#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16SCE|1|B (rep)cyclic oligoadenylatesynthetic constructStructure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylateX-ray diffraction1.832020-02-19
26SCF|1|Icyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
36SCF|1|Kcyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
46SCF|1|Mcyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
56SCF|1|Lcyclic oligoadenylatesynthetic constructA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-ray diffraction1.552019-10-30
66O6X|1|DCyclic RNA cA4synthetic constructCrystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallizationX-ray diffraction2.112019-07-31
74BA2|1|R5'-R(*AP*AP*AP*AP)-3'Saccharolobus solfataricusArchaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphateX-ray diffraction2.52012-10-03
86O6X|1|CCyclic RNA cA4synthetic constructCrystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallizationX-ray diffraction2.112019-07-31
96O7B|1|CCyclic RNA cA4synthetic constructCrystal structure of Csm1-Csm4 cassette in complex with cA4X-ray diffraction2.42019-07-31
106O6V|1|CCyclic RNA cA4synthetic constructCrystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6X-ray diffraction2.352019-07-31
116R9R|1|DDNA (5'-R(P*AP*AP*AP*A)-3')synthetic constructCrystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2X-ray diffraction2.72019-10-02
126OV0|1|ERNA (5'-R(*AP*AP*AP*(A23))-3')synthetic constructCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-ray diffraction2.82019-07-31
136OV0|1|HRNA (5'-R(*AP*AP*AP*(A23))-3')synthetic constructCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-ray diffraction2.82019-07-31
146OV0|1|GRNA (5'-R(*AP*AP*AP*(A23))-3')synthetic constructCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-ray diffraction2.82019-07-31
156O6V|1|DCyclic RNA cA4synthetic constructCrystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6X-ray diffraction2.352019-07-31
166OV0|1|FRNA (5'-R(*AP*AP*AP*(A23))-3')synthetic constructCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-ray diffraction2.82019-07-31
176O7B|1|DCyclic RNA cA4synthetic constructCrystal structure of Csm1-Csm4 cassette in complex with cA4X-ray diffraction2.42019-07-31
186R9R|1|EDNA (5'-R(P*AP*AP*AP*A)-3')synthetic constructCrystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2X-ray diffraction2.72019-10-02
196O7H|1|KCyclic DNA cA4synthetic constructCryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with cA4 in type III-A CRISPR-Cas systemElectron microscopy2.92019-07-31

Release history

Release3.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.1313.1323.1333.1343.1353.1363.1373.1383.139
Date2020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-172020-06-242020-07-012020-07-082020-07-152020-07-222020-07-292020-08-052020-08-12

Parents


Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16O6X|1|CCrystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallizationX-RAY DIFFRACTION2.114
26O6V|1|DCrystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6X-RAY DIFFRACTION2.354
36SCF|1|LA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
46SCF|1|KA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
56SCF|1|MA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
66O7H|1|KCryo-EM structure of Csm-crRNA-target RNA ternary complex in complex with cA4 in type III-A CRISPR-Cas systemELECTRON MICROSCOPY2.94
76O7B|1|DCrystal structure of Csm1-Csm4 cassette in complex with cA4X-RAY DIFFRACTION2.44
86R9R|1|DCrystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2X-RAY DIFFRACTION2.74
96O6X|1|DCrystal structure of Csm6 W14A/E337A mutant in complex with cA4 by cocrystallizationX-RAY DIFFRACTION2.114
106O6V|1|CCrystal structure of Csm6 in complex with cA4 by soaking cA4 into Csm6X-RAY DIFFRACTION2.354
116SCE|1|BStructure of a Type III CRISPR defence DNA nuclease activated by cyclic oligoadenylateX-RAY DIFFRACTION1.834
126SCF|1|IA viral anti-CRISPR subverts type III CRISPR immunity by rapid degradation of cyclic oligoadenylateX-RAY DIFFRACTION1.554
136OV0|1|HCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-RAY DIFFRACTION2.83
146OV0|1|ECrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-RAY DIFFRACTION2.83
156O7B|1|CCrystal structure of Csm1-Csm4 cassette in complex with cA4X-RAY DIFFRACTION2.44
164BA2|1|RArchaeal exosome (Rrp4-Rrp41(D182A)-Rrp42) bound to inorganic phosphateX-RAY DIFFRACTION2.54
176OV0|1|FCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-RAY DIFFRACTION2.82
186R9R|1|ECrystal structure of Csx1 in complex with cyclic oligoadenylate cOA4 conformation 2X-RAY DIFFRACTION2.72
196OV0|1|GCrystal structure of Csm6 in complex with A4>p by soaking A4>p into Csm6X-RAY DIFFRACTION2.82

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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