#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18QBL|1|b (rep)Retron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with inactive effector (E106A, 2 segments)Electron microscopy2.662024-06-05
27XJG|1|H+ 7XJG|1|IRNA (14-MER), RNA (81-MER)Escherichia coliCryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.5 angstromElectron microscopy2.512022-09-14
37XJG|1|E+ 7XJG|1|FRNA (14-MER), RNA (81-MER)Escherichia coliCryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.5 angstromElectron microscopy2.512022-09-14
48QBL|1|CRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with inactive effector (E106A, 2 segments)Electron microscopy2.662024-06-05
58QBL|1|RRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with inactive effector (E106A, 2 segments)Electron microscopy2.662024-06-05
68QBL|1|WRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with inactive effector (E106A, 2 segments)Electron microscopy2.662024-06-05
78QBL|1|MRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with inactive effector (E106A, 2 segments)Electron microscopy2.662024-06-05
87V9X|1|H+ 7V9X|1|IRNA (14-MER), RNA (81-MER)Escherichia coliCryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstromElectron microscopy2.822022-08-31
97V9X|1|E+ 7V9X|1|FRNA (14-MER), RNA (81-MER)Escherichia coliCryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstromElectron microscopy2.822022-08-31
108QBK|1|WRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)Electron microscopy2.992024-06-05
118QBL|1|ORetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with inactive effector (E106A, 2 segments)Electron microscopy2.662024-06-05
128QBK|1|CRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)Electron microscopy2.992024-06-05
138QBK|1|MRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)Electron microscopy2.992024-06-05
148QBK|1|RRetron-Eco1-A2, Retron-Eco1-msrEscherichia coli BL21(DE3)Retron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)Electron microscopy2.992024-06-05

Release history

Release3.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.3623.3633.3643.365
Date2024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-202024-11-272024-12-042024-12-11

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18QBL|1|bRetron-Eco1 filament with inactive effector (E106A, 2 segments)ELECTRON MICROSCOPY2.6661
28QBK|1|RRetron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)ELECTRON MICROSCOPY2.9961
38QBK|1|WRetron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)ELECTRON MICROSCOPY2.9961
48QBL|1|RRetron-Eco1 filament with inactive effector (E106A, 2 segments)ELECTRON MICROSCOPY2.6661
58QBL|1|WRetron-Eco1 filament with inactive effector (E106A, 2 segments)ELECTRON MICROSCOPY2.6661
68QBL|1|MRetron-Eco1 filament with inactive effector (E106A, 2 segments)ELECTRON MICROSCOPY2.6658
78QBL|1|CRetron-Eco1 filament with inactive effector (E106A, 2 segments)ELECTRON MICROSCOPY2.6661
88QBK|1|CRetron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)ELECTRON MICROSCOPY2.9961
98QBK|1|MRetron-Eco1 filament with ADP-ribosylated Effector (local map with 1 segment)ELECTRON MICROSCOPY2.9961
108QBL|1|ORetron-Eco1 filament with inactive effector (E106A, 2 segments)ELECTRON MICROSCOPY2.6661
117XJG|1|E+ 7XJG|1|FCryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.5 angstromELECTRON MICROSCOPY2.5158
127V9X|1|E+ 7V9X|1|FCryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstromELECTRON MICROSCOPY2.8258
137V9X|1|H+ 7V9X|1|ICryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.8 angstromELECTRON MICROSCOPY2.8258
147XJG|1|H+ 7XJG|1|ICryo-EM structure of E.coli retron-Ec86 in complex with its effector at 2.5 angstromELECTRON MICROSCOPY2.5158

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.069 s