NR_3.0_97519.48

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	Date
1	4Y4O\|1\|2A (rep)	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	2015-03-18
2	4Y4O\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-ray diffraction	2.3	2015-03-18
3	5HCQ\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
4	4V9H\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-ray diffraction	2.86	2014-07-09
5	5FDU\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2016-01-27
6	5FDV\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-01-27
7	5HCQ\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
8	4V8I\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2014-07-09
9	5FDV\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-01-27
10	5FDU\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2016-01-27
11	4WPO\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
12	5IBB\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
13	5IB7\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
14	5E81\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-ray diffraction	2.95	2016-01-27
15	6CAE\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-04-18
16	4V8I\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of YfiA bound to the 70S ribosome.	X-ray diffraction	2.7	2014-07-09
17	6CFL\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-ray diffraction	2.6	2018-03-07
18	5IBB\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-ray diffraction	2.96	2016-05-25
19	6CFL\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-ray diffraction	2.6	2018-03-07
20	6CAE\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-04-18
21	5E81\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-ray diffraction	2.95	2016-01-27
22	5IB7\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-ray diffraction	2.99	2016-05-25
23	5HCR\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
24	6CFK\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-ray diffraction	2.7	2018-03-07
25	4WPO\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-ray diffraction	2.8	2015-01-28
26	4Z8C\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
27	5NDK\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	2017-12-13
28	4WSD\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
29	6CFJ\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2018-03-07
30	5W4K\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2017-08-30
31	6CFK\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-ray diffraction	2.7	2018-03-07
32	5HCR\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-04-06
33	4WQU\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	2015-01-28
34	5J4B\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
35	4V8D\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
36	1VY4\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
37	6OF1\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	2019-04-17
38	5J4B\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2016-04-27
39	4WSD\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-ray diffraction	2.95	2015-06-10
40	5NDK\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-ray diffraction	2.95	2017-12-13
41	5J8B\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.6	2016-05-25
42	4V9R\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
43	5HD1\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
44	5WIS\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2018-02-14
45	1VY4\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-ray diffraction	2.6	2014-08-20
46	5J4C\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
47	4LNT\|1\|YA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
48	4Z8C\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-ray diffraction	2.9	2015-05-20
49	4WQF\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	2015-01-28
50	5J4C\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2016-04-27
51	4V9R\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-ray diffraction	3	2014-07-09
52	4W2G\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
53	5HCP\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
54	4W2H\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
55	4V8D\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-ray diffraction	3	2014-07-09
56	5HD1\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.7	2016-04-06
57	5HCP\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.89	2016-04-06
58	4W2G\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.55	2014-10-15
59	4V8G\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
60	4V8B\|1\|BA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
61	5W4K\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2017-08-30
