#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18B2L|1|h1 (rep)Small subunit ribosomal RNA18S rRNANicotiana tabacumEukaryaRF01960Cryo-EM structure of the plant 80S ribosomeElectron microscopy2.22023-08-23
28AUV|1|hSmall subunit ribosomal RNA18S rRNANicotiana tabacumEukaryaRF01960Cryo-EM structure of the plant 40S subunitElectron microscopy2.382023-06-07
37QIZ|1|S2Small subunit ribosomal RNA18SSolanum lycopersicumEukaryaRF01960Specific features and methylation sites of a plant 80S ribosomeElectron microscopy2.382022-08-03
48IP8|1|aaSmall subunit ribosomal RNA18S ribosomal RNATriticum aestivumEukaryaRF01960Wheat 80S ribosome stalled on AUG-Stop boron dependentlyElectron microscopy2.92024-02-21
58IP9|1|aaSmall subunit ribosomal RNA18S ribosomal RNATriticum aestivumEukaryaRF01960Wheat 40S ribosome in complex with a tRNAiElectron microscopy32024-02-21
68IPB|1|aaSmall subunit ribosomal RNA18S ribosomal RNATriticum aestivumEukaryaRF01960Wheat 80S ribosome pausing on AUG-Stop with cycloheximideElectron microscopy3.42024-02-21
78IPA|1|aaSmall subunit ribosomal RNA18S ribosomal RNATriticum aestivumEukaryaRF01960Wheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximideElectron microscopy3.42024-02-21
88R6F|1|ASmall subunit ribosomal RNARNA (1177-MER)Triticum aestivumEukaryaRF01960CryoEM structure of wheat 40S ribosomal subunit, body domainElectron microscopy2.342023-12-27
97QIX|1|2Small subunit ribosomal RNA18S rRNA bodySolanum lycopersicumEukaryaRF01960Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit.Electron microscopy2.532022-06-15
104V7E|1|AdSmall subunit ribosomal RNA18S ribosomal RNATriticum aestivumEukaryaRF01960Model of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosomeElectron microscopy5.52014-07-09
117QIY|1|2Small subunit ribosomal RNA18S rRNA headSolanum lycopersicumEukaryaRF01960Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit.Electron microscopy2.582022-06-15
128R57|1|ASmall subunit ribosomal RNARNA (458-MER)Triticum aestivumEukaryaRF01960CryoEM structure of wheat 40S ribosomal subunit, head domainElectron microscopy2.552023-12-27

Release history

Release3.3233.3243.3253.3263.327
Date2024-02-212024-02-282024-03-062024-03-132024-03-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18R6F|1|ACryoEM structure of wheat 40S ribosomal subunit, body domainELECTRON MICROSCOPY2.341122
27QIX|1|2Specific features and methylation sites of a plant ribosome. 40S body ribosomal subunit.ELECTRON MICROSCOPY2.531060
37QIZ|1|S2Specific features and methylation sites of a plant 80S ribosomeELECTRON MICROSCOPY2.381507
48AUV|1|hCryo-EM structure of the plant 40S subunitELECTRON MICROSCOPY2.381545
58B2L|1|h1Cryo-EM structure of the plant 80S ribosomeELECTRON MICROSCOPY2.21545
68IP9|1|aaWheat 40S ribosome in complex with a tRNAiELECTRON MICROSCOPY31695
78IP8|1|aaWheat 80S ribosome stalled on AUG-Stop boron dependentlyELECTRON MICROSCOPY2.91695
88IPA|1|aaWheat 80S ribosome stalled on AUG-Stop boron dependently with cycloheximideELECTRON MICROSCOPY3.41695
98IPB|1|aaWheat 80S ribosome pausing on AUG-Stop with cycloheximideELECTRON MICROSCOPY3.41695
104V7E|1|AdModel of the small subunit RNA based on a 5.5 A cryo-EM map of Triticum aestivum translating 80S ribosomeELECTRON MICROSCOPY5.51762
117QIY|1|2Specific features and methylation sites of a plant ribosome. 40S head ribosomal subunit.ELECTRON MICROSCOPY2.58447
128R57|1|ACryoEM structure of wheat 40S ribosomal subunit, head domainELECTRON MICROSCOPY2.55429

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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