#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15FDV|1|1B (rep)5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-01-27
25FDU|1|1B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92016-01-27
34Y4O|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
44Y4O|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-ray diffraction2.32015-03-18
55IBB|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
65HCQ|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
74WPO|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
85E81|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-ray diffraction2.952016-01-27
96CFL|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-ray diffraction2.62018-03-07
106CAE|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-04-18
115FDV|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-01-27
125IB7|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
134V8I|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
145FDU|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92016-01-27
155IBB|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
166XHX|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolutionX-ray diffraction2.552020-12-23
175W4K|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
185E81|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-ray diffraction2.952016-01-27
196CFK|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-ray diffraction2.72018-03-07
204WQU|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
216XHY|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
225NDK|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
234WSD|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
245HCR|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
255NDK|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
266OF1|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.82019-04-17
276XHX|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolutionX-ray diffraction2.552020-12-23
285J4B|1|1B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
294LNT|1|YB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
306CFJ|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82018-03-07
314WQF|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
325IB7|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
334V8D|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
344V8G|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
356XHY|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
364W2G|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
376XHW|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
385J4C|1|1B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
394Z8C|1|1B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
405J4B|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
416CFL|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-ray diffraction2.62018-03-07
424V9R|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
435HD1|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
447MD7|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolutionX-ray diffraction2.82021-04-21
455HCP|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
464V9H|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-ray diffraction2.862014-07-09
476ND5|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
486XHV|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
494W2I|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
504V8D|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
515WIS|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
524Z3S|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
534WQY|1|AB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
546CAE|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-04-18
554Z8C|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
564LNT|1|RB5S ribosomal RNA5S rRNAThermus thermophilusBacteriaRF00001Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
571VY4|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
585HAU|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
594WPO|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
604V8B|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
615J8B|1|B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.62016-05-25
624W2H|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
636O97|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.752019-04-17
644WSD|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
656XQD|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.82020-08-05
666CFK|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-ray diffraction2.72018-03-07
675J4C|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
685HAU|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
695HCQ|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
706OF1|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.82019-04-17
716XHV|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
721VY7|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
734W2F|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
745WIT|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
756CFJ|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82018-03-07
765W4K|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
776XHW|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
781VY5|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
794W2I|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
804Y4P|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
815DOY|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
824V8G|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of RMF bound to the 70S ribosome.X-ray diffraction32014-07-09
