Equivalence class NR_3.0_65795.25 Obsolete
# | IFE | Standardized name | Molecule | Organism | Source | Rfam | Title | Method | Res. Å | Date |
---|---|---|---|---|---|---|---|---|---|---|
1 | 1FJG|1|A (rep) | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | X-ray diffraction | 3 | 2000-09-25 |
2 | 2UUA|1|A | Small subunit ribosomal RNA | 16S RRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. | X-ray diffraction | 2.9 | 2007-05-15 |
3 | 1N32|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin | X-ray diffraction | 3 | 2002-11-29 |
4 | 4B3M|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the 30S ribosome in complex with compound 1 | X-ray diffraction | 2.9 | 2013-08-07 |
5 | 2UUB|1|A | Small subunit ribosomal RNA | 16S RRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin. | X-ray diffraction | 2.8 | 2007-05-15 |
6 | 2VQE|1|A | Small subunit ribosomal RNA | 16S RRNA | Thermus thermophilus | Bacteria | RF00177 | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding | X-ray diffraction | 2.5 | 2008-04-29 |
7 | 5J8B|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.6 | 2016-05-25 |
8 | 4W2I|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.7 | 2014-10-15 |
9 | 4B3R|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the 30S ribosome in complex with compound 30 | X-ray diffraction | 3 | 2013-08-07 |
10 | 5FDV|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-01-27 |
11 | 4W2I|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.7 | 2014-10-15 |
12 | 5J4C|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2016-04-27 |
13 | 4V9H|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state | X-ray diffraction | 2.86 | 2014-07-09 |
14 | 4Y4O|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution | X-ray diffraction | 2.3 | 2015-03-18 |
15 | 2VQF|1|A | Small subunit ribosomal RNA | 16S RRNA | Thermus thermophilus | Bacteria | RF00177 | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding | X-ray diffraction | 2.9 | 2008-04-29 |
16 | 4Z8C|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-ray diffraction | 2.9 | 2015-05-20 |
17 | 4B3T|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the 30S ribosome in complex with compound 39 | X-ray diffraction | 3 | 2013-08-07 |
18 | 4Y4O|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution | X-ray diffraction | 2.3 | 2015-03-18 |
19 | 5FDU|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.9 | 2016-01-27 |
20 | 1VY4|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-ray diffraction | 2.6 | 2014-08-20 |
21 | 4W2G|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.55 | 2014-10-15 |
22 | 5FDU|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.9 | 2016-01-27 |
23 | 5J4B|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2016-04-27 |
24 | 4W2F|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.4 | 2014-10-15 |
25 | 2UXC|1|A | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit. | X-ray diffraction | 2.9 | 2007-05-08 |
26 | 3T1Y|1|A | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin | X-ray diffraction | 2.8 | 2012-01-25 |
27 | 1VY5|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-ray diffraction | 2.55 | 2014-08-20 |
28 | 4W2E|1|a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.9 | 2014-10-01 |
29 | 4W2F|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.4 | 2014-10-15 |
30 | 4WPO|1|DA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
31 | 5FDV|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-01-27 |
32 | 5F8K|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-02-03 |
33 | 4Z3S|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-ray diffraction | 2.65 | 2015-06-03 |
34 | 1VY5|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-ray diffraction | 2.55 | 2014-08-20 |
35 | 5DOY|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-ray diffraction | 2.6 | 2015-12-30 |
36 | 4W2G|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-ray diffraction | 2.55 | 2014-10-15 |
37 | 4WPO|1|BA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
38 | 4Y4P|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-ray diffraction | 2.5 | 2015-03-18 |
39 | 5DOY|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-ray diffraction | 2.6 | 2015-12-30 |
40 | 1XMQ|1|A | Small subunit ribosomal RNA | 16s ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center | X-ray diffraction | 3 | 2004-12-14 |
41 | 5HAU|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3 | 2016-04-06 |
42 | 4V8I|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of YfiA bound to the 70S ribosome. | X-ray diffraction | 2.7 | 2014-07-09 |
43 | 5J4B|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-ray diffraction | 2.6 | 2016-04-27 |
44 | 4Z8C|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-ray diffraction | 2.9 | 2015-05-20 |
45 | 5HCQ|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
46 | 5HCQ|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
47 | 5VP2|1|1a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2017-06-28 |
48 | 5HAU|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 3 | 2016-04-06 |
49 | 4LNT|1|QA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-ray diffraction | 2.94 | 2014-08-06 |
50 | 5HD1|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.7 | 2016-04-06 |
51 | 4V67|1|AA | Small subunit ribosomal RNA | 16S RRNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
52 | 4Z3S|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-ray diffraction | 2.65 | 2015-06-03 |
53 | 4W2H|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-ray diffraction | 2.7 | 2014-10-15 |
54 | 5F8K|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-02-03 |
