA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
51 | 5IQR|1|2 | Small subunit ribosomal RNA | SSU rRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to the 70S ribosome | Electron microscopy | 3 | 2016-05-04 |
52 | 4U1U|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
53 | 5LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|x | Small subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA | 16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMet | Escherichia coli | Bacteria | RF00177 + RF01852 + RF00005 | Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) | Electron microscopy | 3.5 | 2016-11-23 |
54 | 4V50|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
55 | 5ME0|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112 | Electron microscopy | 13.5 | 2017-01-11 |
56 | 5ME1|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112 | Electron microscopy | 13.5 | 2017-01-11 |
57 | 4V9O|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
58 | 5J88|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-ray diffraction | 3.32 | 2016-07-06 |
59 | 5KPW|1|26 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | Electron microscopy | 3.9 | 2016-09-28 |
60 | 5AFI|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | Electron microscopy | 2.9 | 2015-03-11 |
61 | 4V6E|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
62 | 4U20|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
63 | 4V50|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-ray diffraction | 3.22 | 2014-07-09 |
64 | 5MDY|1|2 | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state) | Electron microscopy | 3.35 | 2016-12-21 |
65 | 4V9P|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
66 | 5KPS|1|27 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | Electron microscopy | 3.9 | 2016-09-28 |
67 | 4V56|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-ray diffraction | 3.93 | 2014-07-09 |
68 | 5LZF|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA, SECIS mRNA | Escherichia coli | Bacteria | RF00177 | Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H) | Electron microscopy | 4.6 | 2016-11-23 |
69 | 4U1U|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to quinupristin. | X-ray diffraction | 2.95 | 2014-07-30 |
70 | 5MGP|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | Electron microscopy | 3.1 | 2016-12-14 |
71 | 4V6C|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.19 | 2014-07-09 |
72 | 4U26|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
73 | 4U24|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
74 | 4YBB|1|BA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | High-resolution structure of the Escherichia coli ribosome | X-ray diffraction | 2.1 | 2015-03-18 |
75 | 5KPV|1|26 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II) | Electron microscopy | 4.1 | 2016-09-28 |
76 | 5KPX|1|26 | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | Electron microscopy | 3.9 | 2016-09-28 |
77 | 4U20|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
78 | 3J9Y|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | Electron microscopy | 3.9 | 2015-04-15 |
79 | 4V6E|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.71 | 2014-07-09 |
80 | 4V7U|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
81 | 4U27|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
82 | 4V7B|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | Electron microscopy | 6.8 | 2014-07-09 |
83 | 4V6D|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-ray diffraction | 3.81 | 2014-07-09 |
84 | 4WF1|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
85 | 4V9P|1|HA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
86 | 4U25|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
87 | 4V7T|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-ray diffraction | 3.19 | 2014-07-09 |
88 | 4V9O|1|DA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
89 | 4U1V|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
90 | 4WOI|1|DA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | Bacteria | RF00177 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
91 | 5U9G|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, truncated mRNA | Escherichia coli | Bacteria | RF00177 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | Electron microscopy | 3.2 | 2017-03-22 |