834W2G|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
844WQF|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
857MD7|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilus HB8BacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolutionX-ray diffraction2.82021-04-21
865HCR|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
874Z3S|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
884V9R|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
897JQL|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-26
906ND5|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
916O97|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.752019-04-17
925HD1|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
936ND6|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.852019-02-20
946UO1|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
954W2F|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
961VY6|1|BB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
975WIS|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
984WQU|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
991VY4|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1004WQY|1|CB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1016XQD|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.82020-08-05
1024V8B|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
1035F8K|1|1B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1045DOY|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
1054V90|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Thermus thermophilus RibosomeX-ray diffraction2.952014-07-09
1065HCP|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
1074Y4P|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1084W2H|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
1096UO1|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1104V51|1|BB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1116XQE|1|1B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-05
1121VY5|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
1134W2E|1|B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92014-10-01
1146ND6|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.852019-02-20
1157JQL|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-26
1164V51|1|DB5S ribosomal RNA5S RIBOSOMAL RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1175WIT|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
1184V8I|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of YfiA bound to the 70S ribosome.X-ray diffraction2.72014-07-09
1194V7L|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1201VY6|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
1216XQE|1|2B5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-05
1221VY7|1|DB5S ribosomal RNA5S Ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1234V7L|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1245F8K|1|2B5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1254V7Y|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
1264V67|1|BB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
1274V7X|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
1284V7W|1|BB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
1294V7Y|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-ray diffraction32014-07-09
1304V67|1|DB5S ribosomal RNA5S RRNAThermus thermophilusBacteriaRF00001Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
1314V7W|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-ray diffraction32014-07-09
1324V7X|1|DB5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of the Thermus thermophilus ribosome complexed with erythromycin.X-ray diffraction32014-07-09
1336GSJ|1|165S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.962018-07-04
1346GSJ|1|1J5S ribosomal RNA5S ribosomal RNAThermus thermophilusBacteriaRF00001Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.962018-07-04

Release history

Release3.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.1953.1963.1973.1983.199
Date2021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-082021-09-152021-09-222021-09-292021-10-06

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_42622.55NR_3.0_42622.543.181(134) 1VY4|1|BB, 1VY4|1|DB, 1VY5|1|BB, 1VY5|1|DB, 1VY6|1|BB, 1VY6|1|DB, 1VY7|1|BB, 1VY7|1|DB, 4LNT|1|RB, 4LNT|1|YB, 4V51|1|BB, 4V51|1|DB, 4V67|1|BB, 4V67|1|DB, 4V7L|1|BB, 4V7L|1|DB, 4V7W|1|BB, 4V7W|1|DB, 4V7X|1|BB, 4V7X|1|DB, 4V7Y|1|BB, 4V7Y|1|DB, 4V8B|1|BB, 4V8B|1|DB, 4V8D|1|BB, 4V8D|1|DB, 4V8G|1|BB, 4V8G|1|DB, 4V8I|1|BB, 4V8I|1|DB, 4V90|1|BB, 4V9H|1|BB, 4V9R|1|BB, 4V9R|1|DB, 4W2E|1|B, 4W2F|1|BB, 4W2F|1|DB, 4W2G|1|BB, 4W2G|1|DB, 4W2H|1|BB, 4W2H|1|DB, 4W2I|1|BB, 4W2I|1|DB, 4WPO|1|AB, 4WPO|1|CB, 4WQF|1|AB, 4WQF|1|CB, 4WQU|1|AB, 4WQU|1|CB, 4WQY|1|AB, 4WQY|1|CB, 4WSD|1|16, 4WSD|1|1J, 4Y4O|1|1B, 4Y4O|1|2B, 4Y4P|1|1B, 4Y4P|1|2B, 4Z3S|1|1B, 4Z3S|1|2B, 4Z8C|1|1B, 4Z8C|1|2B, 5DOY|1|1B, 5DOY|1|2B, 5E81|1|16, 5E81|1|1J, 5F8K|1|1B, 5F8K|1|2B, 5FDU|1|1B, 5FDU|1|2B, 5FDV|1|1B, 5FDV|1|2B, 5HAU|1|1B, 5HAU|1|2B, 5HCP|1|1B, 5HCP|1|2B, 5HCQ|1|1B, 5HCQ|1|2B, 5HCR|1|1B, 5HCR|1|2B, 5HD1|1|1B, 5HD1|1|2B, 5IB7|1|16, 5IB7|1|1J, 5IBB|1|16, 5IBB|1|1J, 5J4B|1|1B, 5J4B|1|2B, 5J4C|1|1B, 5J4C|1|2B, 5J8B|1|B, 5NDK|1|16, 5NDK|1|1J, 5W4K|1|1B, 5W4K|1|2B, 5WIS|1|1B, 5WIS|1|2B, 5WIT|1|1B, 5WIT|1|2B, 6CAE|1|1B, 6CAE|1|2B, 6CFJ|1|1B, 6CFJ|1|2B, 6CFK|1|1B, 6CFK|1|2B, 6CFL|1|1B, 6CFL|1|2B, 6GSJ|1|16, 6GSJ|1|1J, 6ND5|1|1B, 6ND5|1|2B, 6ND6|1|1B, 6ND6|1|2B, 6O97|1|1B, 6O97|1|2B, 6OF1|1|1B, 6OF1|1|2B, 6UO1|1|1B, 6UO1|1|2B, 6XHV|1|1B, 6XHV|1|2B, 6XHW|1|1B, 6XHW|1|2B, 6XHX|1|1B, 6XHX|1|2B, 6XHY|1|1B, 6XHY|1|2B, 6XQD|1|1B, 6XQD|1|2B, 6XQE|1|1B, 6XQE|1|2B, 7JQL|1|1B, 7JQL|1|2B, 