55 | 5HCP|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.89 | 2016-04-06 |
56 | 4W2H|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-ray diffraction | 2.7 | 2014-10-15 |
57 | 4V8D|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-ray diffraction | 3 | 2014-07-09 |
58 | 4V67|1|CA | Small subunit ribosomal RNA | 16S RRNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of a translation termination complex formed with release factor RF2. | X-ray diffraction | 3 | 2014-07-09 |
59 | 5J4C|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2016-04-27 |
60 | 4V8I|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of YfiA bound to the 70S ribosome. | X-ray diffraction | 2.7 | 2014-07-09 |
61 | 5HCR|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
62 | 4WQY|1|BA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-ray diffraction | 2.8 | 2015-01-28 |
63 | 4LNT|1|XA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-ray diffraction | 2.94 | 2014-08-06 |
64 | 5HCR|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.8 | 2016-04-06 |
65 | 4V9R|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-ray diffraction | 3 | 2014-07-09 |
66 | 4Y4P|1|2a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-ray diffraction | 2.5 | 2015-03-18 |
67 | 1VY4|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-ray diffraction | 2.6 | 2014-08-20 |
68 | 1VY6|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.9 | 2014-08-20 |
69 | 4WQF|1|BA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
70 | 5HCP|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.89 | 2016-04-06 |
71 | 5HD1|1|1a | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-ray diffraction | 2.7 | 2016-04-06 |
72 | 4V8B|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
73 | 1VY7|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.8 | 2014-08-20 |
74 | 4WQU|1|BA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin | X-ray diffraction | 2.8 | 2015-01-28 |
75 | 4V8D|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-ray diffraction | 3 | 2014-07-09 |
76 | 5VP2|1|2a | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-ray diffraction | 2.8 | 2017-06-28 |
77 | 4V9R|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-ray diffraction | 3 | 2014-07-09 |
78 | 1VY6|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.9 | 2014-08-20 |
79 | 5IBB|1|1G | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-ray diffraction | 2.96 | 2016-05-25 |
80 | 5IB7|1|13 | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
81 | 1VY7|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-ray diffraction | 2.8 | 2014-08-20 |
82 | 4V8B|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-ray diffraction | 3 | 2014-07-09 |
83 | 5IBB|1|13 | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-ray diffraction | 2.96 | 2016-05-25 |
84 | 4WQY|1|DA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-ray diffraction | 2.8 | 2015-01-28 |
85 | 4WQF|1|DA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state | X-ray diffraction | 2.8 | 2015-01-28 |
86 | 4V90|1|AA | Small subunit ribosomal RNA | 16S RIBOSOMAL RNA | Thermus thermophilus | Bacteria | RF00177 | Thermus thermophilus Ribosome | X-ray diffraction | 2.95 | 2014-07-09 |
87 | 5E81|1|13 | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-ray diffraction | 2.95 | 2016-01-27 |
88 | 4V51|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-ray diffraction | 2.8 | 2014-07-09 |
89 | 4WQU|1|DA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin | X-ray diffraction | 2.8 | 2015-01-28 |
90 | 5E81|1|1G | Small subunit ribosomal RNA | 16S ribosomal RNA, mRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-ray diffraction | 2.95 | 2016-01-27 |
91 | 4V51|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-ray diffraction | 2.8 | 2014-07-09 |
92 | 4WSD|1|13 | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 2.95 | 2015-06-10 |
93 | 4WSD|1|1G | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-ray diffraction | 2.95 | 2015-06-10 |
94 | 4V8G|1|CA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of RMF bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
95 | 4V7W|1|AA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus ribosome complexed with chloramphenicol. | X-ray diffraction | 3 | 2014-07-09 |
96 | 4V7W|1|CA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus ribosome complexed with chloramphenicol. | X-ray diffraction | 3 | 2014-07-09 |
97 | 5IB7|1|1G | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-ray diffraction | 2.99 | 2016-05-25 |
98 | 4V7X|1|AA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus ribosome complexed with erythromycin. | X-ray diffraction | 3 | 2014-07-09 |
99 | 4V7X|1|CA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus ribosome complexed with erythromycin. | X-ray diffraction | 3 | 2014-07-09 |
100 | 4V7Y|1|CA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin. | X-ray diffraction | 3 | 2014-07-09 |
101 | 4V7Y|1|AA | Small subunit ribosomal RNA | 16S rRNA | Thermus thermophilus | Bacteria | RF00177 | Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin. | X-ray diffraction | 3 | 2014-07-09 |
102 | 4V8G|1|AA | Small subunit ribosomal RNA | 16S Ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | Crystal structure of RMF bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
103 | 4V7L|1|CA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
104 | 4V7L|1|AA | Small subunit ribosomal RNA | 16S ribosomal RNA | Thermus thermophilus | Bacteria | RF00177 | The structures of viomycin bound to the 70S ribosome. | X-ray diffraction | 3 | 2014-07-09 |
Release history
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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.