92 | 4V6V|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Tetracycline resistance protein Tet(O) bound to the ribosome | Electron microscopy | 9.8 | 2014-07-09 |
93 | 4V9P|1|DA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
94 | 4V7S|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to telithromycin. | X-ray diffraction | 3.25 | 2014-07-09 |
95 | 4WWW|1|XA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to CEM-101 | X-ray diffraction | 3.1 | 2014-12-24 |
96 | 4V9D|1|BA | Small subunit ribosomal RNA | 16S rRNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
97 | 4WF1|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to negamycin. | X-ray diffraction | 3.09 | 2014-11-05 |
98 | 4U27|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-ray diffraction | 2.8 | 2014-07-30 |
99 | 4U1V|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to linopristin. | X-ray diffraction | 3 | 2014-07-30 |
100 | 5KCR|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution | Electron microscopy | 3.6 | 2016-08-17 |
101 | 5JTE|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA | Electron microscopy | 3.6 | 2016-07-20 |
102 | 4V9D|1|AA | Small subunit ribosomal RNA | 16S rRNA, messenger RNA | Escherichia coli | Bacteria | RF00177 | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-ray diffraction | 3 | 2014-07-09 |
103 | 5JU8|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA | Electron microscopy | 3.6 | 2016-07-20 |
104 | 4V69|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Ternary complex-bound E.coli 70S ribosome. | Electron microscopy | 6.7 | 2014-07-09 |
105 | 4V5H|1|AA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | Electron microscopy | 5.8 | 2014-07-09 |
106 | 4V6M|1|AA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Structure of the ribosome-SecYE complex in the membrane environment | Electron microscopy | 7.1 | 2014-07-09 |
107 | 4V7V|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to clindamycin. | X-ray diffraction | 3.29 | 2014-07-09 |
108 | 5U9F|1|A | Small subunit ribosomal RNA | 16S ribosomal RNA, truncated mRNA | Escherichia coli | Bacteria | RF00177 | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | Electron microscopy | 3.2 | 2017-03-22 |
109 | 5LZC|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR) | Electron microscopy | 4.8 | 2016-11-23 |
110 | 5LZB|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) | Electron microscopy | 5.3 | 2016-11-23 |
111 | 4U25|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-ray diffraction | 2.9 | 2014-07-30 |
112 | 4WOI|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA | Escherichia coli | Bacteria | RF00177 | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-ray diffraction | 3 | 2015-08-05 |
113 | 4V89|1|AA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-ray diffraction | 3.7 | 2014-07-09 |
114 | 4V7A|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | Electron microscopy | 9 | 2014-07-09 |
115 | 3JCN|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I | Electron microscopy | 4.6 | 2016-03-09 |
116 | 4V85|1|AA | 16S rRNA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-ray diffraction | 3.2 | 2014-07-09 | ||||
117 | 4U26|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-ray diffraction | 2.8 | 2014-07-30 |
118 | 4V76|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | Electron microscopy | 17 | 2014-07-09 |
119 | 4U24|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-ray diffraction | 2.9 | 2014-07-30 |
120 | 4V6T|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | Electron microscopy | 8.3 | 2014-07-09 |
121 | 3J9Z|1|SA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
122 | 4V77|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | Electron microscopy | 17 | 2014-07-09 |
123 | 4V7U|1|CA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Crystal structure of the E. coli ribosome bound to erythromycin. | X-ray diffraction | 3.1 | 2014-07-09 |
124 | 4V6Y|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | Electron microscopy | 12 | 2014-07-09 |
125 | 3JCE|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | Electron microscopy | 3.2 | 2016-01-13 |
126 | 3JCJ|1|g | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | Electron microscopy | 3.7 | 2016-03-09 |
127 | 4V78|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | Electron microscopy | 20 | 2014-07-09 |
128 | 4V72|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | Electron microscopy | 13 | 2014-07-09 |