62	6OF1\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-ray diffraction	2.8	2019-04-17
63	4V8G\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of RMF bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
64	6CFJ\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-ray diffraction	2.8	2018-03-07
65	4Z3S\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
66	4W2H\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-ray diffraction	2.7	2014-10-15
67	4Z3S\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-ray diffraction	2.65	2015-06-03
68	4W2I\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
69	6ND5\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	2019-03-20
70	4W2I\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.7	2014-10-15
71	5HAU\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
72	5HAU\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	3	2016-04-06
73	4LNT\|1\|RA	Large subunit ribosomal RNA	23S rRNA, tRNA acceptor end mimic	Thermus thermophilus	Bacteria	RF02541	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-ray diffraction	2.94	2014-08-06
74	5WIS\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-ray diffraction	2.7	2018-02-14
75	4W2F\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
76	6ND5\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-ray diffraction	2.6	2019-03-20
77	4WQU\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-ray diffraction	2.8	2015-01-28
78	4W2F\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-ray diffraction	2.4	2014-10-15
79	4WQF\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-ray diffraction	2.8	2015-01-28
80	4V8B\|1\|DA	Large subunit ribosomal RNA	RNA (2912-MER)	Thermus thermophilus	Bacteria	RF02541	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-ray diffraction	3	2014-07-09
81	6O97\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	2019-04-17
82	1VY7\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
83	4Y4P\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
84	4WQY\|1\|AA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
85	4Y4P\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-ray diffraction	2.5	2015-03-18
86	1VY5\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
87	5WIT\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-02-14
88	1VY7\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.8	2014-08-20
89	1VY5\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-ray diffraction	2.55	2014-08-20
90	5DOY\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
91	5DOY\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-ray diffraction	2.6	2015-12-30
92	6O97\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-ray diffraction	2.75	2019-04-17
93	5WIT\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-ray diffraction	2.6	2018-02-14
94	1VY6\|1\|DA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
95	6ND6\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	2019-02-20
96	1VY6\|1\|BA	Large subunit ribosomal RNA	23S Ribosomal RNA, Cytidine-Puromycin	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-ray diffraction	2.9	2014-08-20
97	4WQY\|1\|CA	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-ray diffraction	2.8	2015-01-28
98	4V90\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Thermus thermophilus Ribosome	X-ray diffraction	2.95	2014-07-09
99	6ND6\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-ray diffraction	2.85	2019-02-20
100	4V51\|1\|BA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
101	6UO1\|1\|1A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	2019-11-27
102	4V51\|1\|DA	Large subunit ribosomal RNA	23S RIBOSOMAL RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-ray diffraction	2.8	2014-07-09
103	5F8K\|1\|1A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
104	6UO1\|1\|2A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-ray diffraction	2.95	2019-11-27
105	4W2E\|1\|A	Large subunit ribosomal RNA	23S Ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.9	2014-10-01
106	4V7Y\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2014-07-09
107	4V7Y\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-ray diffraction	3	2014-07-09
108	5F8K\|1\|2A	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-ray diffraction	2.8	2016-02-03
109	4V7L\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
110	4V7X\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2014-07-09
111	4V7X\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-ray diffraction	3	2014-07-09
112	4V67\|1\|BA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
113	4V7L\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	The structures of viomycin bound to the 70S ribosome.	X-ray diffraction	3	2014-07-09