#S | View | PDB | Title | Method | Resolution | Length |
---|---|---|---|---|---|---|
1 | 1XMQ|1|A | Crystal Structure of t6A37-ASLLysUUU AAA-mRNA Bound to the Decoding Center | X-RAY DIFFRACTION | 3 | 1507 | |
2 | 2UXC|1|A | Crystal structure of an extended tRNA anticodon stem loop in complex with its cognate mRNA UCGU in the context of the Thermus thermophilus 30S subunit. | X-RAY DIFFRACTION | 2.9 | 1513 | |
3 | 1FJG|1|A | STRUCTURE OF THE THERMUS THERMOPHILUS 30S RIBOSOMAL SUBUNIT IN COMPLEX WITH THE ANTIBIOTICS STREPTOMYCIN, SPECTINOMYCIN, AND PAROMOMYCIN | X-RAY DIFFRACTION | 3 | 1507 | |
4 | 2VQF|1|A | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding | X-RAY DIFFRACTION | 2.9 | 1513 | |
5 | 2VQE|1|A | Modified uridines with C5-methylene substituents at the first position of the tRNA anticodon stabilize U-G wobble pairing during decoding | X-RAY DIFFRACTION | 2.5 | 1513 | |
6 | 2UUA|1|A | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUC-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 2.9 | 1512 | |
7 | 2UUB|1|A | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a Valine-ASL with cmo5U in position 34 bound to an mRNA with a GUU-codon in the A-site and paromomycin. | X-RAY DIFFRACTION | 2.8 | 1512 | |
8 | 4B3T|1|A | Crystal structure of the 30S ribosome in complex with compound 39 | X-RAY DIFFRACTION | 3 | 1512 | |
9 | 4B3M|1|A | Crystal structure of the 30S ribosome in complex with compound 1 | X-RAY DIFFRACTION | 2.9 | 1512 | |
10 | 4B3R|1|A | Crystal structure of the 30S ribosome in complex with compound 30 | X-RAY DIFFRACTION | 3 | 1512 | |
11 | 1N32|1|A | Structure of the Thermus thermophilus 30S ribosomal subunit bound to codon and near-cognate transfer RNA anticodon stem-loop mismatched at the first codon position at the a site with paromomycin | X-RAY DIFFRACTION | 3 | 1513 | |
12 | 3T1Y|1|A | Structure of the Thermus thermophilus 30S ribosomal subunit complexed with a human anti-codon stem loop (HASL) of transfer RNA Lysine 3 (TRNALYS3) bound to an mRNA with an AAG-codon in the A-site and paromomycin | X-RAY DIFFRACTION | 2.8 | 1513 | |
13 | 4W2E|1|a | Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.9 | 1496 | |
14 | 5J8B|1|a | Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.6 | 1498 | |
15 | 4W2I|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-RAY DIFFRACTION | 2.7 | 1503 | |
16 | 4WPO|1|DA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-RAY DIFFRACTION | 2.8 | 1503 | |
17 | 4W2G|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-RAY DIFFRACTION | 2.55 | 1503 | |
18 | 4W2F|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-RAY DIFFRACTION | 2.4 | 1503 | |
19 | 4Y4P|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-RAY DIFFRACTION | 2.5 | 1491 | |
20 | 5VP2|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-RAY DIFFRACTION | 2.8 | 1491 | |
21 | 5J4B|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-RAY DIFFRACTION | 2.6 | 1491 | |
22 | 5J4C|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-RAY DIFFRACTION | 2.8 | 1491 | |
23 | 4Z3S|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-RAY DIFFRACTION | 2.65 | 1491 | |
24 | 5DOY|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-RAY DIFFRACTION | 2.6 | 1491 | |
25 | 1VY7|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-RAY DIFFRACTION | 2.8 | 1503 | |
26 | 4W2H|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-RAY DIFFRACTION | 2.7 | 1503 | |
27 | 1VY4|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-RAY DIFFRACTION | 2.6 | 1503 | |
28 | 1VY5|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-RAY DIFFRACTION | 2.55 | 1503 | |
29 | 1VY6|1|CA | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-RAY DIFFRACTION | 2.9 | 1503 | |
30 | 5HD1|1|2a | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.7 | 1483 | |
