#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17XSP|1|D+ 7XSP|1|A (rep)RNA (35-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3')Candidatus Scalindua brodaeStructure of gRAMP-target RNAElectron microscopy2.892022-11-09
27XSQ|1|DRNA (34-MER)Candidatus Scalindua brodaeStructure of the CraspaseElectron microscopy2.882022-11-09
37XSO|1|DRNA (35-MER)Candidatus Scalindua brodaeStructure of the type III-E CRISPR-Cas effector gRAMPElectron microscopy3.012023-03-22
47XSR|1|D+ 7XSR|1|ARNA (34-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*G)-3')Candidatus Scalindua brodaeStructure of Craspase-target RNAElectron microscopy2.972022-11-09
57XSS|1|D+ 7XSS|1|ARNA (34-MER), RNA (5'-R(P*GP*GP*GP*GP*CP*AP*GP*AP*AP*AP*AP*UP*UP*GP*GP*AP*CP*GP*AP*U)-3')Candidatus Scalindua brodaeStructure of Craspase-CTRElectron microscopy3.22022-11-09

Release history

Release3.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.360
Date2023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-06

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_20.0_87221.2NR_20.0_87221.13.275(4) 7XSP|1|D+7XSP|1|A, 7XSQ|1|D, 7XSR|1|D+7XSR|1|A, 7XSS|1|D+7XSS|1|A(1) 7XSO|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17XSS|1|D+ 7XSS|1|AStructure of Craspase-CTRELECTRON MICROSCOPY3.234
27XSR|1|D+ 7XSR|1|AStructure of Craspase-target RNAELECTRON MICROSCOPY2.9734
37XSP|1|D+ 7XSP|1|AStructure of gRAMP-target RNAELECTRON MICROSCOPY2.8935
47XSQ|1|DStructure of the CraspaseELECTRON MICROSCOPY2.8834
57XSO|1|DStructure of the type III-E CRISPR-Cas effector gRAMPELECTRON MICROSCOPY3.0135

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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