#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
17QI4|1|AA (rep)Small subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome at 2.2 A resolutionElectron microscopy2.212022-07-13
27P2E|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycinElectron microscopy2.42022-07-27
36ZM6|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAElectron microscopy2.592021-01-13
47PNX|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation aElectron microscopy2.762022-06-15
58CSS|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial small subunit assembly intermediate (State D)Electron microscopy2.362022-12-14
66ZM5|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideElectron microscopy2.892021-01-13
77QI6|1|AASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolutionElectron microscopy2.982023-05-17
86VMI|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)Electron microscopy2.962020-08-05
97PO3|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial ribosome small subunitElectron microscopy2.922022-06-15
107PO1|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Initiation complex of human mitochondrial ribosome small subunit with IF3Electron microscopy2.922022-06-15
117PO0|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Assembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3Electron microscopy2.92022-06-15
126VLZ|1|AASmall subunit ribosomal RNA12s rRNAHomo sapiensMitochondriaRF00177Structure of the human mitochondrial ribosome-EF-G1 complex (ClassI)Electron microscopy2.972020-08-05
136RW4|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Structure of human mitochondrial 28S ribosome in complex with mitochondrial IF3Electron microscopy2.972020-06-03
148CSR|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial small subunit assembly intermediate (State C)Electron microscopy2.542022-12-14
158CST|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial small subunit assembly intermediate (State E)Electron microscopy2.852022-12-14
168CSQ|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial small subunit assembly intermediate (State B)Electron microscopy2.542022-12-14
178CSP|1|ASmall subunit ribosomal RNA12S mitochondrial rRNAHomo sapiensMitochondriaRF00177Human mitochondrial small subunit assembly intermediate (State A)Electron microscopy2.662022-12-14

Release history

Release3.2833.2843.2853.286
Date2023-05-172023-05-242023-05-312023-06-07

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.0_93855.13NR_3.0_93855.123.283(16) 6RW4|1|A, 6VLZ|1|AA, 6VMI|1|AA, 6ZM5|1|AA, 6ZM6|1|AA, 7P2E|1|A, 7PNX|1|A, 7PO0|1|A, 7PO1|1|A, 7PO3|1|A, 7QI4|1|AA, 8CSP|1|A, 8CSQ|1|A, 8CSR|1|A, 8CSS|1|A, 8CST|1|A(1) 7QI6|1|AA(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.0_93855.13NR_3.0_93855.143.287(17) 6RW4|1|A, 6VLZ|1|AA, 6VMI|1|AA, 6ZM5|1|AA, 6ZM6|1|AA, 7P2E|1|A, 7PNX|1|A, 7PO0|1|A, 7PO1|1|A, 7PO3|1|A, 7QI4|1|AA, 7QI6|1|AA, 8CSP|1|A, 8CSQ|1|A, 8CSR|1|A, 8CSS|1|A, 8CST|1|A(0) (1) 8OIS|1|AA

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16VLZ|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassI)ELECTRON MICROSCOPY2.97944
26VMI|1|AAStructure of the human mitochondrial ribosome-EF-G1 complex (ClassIII)ELECTRON MICROSCOPY2.96944
36ZM5|1|AAHuman mitochondrial ribosome in complex with OXA1L, mRNA, A/A tRNA, P/P tRNA and nascent polypeptideELECTRON MICROSCOPY2.89954
46ZM6|1|AAHuman mitochondrial ribosome in complex with mRNA, A/A tRNA and P/P tRNAELECTRON MICROSCOPY2.59954
57QI4|1|AAHuman mitochondrial ribosome at 2.2 A resolutionELECTRON MICROSCOPY2.21949
67QI6|1|AAHuman mitochondrial ribosome in complex with mRNA, A/P- and P/E-tRNAs at 2.98 A resolutionELECTRON MICROSCOPY2.98949
77PO3|1|AHuman mitochondrial ribosome small subunitELECTRON MICROSCOPY2.92950
87PO1|1|AInitiation complex of human mitochondrial ribosome small subunit with IF3ELECTRON MICROSCOPY2.92950
97P2E|1|AHuman mitochondrial ribosome small subunit in complex with IF3, GMPPMP and streptomycinELECTRON MICROSCOPY2.4959
106RW4|1|AStructure of human mitochondrial 28S ribosome in complex with mitochondrial IF3ELECTRON MICROSCOPY2.97950
117PO0|1|AAssembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and IF3ELECTRON MICROSCOPY2.9946
127PNX|1|AAssembly intermediate of human mitochondrial ribosome small subunit without mS37 in complex with RBFA and METTL15 conformation aELECTRON MICROSCOPY2.76946
138CST|1|AHuman mitochondrial small subunit assembly intermediate (State E)ELECTRON MICROSCOPY2.85886
148CSS|1|AHuman mitochondrial small subunit assembly intermediate (State D)ELECTRON MICROSCOPY2.36844
158CSR|1|AHuman mitochondrial small subunit assembly intermediate (State C)ELECTRON MICROSCOPY2.54853
168CSQ|1|AHuman mitochondrial small subunit assembly intermediate (State B)ELECTRON MICROSCOPY2.54802
178CSP|1|AHuman mitochondrial small subunit assembly intermediate (State A)ELECTRON MICROSCOPY2.66737

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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