31 | 5HCP|1|2a | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.89 | 1483 | |
32 | 5HCR|1|2a | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1483 | |
33 | 5HCQ|1|2a | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1483 | |
34 | 4Z8C|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-RAY DIFFRACTION | 2.9 | 1483 | |
35 | 4V9R|1|CA | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-RAY DIFFRACTION | 3 | 1503 | |
36 | 5HAU|1|2a | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 3 | 1501 | |
37 | 4WQF|1|DA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state | X-RAY DIFFRACTION | 2.8 | 1501 | |
38 | 4WQY|1|DA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-RAY DIFFRACTION | 2.8 | 1501 | |
39 | 4WQU|1|DA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin | X-RAY DIFFRACTION | 2.8 | 1501 | |
40 | 5F8K|1|2a | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1492 | |
41 | 4Y4O|1|2a | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution | X-RAY DIFFRACTION | 2.3 | 1492 | |
42 | 5FDV|1|2a | Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1492 | |
43 | 5FDU|1|2a | Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.9 | 1492 | |
44 | 4WQU|1|BA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin | X-RAY DIFFRACTION | 2.8 | 1495 | |
45 | 4WQF|1|BA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state | X-RAY DIFFRACTION | 2.8 | 1495 | |
46 | 4WQY|1|BA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid) | X-RAY DIFFRACTION | 2.8 | 1495 | |
47 | 5HAU|1|1a | Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 3 | 1495 | |
48 | 4WPO|1|BA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state | X-RAY DIFFRACTION | 2.8 | 1497 | |
49 | 4Z8C|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin | X-RAY DIFFRACTION | 2.9 | 1477 | |
50 | 5HD1|1|1a | Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.7 | 1477 | |
51 | 5HCP|1|1a | Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.89 | 1477 | |
52 | 5HCR|1|1a | Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1477 | |
53 | 5HCQ|1|1a | Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1477 | |
54 | 4V9R|1|AA | Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome | X-RAY DIFFRACTION | 3 | 1498 | |
55 | 1VY7|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-RAY DIFFRACTION | 2.8 | 1498 | |
56 | 4W2I|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites | X-RAY DIFFRACTION | 2.7 | 1496 | |
57 | 4W2H|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site | X-RAY DIFFRACTION | 2.7 | 1497 | |
58 | 1VY6|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site. | X-RAY DIFFRACTION | 2.9 | 1498 | |
59 | 1VY4|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites. | X-RAY DIFFRACTION | 2.6 | 1497 | |
60 | 1VY5|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site. | X-RAY DIFFRACTION | 2.55 | 1498 | |
61 | 4W2G|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites | X-RAY DIFFRACTION | 2.55 | 1498 | |
62 | 4W2F|1|AA | Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites | X-RAY DIFFRACTION | 2.4 | 1497 | |
63 | 5DOY|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution | X-RAY DIFFRACTION | 2.6 | 1488 | |
64 | 4Z3S|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution | X-RAY DIFFRACTION | 2.65 | 1488 | |
65 | 4Y4P|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution | X-RAY DIFFRACTION | 2.5 | 1488 | |
66 | 5VP2|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-RAY DIFFRACTION | 2.8 | 1488 | |
67 | 5J4C|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution | X-RAY DIFFRACTION | 2.8 | 1488 | |
68 | 5J4B|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution | X-RAY DIFFRACTION | 2.6 | 1488 | |
69 | 5F8K|1|1a | Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1488 | |
70 | 5FDV|1|1a | Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.8 | 1488 | |
