#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16V3A|1|sN1 (rep)Small subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNAElectron microscopy2.822020-02-05
26V3B|1|sN1Small subunit ribosomal RNA16s Ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty stateElectron microscopy2.912020-02-05
36YT9|1|2Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyElectron microscopy2.72020-09-16
46YPU|1|2Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyElectron microscopy2.92020-09-16
56YS5|1|3Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-amikacin complex - 30S subunit headElectron microscopy32020-09-16
66YTF|1|3Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit headElectron microscopy32020-09-16
76YT9|1|4Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyElectron microscopy2.72020-09-16
86YPU|1|4Small subunit ribosomal RNA16S ribosomal RNAAcinetobacter baumanniiBacteriaRF00177Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyElectron microscopy2.92020-09-16

Release history

Release3.1443.1453.1463.1473.1483.1493.1503.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.178
Date2020-09-162020-09-232020-09-302020-10-072020-10-142020-10-212020-10-282020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-12

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_43481.1NR_3.0_71501.13.144(2) 6V3A|1|sN1, 6V3B|1|sN1(6) 6YPU|1|2, 6YPU|1|4, 6YS5|1|3, 6YT9|1|2, 6YT9|1|4, 6YTF|1|3(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_43481.1NR_3.0_43481.23.179(8) 6V3A|1|sN1, 6V3B|1|sN1, 6YPU|1|2, 6YPU|1|4, 6YS5|1|3, 6YT9|1|2, 6YT9|1|4, 6YTF|1|3(0) (5) 7M4U|1|a, 7M4W|1|a, 7M4X|1|a, 7M4Y|1|a, 7M4Z|1|a

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16YT9|1|2Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyELECTRON MICROSCOPY2.7894
26YPU|1|2Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyELECTRON MICROSCOPY2.9894
36V3B|1|sN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S in Empty stateELECTRON MICROSCOPY2.911519
46V3A|1|sN1Cryo-EM structure of the Acinetobacter baumannii Ribosome: 70S with E-site tRNAELECTRON MICROSCOPY2.821519
56YS5|1|3Acinetobacter baumannii ribosome-amikacin complex - 30S subunit headELECTRON MICROSCOPY3453
66YTF|1|3Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit headELECTRON MICROSCOPY3453
76YPU|1|4Acinetobacter baumannii ribosome-amikacin complex - 30S subunit bodyELECTRON MICROSCOPY2.9146
86YT9|1|4Acinetobacter baumannii ribosome-tigecycline complex - 30S subunit bodyELECTRON MICROSCOPY2.7146

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 0.021 s