129 | 4V71|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | Electron microscopy | 20 | 2014-07-09 |
130 | 4V7I|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Ribosome-SecY complex. | Electron microscopy | 9.6 | 2014-07-09 |
131 | 4V6K|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural insights into cognate vs. near-cognate discrimination during decoding. | Electron microscopy | 8.25 | 2014-07-09 |
132 | 4V73|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | Electron microscopy | 15 | 2014-07-09 |
133 | 4V74|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | Electron microscopy | 17 | 2014-07-09 |
134 | 4V79|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | Electron microscopy | 15 | 2014-07-09 |
135 | 4V70|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | Electron microscopy | 17 | 2014-07-09 |
136 | 4V75|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | Electron microscopy | 12 | 2014-07-09 |
137 | 4V6Z|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | Electron microscopy | 12 | 2014-07-09 |
138 | 5KCS|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | Electron microscopy | 3.9 | 2016-08-17 |
139 | 5U4J|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.7 | 2017-01-11 |
140 | 4V6L|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural insights into cognate vs. near-cognate discrimination during decoding. | Electron microscopy | 13.2 | 2014-07-09 |
141 | 5U4I|1|a | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | Electron microscopy | 3.5 | 2017-01-11 |
142 | 5L3P|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | Electron microscopy | 3.7 | 2016-07-20 |
143 | 3JA1|1|SA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | Electron microscopy | 3.6 | 2015-07-01 |
144 | 4V9O|1|HA | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Control of ribosomal subunit rotation by elongation factor G | X-ray diffraction | 2.9 | 2014-07-09 |
145 | 4V9C|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
146 | 4V6R|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | Electron microscopy | 11.5 | 2014-07-09 |
147 | 4V6N|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) | Electron microscopy | 12.1 | 2014-07-09 |
148 | 4V6Q|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | Electron microscopy | 11.5 | 2014-07-09 |
149 | 4V6O|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | Electron microscopy | 14.7 | 2014-07-09 |
150 | 4V6P|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | Electron microscopy | 13.5 | 2014-07-09 |
151 | 4V9C|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA, Messenger RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Allosteric control of the ribosome by small-molecule antibiotics | X-ray diffraction | 3.3 | 2014-07-09 |
152 | 3J2H|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 18.8 | 2013-01-16 |
153 | 3J2G|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 16.5 | 2013-01-16 |
154 | 4V6S|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | Electron microscopy | 13.1 | 2014-07-09 |
155 | 4V7D|1|BA | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Escherichia coli | Bacteria | RF00177 | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) | Electron microscopy | 7.6 | 2014-07-09 |
156 | 3J2B|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 13.6 | 2013-01-16 |
157 | 3J2D|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 18.7 | 2013-01-16 |
158 | 4V7C|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure) | Electron microscopy | 7.6 | 2014-07-09 |
159 | 3J2E|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 15.3 | 2013-01-16 |
160 | 3J28|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 12.9 | 2013-01-16 |
161 | 3J2F|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 17.6 | 2013-01-16 |
162 | 3J29|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 14 | 2013-01-16 |
163 | 3J2C|1|N | Small subunit ribosomal RNA | 16S rRNA body domain | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 13.2 | 2013-01-16 |
164 | 3J2A|1|N | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | Electron microscopy | 13.1 | 2013-01-16 |
165 | 3JBV|1|A | Small subunit ribosomal RNA | RNA (1530-MER) | Escherichia coli | Bacteria | RF00177 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.32 | 2016-01-27 |
166 | 3JCD|1|a | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | Electron microscopy | 3.7 | 2016-01-13 |
