#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18PV7|1|C3 (rep)ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structureElectron microscopy2.122023-11-15
28PVK|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structureElectron microscopy2.552023-12-06
38PV1|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structureElectron microscopy2.562023-11-15
48PV3|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structureElectron microscopy2.82023-11-15
58PV4|1|C3ITS2Thermochaetoides thermophila DSM 1495Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structureElectron microscopy2.92023-11-15

Release history

Release3.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.360
Date2023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-06

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18PV4|1|C3Chaetomium thermophilum pre-60S State 2 - pre-5S rotation with Rix1 complex - composite structureELECTRON MICROSCOPY2.982
28PV1|1|C3Chaetomium thermophilum pre-60S State 6 - pre-5S rotation - L1 intermediate - composite structureELECTRON MICROSCOPY2.5682
38PV7|1|C3Chaetomium thermophilum pre-60S State 1 - pre-5S rotation (Arx1/Nog2 state) - Composite structureELECTRON MICROSCOPY2.1282
48PV3|1|C3Chaetomium thermophilum pre-60S State 9 - pre-5S rotation - immature H68/H69 - composite structureELECTRON MICROSCOPY2.882
58PVK|1|C3Chaetomium thermophilum pre-60S State 5 - pre-5S rotation - L1 inward - composite structureELECTRON MICROSCOPY2.5582

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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