71 | 5FDU|1|1a | Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome | X-RAY DIFFRACTION | 2.9 | 1488 | |
72 | 4Y4O|1|1a | Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution | X-RAY DIFFRACTION | 2.3 | 1488 | |
73 | 4V8I|1|AA | Crystal structure of YfiA bound to the 70S ribosome. | X-RAY DIFFRACTION | 2.7 | 1493 | |
74 | 5IB7|1|13 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-RAY DIFFRACTION | 2.99 | 1499 | |
75 | 5IBB|1|13 | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-RAY DIFFRACTION | 2.96 | 1496 | |
76 | 5E81|1|13 | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 1496 | |
77 | 4WSD|1|13 | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-RAY DIFFRACTION | 2.95 | 1498 | |
78 | 4V8D|1|AA | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-RAY DIFFRACTION | 3 | 1502 | |
79 | 4V8B|1|AA | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-RAY DIFFRACTION | 3 | 1506 | |
80 | 4LNT|1|XA | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-RAY DIFFRACTION | 2.94 | 1500 | |
81 | 4LNT|1|QA | Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome | X-RAY DIFFRACTION | 2.94 | 1500 | |
82 | 4V8D|1|CA | Structure analysis of ribosomal decoding (cognate tRNA-tyr complex). | X-RAY DIFFRACTION | 3 | 1502 | |
83 | 4V8B|1|CA | Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex). | X-RAY DIFFRACTION | 3 | 1506 | |
84 | 4WSD|1|1G | Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin. | X-RAY DIFFRACTION | 2.95 | 1498 | |
85 | 5IB7|1|1G | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin | X-RAY DIFFRACTION | 2.99 | 1508 | |
86 | 5E81|1|1G | Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair | X-RAY DIFFRACTION | 2.95 | 1506 | |
87 | 5IBB|1|1G | Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site | X-RAY DIFFRACTION | 2.96 | 1506 | |
88 | 4V7L|1|CA | The structures of viomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 1495 | |
89 | 4V7L|1|AA | The structures of viomycin bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 1495 | |
90 | 4V51|1|CA | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-RAY DIFFRACTION | 2.8 | 1504 | |
91 | 4V51|1|AA | Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin | X-RAY DIFFRACTION | 2.8 | 1504 | |
92 | 4V7X|1|AA | Structure of the Thermus thermophilus ribosome complexed with erythromycin. | X-RAY DIFFRACTION | 3 | 1504 | |
93 | 4V7W|1|AA | Structure of the Thermus thermophilus ribosome complexed with chloramphenicol. | X-RAY DIFFRACTION | 3 | 1504 | |
94 | 4V7Y|1|AA | Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin. | X-RAY DIFFRACTION | 3 | 1504 | |
95 | 4V7Y|1|CA | Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin. | X-RAY DIFFRACTION | 3 | 1504 | |
96 | 4V7X|1|CA | Structure of the Thermus thermophilus ribosome complexed with erythromycin. | X-RAY DIFFRACTION | 3 | 1504 | |
97 | 4V7W|1|CA | Structure of the Thermus thermophilus ribosome complexed with chloramphenicol. | X-RAY DIFFRACTION | 3 | 1504 | |
98 | 4V67|1|CA | Crystal structure of a translation termination complex formed with release factor RF2. | X-RAY DIFFRACTION | 3 | 1504 | |
99 | 4V67|1|AA | Crystal structure of a translation termination complex formed with release factor RF2. | X-RAY DIFFRACTION | 3 | 1504 | |
100 | 4V8G|1|CA | Crystal structure of RMF bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 1501 | |
101 | 4V8I|1|CA | Crystal structure of YfiA bound to the 70S ribosome. | X-RAY DIFFRACTION | 2.7 | 1491 | |
102 | 4V9H|1|AA | Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state | X-RAY DIFFRACTION | 2.86 | 1514 | |
103 | 4V90|1|AA | Thermus thermophilus Ribosome | X-RAY DIFFRACTION | 2.95 | 1507 | |
104 | 4V8G|1|AA | Crystal structure of RMF bound to the 70S ribosome. | X-RAY DIFFRACTION | 3 | 1505 |
Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.
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