114	4V7W\|1\|BA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2014-07-09
115	4V7W\|1\|DA	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-ray diffraction	3	2014-07-09
116	4V67\|1\|DA	Large subunit ribosomal RNA	23S RRNA	Thermus thermophilus	Bacteria	RF02541	Crystal structure of a translation termination complex formed with release factor RF2.	X-ray diffraction	3	2014-07-09
117	6GSJ\|1\|1H	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	2018-07-04
118	6GSJ\|1\|14	Large subunit ribosomal RNA	23S ribosomal RNA	Thermus thermophilus	Bacteria	RF02541	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-ray diffraction	2.96	2018-07-04

Release history

Release	3.132	3.133	3.134	3.135	3.136	3.137
Date	2020-06-24	2020-07-01	2020-07-08	2020-07-15	2020-07-22	2020-07-29

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.0_97519.48	NR_3.0_97519.47	3.132	(118) 1VY4\|1\|BA, 1VY4\|1\|DA, 1VY5\|1\|BA, 1VY5\|1\|DA, 1VY6\|1\|BA, 1VY6\|1\|DA, 1VY7\|1\|BA, 1VY7\|1\|DA, 4LNT\|1\|RA, 4LNT\|1\|YA, 4V51\|1\|BA, 4V51\|1\|DA, 4V67\|1\|BA, 4V67\|1\|DA, 4V7L\|1\|BA, 4V7L\|1\|DA, 4V7W\|1\|BA, 4V7W\|1\|DA, 4V7X\|1\|BA, 4V7X\|1\|DA, 4V7Y\|1\|BA, 4V7Y\|1\|DA, 4V8B\|1\|BA, 4V8B\|1\|DA, 4V8D\|1\|BA, 4V8D\|1\|DA, 4V8G\|1\|BA, 4V8G\|1\|DA, 4V8I\|1\|BA, 4V8I\|1\|DA, 4V90\|1\|BA, 4V9H\|1\|BA, 4V9R\|1\|BA, 4V9R\|1\|DA, 4W2E\|1\|A, 4W2F\|1\|BA, 4W2F\|1\|DA, 4W2G\|1\|BA, 4W2G\|1\|DA, 4W2H\|1\|BA, 4W2H\|1\|DA, 4W2I\|1\|BA, 4W2I\|1\|DA, 4WPO\|1\|AA, 4WPO\|1\|CA, 4WQF\|1\|AA, 4WQF\|1\|CA, 4WQU\|1\|AA, 4WQU\|1\|CA, 4WQY\|1\|AA, 4WQY\|1\|CA, 4WSD\|1\|14, 4WSD\|1\|1H, 4Y4O\|1\|1A, 4Y4O\|1\|2A, 4Y4P\|1\|1A, 4Y4P\|1\|2A, 4Z3S\|1\|1A, 4Z3S\|1\|2A, 4Z8C\|1\|1A, 4Z8C\|1\|2A, 5DOY\|1\|1A, 5DOY\|1\|2A, 5E81\|1\|14, 5E81\|1\|1H, 5F8K\|1\|1A, 5F8K\|1\|2A, 5FDU\|1\|1A, 5FDU\|1\|2A, 5FDV\|1\|1A, 5FDV\|1\|2A, 5HAU\|1\|1A, 5HAU\|1\|2A, 5HCP\|1\|1A, 5HCP\|1\|2A, 5HCQ\|1\|1A, 5HCQ\|1\|2A, 5HCR\|1\|1A, 5HCR\|1\|2A, 5HD1\|1\|1A, 5HD1\|1\|2A, 5IB7\|1\|14, 5IB7\|1\|1H, 5IBB\|1\|14, 5IBB\|1\|1H, 5J4B\|1\|1A, 5J4B\|1\|2A, 5J4C\|1\|1A, 5J4C\|1\|2A, 5J8B\|1\|A, 5NDK\|1\|14, 5NDK\|1\|1H, 5W4K\|1\|1A, 5W4K\|1\|2A, 5WIS\|1\|1A, 5WIS\|1\|2A, 5WIT\|1\|1A, 5WIT\|1\|2A, 6CAE\|1\|1A, 6CAE\|1\|2A, 6CFJ\|1\|1A, 6CFJ\|1\|2A, 6CFK\|1\|1A, 6CFK\|1\|2A, 6CFL\|1\|1A, 6CFL\|1\|2A, 6GSJ\|1\|14, 6GSJ\|1\|1H, 6ND5\|1\|1A, 6ND5\|1\|2A, 6ND6\|1\|1A, 6ND6\|1\|2A, 6O97\|1\|1A, 6O97\|1\|2A, 6OF1\|1\|1A, 6OF1\|1\|2A, 6UO1\|1\|1A, 6UO1\|1\|2A	(0)	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.0_97519.48	NR_3.0_97519.49	3.138	(118) 1VY4\|1\|BA, 1VY4\|1\|DA, 1VY5\|1\|BA, 1VY5\|1\|DA, 1VY6\|1\|BA, 1VY6\|1\|DA, 1VY7\|1\|BA, 1VY7\|1\|DA, 4LNT\|1\|RA, 4LNT\|1\|YA, 4V51\|1\|BA, 4V51\|1\|DA, 4V67\|1\|BA, 4V67\|1\|DA, 4V7L\|1\|BA, 4V7L\|1\|DA, 4V7W\|1\|BA, 4V7W\|1\|DA, 4V7X\|1\|BA, 4V7X\|1\|DA, 4V7Y\|1\|BA, 4V7Y\|1\|DA, 4V8B\|1\|BA, 4V8B\|1\|DA, 4V8D\|1\|BA, 4V8D\|1\|DA, 4V8G\|1\|BA, 4V8G\|1\|DA, 4V8I\|1\|BA, 4V8I\|1\|DA, 4V90\|1\|BA, 4V9H\|1\|BA, 4V9R\|1\|BA, 4V9R\|1\|DA, 4W2E\|1\|A, 4W2F\|1\|BA, 4W2F\|1\|DA, 4W2G\|1\|BA, 4W2G\|1\|DA, 4W2H\|1\|BA, 4W2H\|1\|DA, 4W2I\|1\|BA, 4W2I\|1\|DA, 4WPO\|1\|AA, 4WPO\|1\|CA, 4WQF\|1\|AA, 4WQF\|1\|CA, 4WQU\|1\|AA, 4WQU\|1\|CA, 4WQY\|1\|AA, 4WQY\|1\|CA, 4WSD\|1\|14, 4WSD\|1\|1H, 4Y4O\|1\|1A, 4Y4O\|1\|2A, 4Y4P\|1\|1A, 4Y4P\|1\|2A, 4Z3S\|1\|1A, 4Z3S\|1\|2A, 4Z8C\|1\|1A, 4Z8C\|1\|2A, 5DOY\|1\|1A, 5DOY\|1\|2A, 5E81\|1\|14, 5E81\|1\|1H, 5F8K\|1\|1A, 5F8K\|1\|2A, 5FDU\|1\|1A, 5FDU\|1\|2A, 5FDV\|1\|1A, 5FDV\|1\|2A, 5HAU\|1\|1A, 5HAU\|1\|2A, 5HCP\|1\|1A, 5HCP\|1\|2A, 5HCQ\|1\|1A, 5HCQ\|1\|2A, 5HCR\|1\|1A, 5HCR\|1\|2A, 5HD1\|1\|1A, 5HD1\|1\|2A, 5IB7\|1\|14, 5IB7\|1\|1H, 5IBB\|1\|14, 5IBB\|1\|1H, 5J4B\|1\|1A, 5J4B\|1\|2A, 5J4C\|1\|1A, 5J4C\|1\|2A, 5J8B\|1\|A, 5NDK\|1\|14, 5NDK\|1\|1H, 5W4K\|1\|1A, 5W4K\|1\|2A, 5WIS\|1\|1A, 5WIS\|1\|2A, 5WIT\|1\|1A, 5WIT\|1\|2A, 6CAE\|1\|1A, 6CAE\|1\|2A, 6CFJ\|1\|1A, 6CFJ\|1\|2A, 6CFK\|1\|1A, 6CFK\|1\|2A, 6CFL\|1\|1A, 6CFL\|1\|2A, 6GSJ\|1\|14, 6GSJ\|1\|1H, 6ND5\|1\|1A, 6ND5\|1\|2A, 6ND6\|1\|1A, 6ND6\|1\|2A, 6O97\|1\|1A, 6O97\|1\|2A, 6OF1\|1\|1A, 6OF1\|1\|2A, 6UO1\|1\|1A, 6UO1\|1\|2A	(0)	(4) 6XQD\|1\|1A, 6XQD\|1\|2A, 6XQE\|1\|1A, 6XQE\|1\|2A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	Length
1	4V9H\|1\|BA	Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase state	X-RAY DIFFRACTION	2.86	2859
2	4V90\|1\|BA	Thermus thermophilus Ribosome	X-RAY DIFFRACTION	2.95	2901
3	4V7W\|1\|DA	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	2725
4	4V7W\|1\|BA	Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.	X-RAY DIFFRACTION	3	2725
5	4V7X\|1\|DA	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	2725
6	4V7X\|1\|BA	Structure of the Thermus thermophilus ribosome complexed with erythromycin.	X-RAY DIFFRACTION	3	2725
