#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16N6D|1|D (rep)RNA (5'-R(P*AP*G)-3')synthetic constructVibrio cholerae Oligoribonuclease bound to pAGX-ray diffraction1.532019-06-12
26N6K|1|CRNA (5'-R(P*AP*G)-3')synthetic constructHuman REXO2 bound to pAGX-ray diffraction1.422019-06-12
36N6K|1|DRNA (5'-R(P*AP*G)-3')synthetic constructHuman REXO2 bound to pAGX-ray diffraction1.422019-06-12
47MW8|1|JpApGsynthetic constructCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-ray diffraction1.92022-05-18
57MW8|1|KpApGsynthetic constructCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-ray diffraction1.92022-05-18
67MW8|1|LpApGsynthetic constructCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-ray diffraction1.92022-05-18
77MW8|1|MpApGsynthetic constructCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-ray diffraction1.92022-05-18
87MW8|1|NpApGsynthetic constructCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-ray diffraction1.92022-05-18
97MW8|1|OpApGsynthetic constructCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-ray diffraction1.92022-05-18
103RTJ|1|DRNA (5'-R(*AP*G)-3')Crystal structure of ricin bound with dinucleotide ApGX-ray diffraction32011-08-31
116TY9|1|MTranscriptCypovirus 1In situ structure of BmCPV RNA dependent RNA polymerase at initiation stateElectron microscopy2.92019-11-20

Release history

Release3.2313.2323.2333.2343.2353.2363.2373.2383.2393.2403.2413.2423.2433.2443.2453.2463.2473.2483.2493.2503.2513.2523.2533.2543.2553.2563.2573.2583.2593.2603.2613.2623.2633.2643.2653.2663.2673.2683.2693.2703.2713.2723.2733.2743.2753.2763.2773.2783.2793.2803.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.3323.3333.3343.3353.3363.3373.3383.3393.3403.3413.3423.3433.3443.3453.3463.3473.3483.3493.3503.3513.3523.3533.3543.3553.3563.3573.3583.3593.3603.3613.362
Date2022-05-182022-05-252022-06-012022-06-082022-06-152022-06-222022-06-292022-07-062022-07-132022-07-202022-07-272022-08-032022-08-102022-08-172022-08-242022-08-312022-09-072022-09-142022-09-212022-09-282022-10-052022-10-122022-10-192022-10-262022-11-022022-11-092022-11-162022-11-232022-11-302022-12-072022-12-142022-12-212022-12-282023-01-042023-01-112023-01-182023-01-252023-02-012023-02-082023-02-152023-02-222023-03-012023-03-082023-03-152023-03-222023-03-292023-04-052023-04-122023-04-192023-04-262023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-242024-05-012024-05-082024-05-152024-05-222024-05-292024-06-052024-06-122024-06-192024-06-262024-07-032024-07-102024-07-172024-07-252024-07-312024-08-072024-08-142024-08-212024-08-282024-09-042024-09-112024-09-182024-09-252024-10-022024-10-092024-10-162024-10-232024-10-302024-11-062024-11-132024-11-20

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_81965.1NR_3.0_94833.33.231(5) 3RTJ|1|D, 6N6D|1|D, 6N6K|1|C, 6N6K|1|D, 6TY9|1|M(6) 7MW8|1|J, 7MW8|1|K, 7MW8|1|L, 7MW8|1|M, 7MW8|1|N, 7MW8|1|O(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17MW8|1|LCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-RAY DIFFRACTION1.91
27MW8|1|KCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-RAY DIFFRACTION1.91
36N6D|1|DVibrio cholerae Oligoribonuclease bound to pAGX-RAY DIFFRACTION1.532
47MW8|1|NCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-RAY DIFFRACTION1.91
57MW8|1|JCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-RAY DIFFRACTION1.92
67MW8|1|OCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-RAY DIFFRACTION1.91
76N6K|1|CHuman REXO2 bound to pAGX-RAY DIFFRACTION1.423
87MW8|1|MCrystal Structure Analysis of Xac Nucleotide Pyrophosphatase/PhosphodiesteraseX-RAY DIFFRACTION1.91
93RTJ|1|DCrystal structure of ricin bound with dinucleotide ApGX-RAY DIFFRACTION32
106N6K|1|DHuman REXO2 bound to pAGX-RAY DIFFRACTION1.423
116TY9|1|MIn situ structure of BmCPV RNA dependent RNA polymerase at initiation stateELECTRON MICROSCOPY2.91

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2024 BGSU RNA group. Page generated in 2.5813 s