167 | 4V4V|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 | Electron microscopy | 15 | 2014-07-09 |
168 | 5UZ4|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly | Electron microscopy | 5.8 | 2017-04-19 |
169 | 2YKR|1|A | Small subunit ribosomal RNA | 16S RRNA | Escherichia coli | Bacteria | RF00177 | 30S ribosomal subunit with RsgA bound in the presence of GMPPNP | Electron microscopy | 9.8 | 2011-08-24 |
170 | 4V4W|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Escherichia coli | Bacteria | RF00177 | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 | Electron microscopy | 15 | 2014-07-09 |
171 | 3JBU|1|A | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | Electron microscopy | 3.64 | 2016-01-27 |
172 | 4V5B|1|BA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
173 | 4V5B|1|DA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Structure of PDF binding helix in complex with the ribosome | X-ray diffraction | 3.74 | 2014-07-09 |
174 | 4V66|1|A1 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | Electron microscopy | 9 | 2014-07-09 |
175 | 4V65|1|A1 | Small subunit ribosomal RNA | 16S rRNA | Escherichia coli | Bacteria | RF00177 | Structure of the E. coli ribosome in the Pre-accommodation state | Electron microscopy | 9 | 2014-07-09 |
176 | 4V47|1|BA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome | Electron microscopy | 12.3 | 2014-07-09 |
177 | 4V48|1|BA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Escherichia coli | Bacteria | RF00177 | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome | Electron microscopy | 11.5 | 2014-07-09 |
Release history
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
#S | View | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|---|
1 | 4V65|1|A1 | Structure of the E. coli ribosome in the Pre-accommodation state | ELECTRON MICROSCOPY | 9 | 1530 | |
2 | 4V66|1|A1 | Structure of the E. coli ribosome and the tRNAs in Post-accommodation state | ELECTRON MICROSCOPY | 9 | 1530 | |
3 | 4V4W|1|AA | Structure of a SecM-stalled E. coli ribosome complex obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1143 | ELECTRON MICROSCOPY | 15 | 1488 | |
4 | 4V4V|1|AA | Structure of a pre-translocational E. coli ribosome obtained by fitting atomic models for RNA and protein components into cryo-EM map EMD-1056 | ELECTRON MICROSCOPY | 15 | 1488 | |
5 | 4V78|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3a) | ELECTRON MICROSCOPY | 20 | 1530 | |
6 | 4V79|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post3b) | ELECTRON MICROSCOPY | 15 | 1530 | |
7 | 4V74|1|AA | 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5b) | ELECTRON MICROSCOPY | 17 | 1530 | |
8 | 4V73|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre5a) | ELECTRON MICROSCOPY | 15 | 1530 | |
9 | 4V77|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2b) | ELECTRON MICROSCOPY | 17 | 1530 | |
10 | 4V6Z|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1b) | ELECTRON MICROSCOPY | 12 | 1530 | |
11 | 4V71|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre2) | ELECTRON MICROSCOPY | 20 | 1530 | |
12 | 4V6Y|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic pre-translocation state (pre1a) | ELECTRON MICROSCOPY | 12 | 1530 | |
13 | 4V72|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in hybrid pre-translocation state (pre4) | ELECTRON MICROSCOPY | 13 | 1530 | |
14 | 4V70|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate pre-translocation state (pre3) | ELECTRON MICROSCOPY | 17 | 1530 | |
15 | 4V76|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in intermediate post-translocation state (post2a) | ELECTRON MICROSCOPY | 17 | 1530 | |
16 | 4V75|1|AA | E. coli 70S-fMetVal-tRNAVal-tRNAfMet complex in classic post-translocation state (post1) | ELECTRON MICROSCOPY | 12 | 1530 | |
17 | 4V7A|1|AA | E. coli 70S-fMetVal-tRNAVal post-translocation complex (post4) | ELECTRON MICROSCOPY | 9 | 1530 | |
18 | 4V6N|1|BA | Structural characterization of mRNA-tRNA translocation intermediates (50S ribosome of class2 of the six classes) | ELECTRON MICROSCOPY | 12.1 | 1531 | |
19 | 4V6O|1|AA | Structural characterization of mRNA-tRNA translocation intermediates (class 4a of the six classes) | ELECTRON MICROSCOPY | 14.7 | 1531 | |
20 | 4V6P|1|AA | Structural characterization of mRNA-tRNA translocation intermediates (class 4b of the six classes) | ELECTRON MICROSCOPY | 13.5 | 1531 | |