7	4V7Y\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	2725
8	4V7Y\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.	X-RAY DIFFRACTION	3	2725
9	4V51\|1\|DA	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	2772
10	4V51\|1\|BA	Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycin	X-RAY DIFFRACTION	2.8	2772
11	4V7L\|1\|BA	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2800
12	4V7L\|1\|DA	The structures of viomycin bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2800
13	4V67\|1\|BA	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	2879
14	4V67\|1\|DA	Crystal structure of a translation termination complex formed with release factor RF2.	X-RAY DIFFRACTION	3	2879
15	4W2E\|1\|A	Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2873
16	4V9R\|1\|DA	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	2714
17	5WIT\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
18	4Z3S\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	2789
19	4WPO\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	2868
20	4W2F\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	2800
21	4W2G\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	2800
22	1VY4\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	2800
23	1VY5\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	2800
24	1VY6\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	2800
25	4Y4P\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	2789
26	5WIS\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2789
27	5W4K\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2789
28	5J4C\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2789
29	5J4B\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
30	6CFJ\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2789
31	6ND6\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	2789
32	6O97\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	2789
33	6CAE\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
34	6OF1\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	2789
35	6ND5\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	2789
36	6UO1\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	2789
37	5DOY\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	2789
38	4W2H\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	2800
39	4W2I\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	2800
40	1VY7\|1\|DA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	2800
41	4WQF\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	2848
42	4WQY\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	2848
43	4WQU\|1\|CA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	2868
44	5HAU\|1\|2A	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	2868
45	5HCP\|1\|2A	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	2790
46	5HD1\|1\|2A	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	2790
47	5HCR\|1\|2A	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2790
48	5HCQ\|1\|2A	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2790
49	4Z8C\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	2790
50	5F8K\|1\|2A	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2856
51	5FDV\|1\|2A	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2857
52	5FDU\|1\|2A	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2857
53	4Y4O\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	2856
54	6CFK\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-RAY DIFFRACTION	2.7	2856
55	6CFL\|1\|2A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-RAY DIFFRACTION	2.6	2856
56	4V8I\|1\|DA	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	2798
57	4V8I\|1\|BA	Crystal structure of YfiA bound to the 70S ribosome.	X-RAY DIFFRACTION	2.7	2827
58	4V8G\|1\|DA	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2814
59	4V8G\|1\|BA	Crystal structure of RMF bound to the 70S ribosome.	X-RAY DIFFRACTION	3	2809
60	6CFK\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with D-histidyl-CAM and bound to protein Y (YfiA) at 2.7A resolution	X-RAY DIFFRACTION	2.7	2861
61	6CFL\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with lysyl-CAM and bound to protein Y (YfiA) at 2.6A resolution	X-RAY DIFFRACTION	2.6	2861
62	4Y4O\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to protein Y (YfiA) at 2.3A resolution	X-RAY DIFFRACTION	2.3	2861
63	5FDU\|1\|1A	Crystal structure of the Metalnikowin I antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.9	2861
64	5FDV\|1\|1A	Crystal structure of the Pyrrhocoricin antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2861
65	5F8K\|1\|1A	Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2861
66	4Z8C\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocin	X-RAY DIFFRACTION	2.9	2746