7MD7|1|1B, 7MD7|1|2B(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_42622.55NR_3.0_42622.563.200(134) 1VY4|1|BB, 1VY4|1|DB, 1VY5|1|BB, 1VY5|1|DB, 1VY6|1|BB, 1VY6|1|DB, 1VY7|1|BB, 1VY7|1|DB, 4LNT|1|RB, 4LNT|1|YB, 4V51|1|BB, 4V51|1|DB, 4V67|1|BB, 4V67|1|DB, 4V7L|1|BB, 4V7L|1|DB, 4V7W|1|BB, 4V7W|1|DB, 4V7X|1|BB, 4V7X|1|DB, 4V7Y|1|BB, 4V7Y|1|DB, 4V8B|1|BB, 4V8B|1|DB, 4V8D|1|BB, 4V8D|1|DB, 4V8G|1|BB, 4V8G|1|DB, 4V8I|1|BB, 4V8I|1|DB, 4V90|1|BB, 4V9H|1|BB, 4V9R|1|BB, 4V9R|1|DB, 4W2E|1|B, 4W2F|1|BB, 4W2F|1|DB, 4W2G|1|BB, 4W2G|1|DB, 4W2H|1|BB, 4W2H|1|DB, 4W2I|1|BB, 4W2I|1|DB, 4WPO|1|AB, 4WPO|1|CB, 4WQF|1|AB, 4WQF|1|CB, 4WQU|1|AB, 4WQU|1|CB, 4WQY|1|AB, 4WQY|1|CB, 4WSD|1|16, 4WSD|1|1J, 4Y4O|1|1B, 4Y4O|1|2B, 4Y4P|1|1B, 4Y4P|1|2B, 4Z3S|1|1B, 4Z3S|1|2B, 4Z8C|1|1B, 4Z8C|1|2B, 5DOY|1|1B, 5DOY|1|2B, 5E81|1|16, 5E81|1|1J, 5F8K|1|1B, 5F8K|1|2B, 5FDU|1|1B, 5FDU|1|2B, 5FDV|1|1B, 5FDV|1|2B, 5HAU|1|1B, 5HAU|1|2B, 5HCP|1|1B, 5HCP|1|2B, 5HCQ|1|1B, 5HCQ|1|2B, 5HCR|1|1B, 5HCR|1|2B, 5HD1|1|1B, 5HD1|1|2B, 5IB7|1|16, 5IB7|1|1J, 5IBB|1|16, 5IBB|1|1J, 5J4B|1|1B, 5J4B|1|2B, 5J4C|1|1B, 5J4C|1|2B, 5J8B|1|B, 5NDK|1|16, 5NDK|1|1J, 5W4K|1|1B, 5W4K|1|2B, 5WIS|1|1B, 5WIS|1|2B, 5WIT|1|1B, 5WIT|1|2B, 6CAE|1|1B, 6CAE|1|2B, 6CFJ|1|1B, 6CFJ|1|2B, 6CFK|1|1B, 6CFK|1|2B, 6CFL|1|1B, 6CFL|1|2B, 6GSJ|1|16, 6GSJ|1|1J, 6ND5|1|1B, 6ND5|1|2B, 6ND6|1|1B, 6ND6|1|2B, 6O97|1|1B, 6O97|1|2B, 6OF1|1|1B, 6OF1|1|2B, 6UO1|1|1B, 6UO1|1|2B, 6XHV|1|1B, 6XHV|1|2B, 6XHW|1|1B, 6XHW|1|2B, 6XHX|1|1B, 6XHX|1|2B, 6XHY|1|1B, 6XHY|1|2B, 6XQD|1|1B, 6XQD|1|2B, 6XQE|1|1B, 6XQE|1|2B, 7JQL|1|1B, 7JQL|1|2B, 7MD7|1|1B, 7MD7|1|2B(0) (4) 7RQ8|1|1B, 7RQ8|1|2B, 7RQ9|1|1B, 7RQ9|1|2B

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14V9H|1|BBCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.86119
24V90|1|BBThermus thermophilus RibosomeX-RAY DIFFRACTION2.95119
34V67|1|DBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
44V67|1|BBCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION3119
55NDK|1|16Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.95122
64LNT|1|YBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
76GSJ|1|16Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.96122
85IB7|1|16Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.99122
95E81|1|16Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.95122
105IBB|1|16Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.96122
114WSD|1|16Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.95122
124V8D|1|BBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
134V8B|1|BBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
144LNT|1|RBCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.94120
156ND6|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.85120
164W2I|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
176XHV|1|1BCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.4120
186XQD|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.8120
191VY7|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
204W2H|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
215DOY|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.6120
226UO1|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.95120
236XQE|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION3120
245J8B|1|BCrystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.6120
255HAU|1|1BCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3120
267JQL|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION3120
271VY6|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
284V9R|1|BBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
295HD1|1|1BCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.7120
305HCR|1|1BCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
315HCQ|1|1BCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
324Z8C|1|1BCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.9120
335HCP|1|1BCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.89120
345F8K|1|1BCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
356CFL|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-RAY DIFFRACTION2.6120
366CFK|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-RAY DIFFRACTION2.7120
377MD7|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolutionX-RAY DIFFRACTION2.8120
386XHX|1|1BCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolutionX-RAY DIFFRACTION2.55120
394Y4O|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
405FDV|1|1BCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
415FDU|1|1BCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9121
424WQF|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.8120
434WQY|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.8120
444WQU|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.8120
454WPO|1|ABCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.8120
466O97|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.75120
476OF1|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.8120
486CAE|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
496ND5|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.6120
504W2G|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
511VY5|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
521VY4|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
535WIS|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
545W4K|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
554Y4P|1|1BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
564W2F|1|BBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
575J4C|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
585J4B|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
596CFJ|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
