Equivalence class NR_20.0_97539.5 Obsolete
| # | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
|---|---|---|---|---|---|---|---|---|---|---|
| 1 | 8FR8|1|a (rep) | Small subunit ribosomal RNA | 16S rRNA (1511-MER) | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex | Electron microscopy | 2.76 | 2023-05-17 |
| 2 | 8WHX|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH. | Electron microscopy | 2.8 | 2024-02-28 |
| 3 | 8WIF|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome and RafH. | Electron microscopy | 2.9 | 2024-02-28 |
| 4 | 8V9L|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6) | Electron microscopy | 3 | 2024-02-07 |
| 5 | 8V9K|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5) | Electron microscopy | 3.1 | 2024-02-07 |
| 6 | 8V9J|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4) | Electron microscopy | 3.1 | 2024-02-07 |
| 7 | 5ZEB|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | M. Smegmatis P/P state 70S ribosome structure | Electron microscopy | 3.4 | 2018-09-26 |
| 8 | 5ZEP|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | M. smegmatis hibernating state 70S ribosome structure | Electron microscopy | 3.4 | 2018-09-26 |
| 9 | 6DZI|1|h | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | Electron microscopy | 3.46 | 2018-09-26 |
| 10 | 8WID|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, E- tRNA and RafH. | Electron microscopy | 3.5 | 2024-02-28 |
| 11 | 8WIB|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH. | Electron microscopy | 3.5 | 2024-02-28 |
| 12 | 8WI9|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, bS1 and RafH. | Electron microscopy | 3.5 | 2024-02-28 |
| 13 | 8WI7|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis MC2 155 | Bacteria | RF00177 | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH. | Electron microscopy | 3.5 | 2024-02-28 |
| 14 | 5O5J|1|A | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Structure of the 30S small ribosomal subunit from Mycobacterium smegmatis | Electron microscopy | 3.45 | 2017-07-12 |
| 15 | 5ZEU|1|a | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | M. smegmatis P/P state 30S ribosomal subunit | Electron microscopy | 3.7 | 2018-09-26 |
| 16 | 6DZK|1|A | Small subunit ribosomal RNA | 16S rRNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY | Electron microscopy | 3.6 | 2018-09-19 |
| 17 | 5XYU|1|A | Small subunit ribosomal RNA | 16S RNA | Mycolicibacterium smegmatis | Bacteria | RF00177 | Small subunit of Mycobacterium smegmatis ribosome | Electron microscopy | 3.45 | 2017-09-27 |
Release history
| Release | 3.333 | 3.334 | 3.335 | 3.336 | 3.337 | 3.338 | 3.339 | 3.340 | 3.341 | 3.342 | 3.343 | 3.344 | 3.345 | 3.346 | 3.347 | 3.348 | 3.349 | 3.350 | 3.351 | 3.352 | 3.353 | 3.354 | 3.355 | 3.356 | 3.357 | 3.358 | 3.359 | 3.360 | 3.361 | 3.362 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Date | 2024-05-01 | 2024-05-08 | 2024-05-15 | 2024-05-22 | 2024-05-29 | 2024-06-05 | 2024-06-12 | 2024-06-19 | 2024-06-26 | 2024-07-03 | 2024-07-10 | 2024-07-17 | 2024-07-25 | 2024-07-31 | 2024-08-07 | 2024-08-14 | 2024-08-21 | 2024-08-28 | 2024-09-04 | 2024-09-11 | 2024-09-18 | 2024-09-25 | 2024-10-02 | 2024-10-09 | 2024-10-16 | 2024-10-23 | 2024-10-30 | 2024-11-06 | 2024-11-13 | 2024-11-20 |
Parents
| This class | Parent classes | Release id | Intersection | Added to this class | Only in parent |
|---|
Children
| This class | Descendant classes | Release id | Intersection | Only in this class | Added to child |
|---|
Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
| #S | View | PDB | Title | Method | Resolution | Length |
|---|---|---|---|---|---|---|
| 1 | 5XYU|1|A | Small subunit of Mycobacterium smegmatis ribosome | ELECTRON MICROSCOPY | 3.45 | 1379 | |
| 2 | 8FR8|1|a | Structure of Mycobacterium smegmatis Rsh bound to a 70S translation initiation complex | ELECTRON MICROSCOPY | 2.76 | 1511 | |
| 3 | 5ZEB|1|a | M. Smegmatis P/P state 70S ribosome structure | ELECTRON MICROSCOPY | 3.4 | 1506 | |
| 4 | 5ZEU|1|a | M. smegmatis P/P state 30S ribosomal subunit | ELECTRON MICROSCOPY | 3.7 | 1506 | |
| 5 | 5ZEP|1|a | M. smegmatis hibernating state 70S ribosome structure | ELECTRON MICROSCOPY | 3.4 | 1506 | |
| 6 | 5O5J|1|A | Structure of the 30S small ribosomal subunit from Mycobacterium smegmatis | ELECTRON MICROSCOPY | 3.45 | 1511 | |
| 7 | 8WHX|1|a | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH. | ELECTRON MICROSCOPY | 2.8 | 1515 | |
| 8 | 8WIF|1|a | Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome and RafH. | ELECTRON MICROSCOPY | 2.9 | 1517 | |
| 9 | 8WID|1|a | Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, E- tRNA and RafH. | ELECTRON MICROSCOPY | 3.5 | 1515 | |
| 10 | 8WIB|1|a | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH. | ELECTRON MICROSCOPY | 3.5 | 1515 | |
| 11 | 8WI9|1|a | Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, bS1 and RafH. | ELECTRON MICROSCOPY | 3.5 | 1515 | |
| 12 | 8WI7|1|a | Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH. | ELECTRON MICROSCOPY | 3.5 | 1515 | |
| 13 | 6DZI|1|h | Cryo-EM Structure of Mycobacterium smegmatis 70S C(minus) ribosome 70S-MPY complex | ELECTRON MICROSCOPY | 3.46 | 1511 | |
| 14 | 6DZK|1|A | Cryo-EM Structure of Mycobacterium smegmatis C(minus) 30S ribosomal subunit with MPY | ELECTRON MICROSCOPY | 3.6 | 1511 | |
| 15 | 8V9K|1|a | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5) | ELECTRON MICROSCOPY | 3.1 | 1511 | |
| 16 | 8V9L|1|a | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6) | ELECTRON MICROSCOPY | 3 | 1511 | |
| 17 | 8V9J|1|a | Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4) | ELECTRON MICROSCOPY | 3.1 | 1511 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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