21 | 4V6R|1|AA | Structural characterization of mRNA-tRNA translocation intermediates (class 6 of the six classes) | ELECTRON MICROSCOPY | 11.5 | 1531 | |
22 | 4V6Q|1|AA | Structural characterization of mRNA-tRNA translocation intermediates (class 5 of the six classes) | ELECTRON MICROSCOPY | 11.5 | 1531 | |
23 | 4V6S|1|BA | Structural characterization of mRNA-tRNA translocation intermediates (class 3 of the six classes) | ELECTRON MICROSCOPY | 13.1 | 1531 | |
24 | 3JA1|1|SA | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | ELECTRON MICROSCOPY | 3.6 | 1542 | |
25 | 3JBV|1|A | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.32 | 1530 | |
26 | 3JBU|1|A | Mechanisms of Ribosome Stalling by SecM at Multiple Elongation Steps | ELECTRON MICROSCOPY | 3.64 | 1530 | |
27 | 4V7I|1|BA | Ribosome-SecY complex. | ELECTRON MICROSCOPY | 9.6 | 1530 | |
28 | 4V6L|1|AA | Structural insights into cognate vs. near-cognate discrimination during decoding. | ELECTRON MICROSCOPY | 13.2 | 1531 | |
29 | 4V6K|1|BA | Structural insights into cognate vs. near-cognate discrimination during decoding. | ELECTRON MICROSCOPY | 8.25 | 1531 | |
30 | 4V69|1|AA | Ternary complex-bound E.coli 70S ribosome. | ELECTRON MICROSCOPY | 6.7 | 1530 | |
31 | 3JCE|1|a | Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4) | ELECTRON MICROSCOPY | 3.2 | 1533 | |
32 | 4V6E|1|AA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.71 | 1533 | |
33 | 4V6D|1|AA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.81 | 1533 | |
34 | 4WOI|1|AA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 1538 | |
35 | 4V9C|1|CA | Allosteric control of the ribosome by small-molecule antibiotics | X-RAY DIFFRACTION | 3.3 | 1538 | |
36 | 5KPX|1|26 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure IV) | ELECTRON MICROSCOPY | 3.9 | 1539 | |
37 | 5AFI|1|a | 2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EM | ELECTRON MICROSCOPY | 2.9 | 1528 | |
38 | 5LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|x | Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C) | ELECTRON MICROSCOPY | 3.5 | 1528 | |
39 | 5LZD|1|a | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA) | ELECTRON MICROSCOPY | 3.4 | 1528 | |
40 | 4WOI|1|DA | 4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2 | X-RAY DIFFRACTION | 3 | 1539 | |
41 | 4V9C|1|AA | Allosteric control of the ribosome by small-molecule antibiotics | X-RAY DIFFRACTION | 3.3 | 1539 | |
42 | 4V9D|1|BA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 1539 | |
43 | 5JTE|1|AA | Cryo-EM structure of an ErmBL-stalled ribosome in complex with A-, P-, and E-tRNA | ELECTRON MICROSCOPY | 3.6 | 1539 | |
44 | 5JU8|1|AA | Cryo-EM structure of an ErmBL-stalled ribosome in complex with P-, and E-tRNA | ELECTRON MICROSCOPY | 3.6 | 1539 | |
45 | 5KCR|1|1a | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Avilamycin C, mRNA and P-site tRNA at 3.6A resolution | ELECTRON MICROSCOPY | 3.6 | 1539 | |
46 | 5MDV|1|2 | Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state) | ELECTRON MICROSCOPY | 2.97 | 1523 | |
47 | 5MDZ|1|2 | Structure of the 70S ribosome (empty A site) | ELECTRON MICROSCOPY | 3.1 | 1523 | |
48 | 5MDW|1|2 | Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state) | ELECTRON MICROSCOPY | 3.06 | 1523 | |
49 | 5MDY|1|2 | Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state) | ELECTRON MICROSCOPY | 3.35 | 1523 | |
50 | 5MGP|1|a | Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAs | ELECTRON MICROSCOPY | 3.1 | 1539 | |
51 | 5LZA|1|a | Structure of the 70S ribosome with SECIS-mRNA and P-site tRNA (Initial complex, IC) | ELECTRON MICROSCOPY | 3.6 | 1532 | |
52 | 5LZC|1|a | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the codon reading state (CR) | ELECTRON MICROSCOPY | 4.8 | 1528 | |
53 | 5LZB|1|a | Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB) | ELECTRON MICROSCOPY | 5.3 | 1528 | |
54 | 3JCD|1|a | Structure of Escherichia coli EF4 in posttranslocational ribosomes (Post EF4) | ELECTRON MICROSCOPY | 3.7 | 1533 | |
55 | 5H5U|1|h | Mechanistic insights into the alternative translation termination by ArfA and RF2 | ELECTRON MICROSCOPY | 3.01 | 1534 | |
56 | 3J9Y|1|a | Cryo-EM structure of tetracycline resistance protein TetM bound to a translating E.coli ribosome | ELECTRON MICROSCOPY | 3.9 | 1528 | |
