#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16TB3|1|n (rep)Transfer RNAmRNA, tRNASaccharomyces cerevisiaeEukaryaRF00005yeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexElectron microscopy2.82020-04-22
27B7D|1|SmTransfer RNAmRNA, tRNASaccharomyces cerevisiae S288CEukaryaRF00005Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsElectron microscopy3.32021-03-10
37B7D|1|SnTransfer RNAmRNA, tRNASaccharomyces cerevisiae S288CEukaryaRF00005Yeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsElectron microscopy3.32021-03-10
46TNU|1|nTransfer RNAmRNA, P-site tRNASaccharomyces cerevisiaeEukaryaRF00005Yeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.Electron microscopy3.12020-04-22
57NRD|1|SnTransfer RNAtRNA (75-MER)Saccharomyces cerevisiae S288CEukaryaRF00005Structure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNAElectron microscopy4.362021-04-14
65OA3|1|1Transfer RNAinitiator Met-tRNA-iSaccharomyces cerevisiaeEukaryaRF00005Human 40S-eIF2D-re-initiation complexElectron microscopy4.22017-08-09

Release history

Release3.1743.1753.176
Date2021-04-142021-04-212021-04-28

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_74880.2NR_20.0_74880.13.174(5) 5OA3|1|1, 6TB3|1|n, 6TNU|1|n, 7B7D|1|Sm, 7B7D|1|Sn(1) 7NRD|1|Sn(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_20.0_74880.2NR_20.0_74880.33.177(6) 5OA3|1|1, 6TB3|1|n, 6TNU|1|n, 7B7D|1|Sm, 7B7D|1|Sn, 7NRD|1|Sn(0) (1) 7NRC|1|Sn

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17B7D|1|SmYeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsELECTRON MICROSCOPY3.375
27B7D|1|SnYeast 80S ribosome bound to eEF3 and A/A- and P/P-tRNAsELECTRON MICROSCOPY3.375
36TB3|1|nyeast 80S ribosome in complex with the Not5 subunit of the CCR4-NOT complexELECTRON MICROSCOPY2.866
46TNU|1|nYeast 80S ribosome in complex with eIF5A and decoding A-site and P-site tRNAs.ELECTRON MICROSCOPY3.168
57NRD|1|SnStructure of the yeast Gcn1 bound to a colliding stalled 80S ribosome with MBF1, A/P-tRNA and P/E-tRNAELECTRON MICROSCOPY4.3675
65OA3|1|1Human 40S-eIF2D-re-initiation complexELECTRON MICROSCOPY4.275

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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