#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16N6C|1|D (rep)RNA (5'-R(P*AP*A)-3')synthetic constructVibrio cholerae Oligoribonuclease bound to pAAX-ray diffraction1.622019-06-12
26N6J|1|CRNA (5'-R(P*AP*A)-3')synthetic constructHuman REXO2 bound to pAAX-ray diffraction1.322019-06-12
36N6J|1|DRNA (5'-R(P*AP*A)-3')synthetic constructHuman REXO2 bound to pAAX-ray diffraction1.322019-06-12
46P7Q|1|ERNA (5'-R(P*AP*A)-3')Escherichia coliStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-ray diffraction1.662019-12-25
56P7Q|1|FRNA (5'-R(P*AP*A)-3')Escherichia coliStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-ray diffraction1.662019-12-25
66P7Q|1|DRNA (5'-R(P*AP*A)-3')Escherichia coliStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-ray diffraction1.662019-12-25
76RCL|1|CRNA (5'-R(P*AP*A)-3')synthetic constructCrystal structure of REXO2-D199A-AAX-ray diffraction1.972019-10-09
85JJU|1|CRNA (5'-R(P*AP*A)-3')synthetic constructCrystal structure of Rv2837c complexed with 5'-pApA and 5'-AMPX-ray diffraction2.312016-05-04
94EJT|1|G5'-R(*AP*A)-3'Staphylococcus epidermidis TcaR in complex with RNAX-ray diffraction32013-06-05

Release history

Release3.1513.1523.1533.1543.1553.1563.1573.1583.1593.1603.1613.1623.1633.1643.1653.1663.1673.1683.1693.1703.1713.1723.1733.1743.1753.1763.1773.1783.1793.1803.1813.1823.1833.1843.1853.1863.1873.1883.1893.1903.1913.1923.1933.1943.195
Date2020-11-042020-11-112020-11-182020-11-252020-12-022020-12-092020-12-162020-12-232020-12-302021-01-062021-01-132021-01-202021-01-272021-02-032021-02-102021-02-172021-02-242021-03-032021-03-102021-03-172021-03-242021-03-312021-04-072021-04-142021-04-212021-04-282021-05-052021-05-122021-05-192021-05-262021-06-022021-06-092021-06-162021-06-232021-06-302021-07-072021-07-142021-07-212021-07-282021-08-042021-08-112021-08-182021-08-252021-09-012021-09-08

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_80570.10NR_3.0_80570.93.151(9) 4EJT|1|G, 5JJU|1|C, 6N6C|1|D, 6N6J|1|C, 6N6J|1|D, 6P7Q|1|D, 6P7Q|1|E, 6P7Q|1|F, 6RCL|1|C(0) (2) 5CEU|1|C, 5CEU|1|D

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_80570.10NR_3.0_53003.13.196(9) 4EJT|1|G, 5JJU|1|C, 6N6C|1|D, 6N6J|1|C, 6N6J|1|D, 6P7Q|1|D, 6P7Q|1|E, 6P7Q|1|F, 6RCL|1|C(0) (8) 7MPM|1|B, 7MPM|1|D, 7MPM|1|F, 7MPM|1|H, 7MPM|1|J, 7MPM|1|L, 7MPM|1|N, 7MPM|1|P

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16P7Q|1|FStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662
26P7Q|1|EStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662
36N6C|1|DVibrio cholerae Oligoribonuclease bound to pAAX-RAY DIFFRACTION1.622
46N6J|1|DHuman REXO2 bound to pAAX-RAY DIFFRACTION1.323
56RCL|1|CCrystal structure of REXO2-D199A-AAX-RAY DIFFRACTION1.972
66P7Q|1|DStructure of E. coli MS115-1 NucC, 5'-pApA bound formX-RAY DIFFRACTION1.662
75JJU|1|CCrystal structure of Rv2837c complexed with 5'-pApA and 5'-AMPX-RAY DIFFRACTION2.312
86N6J|1|CHuman REXO2 bound to pAAX-RAY DIFFRACTION1.323
94EJT|1|GStaphylococcus epidermidis TcaR in complex with RNAX-RAY DIFFRACTION32

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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