#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
11J8G|1|D (rep)5'-R(*UP*GP*GP*GP*GP*U)-3'X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-ray diffraction0.612001-11-23
24RKV|1|ARNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction0.882014-11-19
34RNE|1|ARNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
44RNE|1|FRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
51J8G|1|A5'-R(*UP*GP*GP*GP*GP*U)-3'X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-ray diffraction0.612001-11-23
64RJ1|1|ARNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction0.922014-11-12
74RNE|1|BRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
81J8G|1|C5'-R(*UP*GP*GP*GP*GP*U)-3'X-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-ray diffraction0.612001-11-23
94XK0|1|CRNA (5'-(*UP*GP*GP*GP*GP*U)-3')synthetic constructCrystal structure of a tetramolecular RNA G-quadruplex in potassiumX-ray diffraction1.082015-02-11
104RNE|1|CRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
114RNE|1|DRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
124RNE|1|ERNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
134RNE|1|GRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19
144RNE|1|HRNA (5'-R(*UP*GP*GP*GP*GP*U)-3')synthetic constructStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-ray diffraction1.012014-11-19

Release history

Release2.932.942.952.962.972.982.992.1002.1012.1022.1032.1042.1052.1062.1072.1082.1092.1102.1112.1122.1132.1142.1152.1162.1172.1182.1192.1202.1212.1222.1232.1242.1252.1262.1272.1282.1292.1302.1312.1322.1332.1342.1352.1362.1372.1382.1392.1402.1412.1422.1432.1442.1452.1462.1472.1482.1492.1502.1512.1522.1532.1542.1552.1562.1572.158
Date2016-09-162016-09-232016-09-302016-10-072016-10-142016-10-212016-10-282016-11-042016-11-112016-11-182016-11-252016-12-022016-12-092016-12-162016-12-232016-12-302017-01-062017-01-132017-01-202017-01-272017-02-032017-02-102017-02-172017-02-242017-03-032017-03-102017-03-172017-03-242017-03-312017-04-112017-04-152017-04-262017-04-292017-05-092017-05-152017-05-202017-05-272017-06-072017-06-112017-06-212017-06-242017-06-282017-07-042017-07-102017-07-152017-07-262017-07-312017-08-052017-08-122017-08-192017-08-262017-09-032017-09-092017-09-162017-09-232017-09-302017-10-072017-10-142017-10-212017-10-282017-11-032017-11-102017-11-172017-11-242017-12-012017-12-08

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_31074.1NR_3.0_74981.12.93(14) 1J8G|1|A, 1J8G|1|C, 1J8G|1|D, 4RJ1|1|A, 4RKV|1|A, 4RNE|1|A, 4RNE|1|B, 4RNE|1|C, 4RNE|1|D, 4RNE|1|E, 4RNE|1|F, 4RNE|1|G, 4RNE|1|H, 4XK0|1|C(0) (4) 1J8G|1|B, 4RJ1|1|B, 4RKV|1|B, 4XK0|1|A

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_31074.1NR_3.0_31074.23.0(13) 1J8G|1|A, 1J8G|1|C, 1J8G|1|D, 4RJ1|1|A, 4RKV|1|A, 4RNE|1|A, 4RNE|1|B, 4RNE|1|C, 4RNE|1|D, 4RNE|1|E, 4RNE|1|F, 4RNE|1|G, 4RNE|1|H(1) 4XK0|1|C(0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
11J8G|1|DX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
24RJ1|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION0.926
31J8G|1|CX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
44RNE|1|GStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
54RNE|1|HStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
64RNE|1|EStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
74RNE|1|FStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.019
84RNE|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.019
94RNE|1|CStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
104RKV|1|AStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION0.8810
114RNE|1|DStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
124RNE|1|BStructural variations and solvent structure of UGGGGU quadruplexes stabilized by Sr2+ ionsX-RAY DIFFRACTION1.016
131J8G|1|AX-ray Analysis of a RNA Tetraplex r(uggggu)4 at Ultra-High ResolutionX-RAY DIFFRACTION0.616
144XK0|1|CCrystal structure of a tetramolecular RNA G-quadruplex in potassiumX-RAY DIFFRACTION1.086

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

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