57 | 5KCS|1|1a | Cryo-EM structure of the Escherichia coli 70S ribosome in complex with antibiotic Evernimycin, mRNA, TetM and P-site tRNA at 3.9A resolution | ELECTRON MICROSCOPY | 3.9 | 1528 | |
58 | 5L3P|1|a | Cryo-EM structure of stringent response factor RelA bound to ErmCL-stalled ribosome complex | ELECTRON MICROSCOPY | 3.7 | 1528 | |
59 | 5KPW|1|26 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure III) | ELECTRON MICROSCOPY | 3.9 | 1539 | |
60 | 5KPS|1|27 | Structure of RelA bound to ribosome in absence of A/R tRNA (Structure I) | ELECTRON MICROSCOPY | 3.9 | 1539 | |
61 | 5KPV|1|26 | Structure of RelA bound to ribosome in presence of A/R tRNA (Structure II) | ELECTRON MICROSCOPY | 4.1 | 1539 | |
62 | 5U9F|1|A | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II) | ELECTRON MICROSCOPY | 3.2 | 1539 | |
63 | 5U9G|1|A | 3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I) | ELECTRON MICROSCOPY | 3.2 | 1539 | |
64 | 3J9Z|1|SA | Activation of GTP Hydrolysis in mRNA-tRNA Translocation by Elongation Factor G | ELECTRON MICROSCOPY | 3.6 | 1542 | |
65 | 4V6V|1|AA | Tetracycline resistance protein Tet(O) bound to the ribosome | ELECTRON MICROSCOPY | 9.8 | 1531 | |
66 | 5U4I|1|a | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | ELECTRON MICROSCOPY | 3.5 | 1523 | |
67 | 5IQR|1|2 | Structure of RelA bound to the 70S ribosome | ELECTRON MICROSCOPY | 3 | 1522 | |
68 | 4V5H|1|AA | E.Coli 70s Ribosome Stalled During Translation Of Tnac Leader Peptide. | ELECTRON MICROSCOPY | 5.8 | 1530 | |
69 | 4V6M|1|AA | Structure of the ribosome-SecYE complex in the membrane environment | ELECTRON MICROSCOPY | 7.1 | 1542 | |
70 | 5U4J|1|a | Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to Ribosome | ELECTRON MICROSCOPY | 3.7 | 299 | |
71 | 4V6E|1|CA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.71 | 1530 | |
72 | 4V6D|1|CA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.81 | 1530 | |
73 | 4V50|1|AA | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-RAY DIFFRACTION | 3.22 | 1530 | |
74 | 4V50|1|CA | Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA. | X-RAY DIFFRACTION | 3.22 | 1530 | |
75 | 4V5B|1|BA | Structure of PDF binding helix in complex with the ribosome | X-RAY DIFFRACTION | 3.74 | 1530 | |
76 | 4V56|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-RAY DIFFRACTION | 3.93 | 1530 | |
77 | 5MY1|1|A | E. coli expressome | ELECTRON MICROSCOPY | 7.6 | 1530 | |
78 | 4V4Q|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-RAY DIFFRACTION | 3.46 | 1530 | |
79 | 4A2I|1|A | Cryo-electron Microscopy Structure of the 30S Subunit in Complex with the YjeQ Biogenesis Factor | ELECTRON MICROSCOPY | 16.5 | 1530 | |
80 | 4V4H|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-RAY DIFFRACTION | 3.46 | 1530 | |
81 | 4V54|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 3.3 | 1530 | |
82 | 4V64|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-RAY DIFFRACTION | 3.5 | 1530 | |
83 | 4V53|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-RAY DIFFRACTION | 3.54 | 1530 | |
84 | 4V55|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4 | 1530 | |
85 | 4V5Y|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4.45 | 1530 | |
86 | 4V52|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-RAY DIFFRACTION | 3.21 | 1530 | |
87 | 4V57|1|AA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-RAY DIFFRACTION | 3.5 | 1530 | |
88 | 4V7U|1|CA | Crystal structure of the E. coli ribosome bound to erythromycin. | X-RAY DIFFRACTION | 3.1 | 1530 | |
89 | 4V6C|1|CA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.19 | 1530 | |
90 | 4V7T|1|CA | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-RAY DIFFRACTION | 3.19 | 1530 | |
91 | 4V7V|1|CA | Crystal structure of the E. coli ribosome bound to clindamycin. | X-RAY DIFFRACTION | 3.29 | 1530 | |
92 | 4V7S|1|CA | Crystal structure of the E. coli ribosome bound to telithromycin. | X-RAY DIFFRACTION | 3.25 | 1530 | |
93 | 4WWW|1|XA | Crystal structure of the E. coli ribosome bound to CEM-101 | X-RAY DIFFRACTION | 3.1 | 1530 | |
94 | 4U24|1|CA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 1539 | |
95 | 4U26|1|CA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 1539 | |
96 | 4WF1|1|CA | Crystal structure of the E. coli ribosome bound to negamycin. | X-RAY DIFFRACTION | 3.09 | 1539 | |
97 | 4U1V|1|CA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 1539 | |
98 | 4U20|1|CA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 1539 | |