67	5HCQ\|1\|1A	Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2746
68	5HCR\|1\|1A	Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.8	2746
69	5HCP\|1\|1A	Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.89	2746
70	5HD1\|1\|1A	Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.7	2746
71	4WQY\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)	X-RAY DIFFRACTION	2.8	2852
72	4WQF\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state	X-RAY DIFFRACTION	2.8	2852
73	5HAU\|1\|1A	Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	3	2872
74	4WQU\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin	X-RAY DIFFRACTION	2.8	2872
75	4WPO\|1\|AA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state	X-RAY DIFFRACTION	2.8	2872
76	4W2H\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P site	X-RAY DIFFRACTION	2.7	2822
77	4V9R\|1\|BA	Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosome	X-RAY DIFFRACTION	3	2731
78	1VY6\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.9	2819
79	1VY5\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.	X-RAY DIFFRACTION	2.55	2819
80	1VY4\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.	X-RAY DIFFRACTION	2.6	2819
81	4W2G\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.55	2819
82	4W2F\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.4	2871
83	5WIT\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2860
84	5J4B\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2861
85	5J4C\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2860
86	6CFJ\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolution	X-RAY DIFFRACTION	2.8	2860
87	4Y4P\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolution	X-RAY DIFFRACTION	2.5	2860
88	5WIS\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2860
89	5W4K\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolution	X-RAY DIFFRACTION	2.7	2860
90	4Z3S\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolution	X-RAY DIFFRACTION	2.65	2860
91	5DOY\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolution	X-RAY DIFFRACTION	2.6	2860
92	6ND5\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolution	X-RAY DIFFRACTION	2.6	2860
93	6ND6\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolution	X-RAY DIFFRACTION	2.85	2860
94	6O97\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolution	X-RAY DIFFRACTION	2.75	2860
95	6CAE\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolution	X-RAY DIFFRACTION	2.6	2860
96	6OF1\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolution	X-RAY DIFFRACTION	2.8	2860
97	6UO1\|1\|1A	Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolution	X-RAY DIFFRACTION	2.95	2860
98	1VY7\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.	X-RAY DIFFRACTION	2.8	2819
99	4W2I\|1\|BA	Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sites	X-RAY DIFFRACTION	2.7	2822
100	4LNT\|1\|YA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	2883
101	4V8B\|1\|BA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	2912
102	4V8D\|1\|BA	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	2912
103	4WSD\|1\|1H	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	2912
104	5NDK\|1\|1H	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	2912
105	5E81\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-RAY DIFFRACTION	2.95	2888
106	6GSJ\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	2850
107	5IBB\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	2841
108	5IB7\|1\|1H	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	2860
109	4LNT\|1\|RA	Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the Ribosome	X-RAY DIFFRACTION	2.94	2882
110	4V8B\|1\|DA	Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).	X-RAY DIFFRACTION	3	2907
111	4V8D\|1\|DA	Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).	X-RAY DIFFRACTION	3	2907
112	4WSD\|1\|14	Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.	X-RAY DIFFRACTION	2.95	2909
113	5NDK\|1\|14	Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA	X-RAY DIFFRACTION	2.95	2909
114	6GSJ\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-site	X-RAY DIFFRACTION	2.96	2811
115	5IB7\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycin	X-RAY DIFFRACTION	2.99	2826
116	5IBB\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-site	X-RAY DIFFRACTION	2.96	2810
117	5E81\|1\|14	Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with wobble pair	X-RAY DIFFRACTION	2.95	2855
118	5J8B\|1\|A	Crystal structure of Elongation Factor 4 (EF-4/LepA) in complex with GDPCP bound to the Thermus thermophilus 70S ribosome	X-RAY DIFFRACTION	2.6	2874

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.0_97519.48 Obsolete

Release history

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