606XHW|1|1BCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.5120
616XHY|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.6120
624Z3S|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.65120
635WIT|1|1BCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
644V8I|1|BBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
654V8I|1|DBCrystal structure of YfiA bound to the 70S ribosome.X-RAY DIFFRACTION2.7120
664V8G|1|BBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
674V8G|1|DBCrystal structure of RMF bound to the 70S ribosome.X-RAY DIFFRACTION3120
685FDU|1|2BCrystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9120
695FDV|1|2BCrystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
704Y4O|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolutionX-RAY DIFFRACTION2.3120
716XHX|1|2BCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with erythromycin and protein Y (YfiA) at 2.55A resolutionX-RAY DIFFRACTION2.55120
727MD7|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with triphenylphosphonium analog of chloramphenicol CAM-C4-TPP and protein Y (YfiA) at 2.80A resolutionX-RAY DIFFRACTION2.8120
736CFK|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolutionX-RAY DIFFRACTION2.7120
746CFL|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolutionX-RAY DIFFRACTION2.6120
755F8K|1|2BCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
765HAU|1|2BCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3120
774WQF|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.8120
784WQY|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.8120
794WPO|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.8120
804V9R|1|DBCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION3120
811VY5|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.55120
824W2G|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.55120
834W2F|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.4120
846XHY|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.6120
856XHW|1|2BCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.5120
864Z3S|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.65120
876UO1|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.95120
886OF1|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.8120
894W2I|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.7120
906XHV|1|2BCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.4120
916XQE|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION3120
926ND6|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.85120
936O97|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.75120
946CAE|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
955J4C|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
965J4B|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
976CFJ|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.8120
985W4K|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
995WIS|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.7120
1004Y4P|1|2BCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.5120
1016ND5|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.6120
1025DOY|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.6120
1036XQD|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.8120
1047JQL|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION3120
1051VY4|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.6120
1065WIT|1|2BCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.6120
1074WQU|1|CBCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.8120
1084Z8C|1|2BCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.9120
1095HCQ|1|2BCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
1105HCR|1|2BCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8120
1115HD1|1|2BCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.7120
1125HCP|1|2BCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.89120
1134W2H|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.7120
1141VY6|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.9120
1151VY7|1|DBCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.8120
1164W2E|1|BCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.9120
1174V7L|1|DBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
1184V7L|1|BBThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION3118
1194V51|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1204V51|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.8119
1214V7Y|1|BBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
1224V7Y|1|DBStructure of the Thermus thermophilus 70S ribosome complexed with azithromycin.X-RAY DIFFRACTION3119
1234V7X|1|BBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
1244V7X|1|DBStructure of the Thermus thermophilus ribosome complexed with erythromycin.X-RAY DIFFRACTION3119
1254V7W|1|BBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
1264V7W|1|DBStructure of the Thermus thermophilus ribosome complexed with chloramphenicol.X-RAY DIFFRACTION3119
1274V8B|1|DBCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION3122
1284V8D|1|DBStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION3122
1295NDK|1|1JCrystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.95122
1304WSD|1|1JComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.95122
1316GSJ|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.96122
1325IB7|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.99122
1335E81|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pairX-RAY DIFFRACTION2.95122
1345IBB|1|1JStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.96122

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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