99 | 4U1U|1|CA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 1539 | |
100 | 4U27|1|CA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 1539 | |
101 | 4U25|1|CA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 1539 | |
102 | 4YBB|1|BA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 1522 | |
103 | 5IT8|1|BA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 3.12 | 1522 | |
104 | 5J5B|1|BA | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 1522 | |
105 | 5J91|1|BA | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 1522 | |
106 | 5J8A|1|BA | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-RAY DIFFRACTION | 3.1 | 1522 | |
107 | 5J7L|1|BA | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 1522 | |
108 | 5JC9|1|BA | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-RAY DIFFRACTION | 3.03 | 1522 | |
109 | 5J88|1|BA | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-RAY DIFFRACTION | 3.32 | 1522 | |
110 | 3JCN|1|a | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association: Initiation Complex I | ELECTRON MICROSCOPY | 4.6 | 1539 | |
111 | 3JCJ|1|g | Structures of ribosome-bound initiation factor 2 reveal the mechanism of subunit association | ELECTRON MICROSCOPY | 3.7 | 1539 | |
112 | 4V9D|1|AA | Structures of the bacterial ribosome in classical and hybrid states of tRNA binding | X-RAY DIFFRACTION | 3 | 1538 | |
113 | 4V7C|1|AA | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA structure) | ELECTRON MICROSCOPY | 7.6 | 1538 | |
114 | 4V7D|1|BA | Structure of the Ribosome with Elongation Factor G Trapped in the Pre-Translocation State (pre-translocation 70S*tRNA*EF-G structure) | ELECTRON MICROSCOPY | 7.6 | 1538 | |
115 | 5LZF|1|a | Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H) | ELECTRON MICROSCOPY | 4.6 | 1528 | |
116 | 4V9O|1|BA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
117 | 4V9O|1|FA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
118 | 4V9O|1|DA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
119 | 4V9P|1|DA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
120 | 5J88|1|AA | Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNA | X-RAY DIFFRACTION | 3.32 | 1523 | |
121 | 5IT8|1|AA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 3.12 | 1523 | |
122 | 5J91|1|AA | Structure of the Wild-type 70S E coli ribosome bound to Tigecycline | X-RAY DIFFRACTION | 2.96 | 1523 | |
123 | 5J5B|1|AA | Structure of the WT E coli ribosome bound to tetracycline | X-RAY DIFFRACTION | 2.8 | 1523 | |
124 | 5J8A|1|AA | Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecycline | X-RAY DIFFRACTION | 3.1 | 1523 | |
125 | 5J7L|1|AA | Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracycline | X-RAY DIFFRACTION | 3 | 1523 | |
126 | 5JC9|1|AA | Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNA | X-RAY DIFFRACTION | 3.03 | 1523 | |
127 | 4YBB|1|AA | High-resolution structure of the Escherichia coli ribosome | X-RAY DIFFRACTION | 2.1 | 1523 | |
128 | 4WF1|1|AA | Crystal structure of the E. coli ribosome bound to negamycin. | X-RAY DIFFRACTION | 3.09 | 1538 | |
129 | 4U1U|1|AA | Crystal structure of the E. coli ribosome bound to quinupristin. | X-RAY DIFFRACTION | 2.95 | 1538 | |
130 | 4U20|1|AA | Crystal structure of the E. coli ribosome bound to flopristin. | X-RAY DIFFRACTION | 2.9 | 1538 | |
131 | 4U1V|1|AA | Crystal structure of the E. coli ribosome bound to linopristin. | X-RAY DIFFRACTION | 3 | 1538 | |
132 | 4U27|1|AA | Crystal structure of the E. coli ribosome bound to flopristin and linopristin. | X-RAY DIFFRACTION | 2.8 | 1538 | |
133 | 4U25|1|AA | Crystal structure of the E. coli ribosome bound to virginiamycin M1. | X-RAY DIFFRACTION | 2.9 | 1538 | |
134 | 4U26|1|AA | Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin. | X-RAY DIFFRACTION | 2.8 | 1538 | |
135 | 4U24|1|AA | Crystal structure of the E. coli ribosome bound to dalfopristin. | X-RAY DIFFRACTION | 2.9 | 1538 | |
136 | 4WWW|1|QA | Crystal structure of the E. coli ribosome bound to CEM-101 | X-RAY DIFFRACTION | 3.1 | 1533 | |
137 | 4V7S|1|AA | Crystal structure of the E. coli ribosome bound to telithromycin. | X-RAY DIFFRACTION | 3.25 | 1533 | |
138 | 4V6C|1|AA | Crystal structure of the E. coli 70S ribosome in an intermediate state of ratcheting | X-RAY DIFFRACTION | 3.19 | 1533 | |
139 | 4V7T|1|AA | Crystal structure of the E. coli ribosome bound to chloramphenicol. | X-RAY DIFFRACTION | 3.19 | 1533 | |
140 | 4V7V|1|AA | Crystal structure of the E. coli ribosome bound to clindamycin. | X-RAY DIFFRACTION | 3.29 | 1533 | |
141 | 4V7U|1|AA | Crystal structure of the E. coli ribosome bound to erythromycin. | X-RAY DIFFRACTION | 3.1 | 1533 | |
142 | 4V9P|1|BA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
143 | 4V9P|1|HA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
144 | 4V9O|1|HA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
145 | 4V89|1|AA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin) | X-RAY DIFFRACTION | 3.7 | 1532 | |
146 | 4V85|1|AA | Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome. | X-RAY DIFFRACTION | 3.2 | 1532 | |
147 | 4V7B|1|AA | Visualization of two tRNAs trapped in transit during EF-G-mediated translocation | ELECTRON MICROSCOPY | 6.8 | 1533 | |
148 | 4V5Y|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with paromomycin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4.45 | 1530 | |
149 | 4V52|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin. | X-RAY DIFFRACTION | 3.21 | 1530 | |
150 | 4V55|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin and ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 4 | 1530 | |
151 | 4V53|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with gentamicin. | X-RAY DIFFRACTION | 3.54 | 1530 | |
152 | 4V4H|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution. | X-RAY DIFFRACTION | 3.46 | 1530 | |
153 | 4V4Q|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution. | X-RAY DIFFRACTION | 3.46 | 1530 | |
154 | 4V54|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF). | X-RAY DIFFRACTION | 3.3 | 1530 | |
155 | 4V64|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B. | X-RAY DIFFRACTION | 3.5 | 1530 | |
156 | 4V57|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin. | X-RAY DIFFRACTION | 3.5 | 1530 | |
157 | 4V56|1|CA | Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin. | X-RAY DIFFRACTION | 3.93 | 1530 | |
158 | 4V5B|1|DA | Structure of PDF binding helix in complex with the ribosome | X-RAY DIFFRACTION | 3.74 | 1530 | |
159 | 4V9P|1|FA | Control of ribosomal subunit rotation by elongation factor G | X-RAY DIFFRACTION | 2.9 | 1533 | |
160 | 5ME1|1|A | Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112 | ELECTRON MICROSCOPY | 13.5 | 1523 | |
161 | 2YKR|1|A | 30S ribosomal subunit with RsgA bound in the presence of GMPPNP | ELECTRON MICROSCOPY | 9.8 | 1533 | |
162 | 5UZ4|1|A | The cryo-EM structure of YjeQ bound to the 30S subunit suggests a fidelity checkpoint function for this protein in ribosome assembly | ELECTRON MICROSCOPY | 5.8 | 1527 | |
163 | 5ME0|1|A | Structure of the 30S Pre-Initiation Complex 1 (30S IC-1) Stalled by GE81112 | ELECTRON MICROSCOPY | 13.5 | 1523 | |
164 | 4ADV|1|A | Structure of the E. coli methyltransferase KsgA bound to the E. coli 30S ribosomal subunit | ELECTRON MICROSCOPY | 13.5 | 1410 | |
165 | 3J2A|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 13.1 | 1533 | |
166 | 3J2C|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 13.2 | 927 | |
167 | 3J29|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 14 | 1533 | |
168 | 3J2G|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 16.5 | 1533 | |
169 | 4V6T|1|AA | Structure of the bacterial ribosome complexed by tmRNA-SmpB and EF-G during translocation and MLD-loading | ELECTRON MICROSCOPY | 8.3 | 1538 | |
170 | 3J2B|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 13.6 | 1533 | |
171 | 3J2F|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 17.6 | 1533 | |
172 | 3J2E|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 15.3 | 1533 | |
173 | 3J28|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 12.9 | 1533 | |
174 | 3J2D|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 18.7 | 1533 | |
175 | 3J2H|1|N | Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM | ELECTRON MICROSCOPY | 18.8 | 1533 | |
176 | 4V48|1|BA | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the initiation-like state of E. coli 70S ribosome | ELECTRON MICROSCOPY | 11.5 | 1487 | |
177 | 4V47|1|BA | Real space refined coordinates of the 30S and 50S subunits fitted into the low resolution cryo-EM map of the EF-G.GTP state of E. coli 70S ribosome | ELECTRON MICROSCOPY | 12.3 | 1487 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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