NR_3.5_03510.26

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#	IFE	Standardized name	Molecule	Organism	Source	Rfam	Title	Method	Res. Å	#NTs	Date
1	4V88\|1\|A6 (rep)	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	1795	2014-07-09
2	5TBW\|1\|sR	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	1783	2017-07-26
3	4V88\|1\|A2	Small subunit ribosomal RNA	18S RIBOSOMAL RNA	Saccharomyces cerevisiae	Eukarya	RF01960	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-ray diffraction	3	1781	2014-07-09
4	5TBW\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-ray diffraction	3	1781	2017-07-26
5	6HHQ\|1\|sR	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	1783	2019-02-20
6	5OBM\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	1739	2017-12-13
7	5I4L\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	1795	2016-06-22
8	5MEI\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	1783	2017-06-28
9	5LYB\|1\|6	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	1795	2016-11-23
10	5I4L\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-ray diffraction	3.1	1781	2016-06-22
11	5MEI\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Agelastatin A bound to the 80S ribosome	X-ray diffraction	3.5	1781	2017-06-28
12	5OBM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-ray diffraction	3.4	1712	2017-12-13
13	5ON6\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	1783	2018-02-28
14	6HHQ\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-ray diffraction	3.1	1781	2019-02-20
15	5LYB\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-ray diffraction	3.25	1781	2016-11-23
16	5ON6\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of haemanthamine bound to the 80S ribosome	X-ray diffraction	3.1	1781	2018-02-28
17	5NDV\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	1683	2017-12-13
18	5NDV\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-ray diffraction	3.3	1712	2017-12-13
19	5TGM\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	1795	2017-01-18
20	5TGM\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.5	1781	2017-01-18
21	5DAT\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	1795	2016-08-31
22	5TGA\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	1795	2016-11-23
23	5DGE\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	1795	2017-01-25
24	5DGV\|1\|6	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	1795	2016-12-14
25	5DGF\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	1795	2016-12-14
26	5DC3\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	1795	2016-06-01
27	5DAT\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-ray diffraction	3.15	1781	2016-08-31
28	5TGA\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-ray diffraction	3.3	1781	2016-11-23
29	5DGV\|1\|2	Small subunit ribosomal RNA	Saccharomyces cerevisiae S288c RDN37-1 miscRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.1	1781	2016-12-14
30	5DGE\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-ray diffraction	3.45	1781	2017-01-25
31	5DGF\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-ray diffraction	3.3	1781	2016-12-14
32	5DC3\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Complex of yeast 80S ribosome with non-modified eIF5A	X-ray diffraction	3.25	1781	2016-06-01
33	4U4R\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	1795	2014-10-22
34	4U3U\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	1795	2014-10-22
35	4U4R\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-ray diffraction	2.8	1750	2014-10-22
36	4U3U\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-ray diffraction	2.9	1750	2014-10-22
37	4U3M\|1\|6	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	1795	2014-10-22
38	4U4Q\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	1795	2014-10-22
39	4U4U\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	1795	2014-10-22
40	4U52\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	1795	2014-10-22
41	4U3M\|1\|2	Small subunit ribosomal RNA	18S rRNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-ray diffraction	3	1750	2014-10-22
42	4U6F\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	1795	2014-10-22
43	4U4N\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	1795	2014-10-22
44	4U52\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-ray diffraction	3	1750	2014-10-22
45	4U4U\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-ray diffraction	3	1750	2014-10-22
46	4U4Q\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-ray diffraction	3	1750	2014-10-22
47	6Q8Y\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	Electron microscopy	3.1	1767	2019-03-13
48	4U4Z\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	1795	2014-10-22
49	4U6F\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-ray diffraction	3.1	1781	2014-10-22
50	4U4Y\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	1795	2014-10-22
51	4U3N\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	1795	2014-10-22
52	4U55\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	1795	2014-10-22
53	5M1J\|1\|22	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Nonstop ribosomal complex bound with Dom34 and Hbs1	Electron microscopy	3.3	1781	2017-01-18
54	4U4Z\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-ray diffraction	3.1	1750	2014-10-22
55	4U4N\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Edeine bound to the yeast 80S ribosome	X-ray diffraction	3.1	1750	2014-10-22
56	4U50\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	1795	2014-10-22
57	4U51\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	1795	2014-10-22
58	4U3N\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-ray diffraction	3.2	1750	2014-10-22
59	4U4Y\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-ray diffraction	3.2	1750	2014-10-22
60	4U51\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-ray diffraction	3.2	1750	2014-10-22
61	4U55\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-ray diffraction	3.2	1750	2014-10-22
62	6S47\|1\|BA	Small subunit ribosomal RNA	18S rRNA (1707-MER)	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	Electron microscopy	3.28	1707	2019-07-24
63	6FAI\|1\|2	Small subunit ribosomal RNA	20S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	Electron microscopy	3.4	1775	2018-02-28
64	4U53\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	1795	2014-10-22
65	5JUP\|1\|A	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	Electron microscopy	3.5	1781	2016-10-05
66	4U50\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-ray diffraction	3.2	1750	2014-10-22
67	6RBD\|1\|2	Small subunit ribosomal RNA	20S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	Electron microscopy	3.47	1777	2019-06-26
68	4U53\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-ray diffraction	3.3	1750	2014-10-22
69	4U56\|1\|6	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	1795	2014-10-22
70	4U56\|1\|2	Small subunit ribosomal RNA	18S ribosomal RNA	Saccharomyces cerevisiae	Eukarya	RF01960	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-ray diffraction	3.45	1750	2014-10-22

Release history

Release	3.99	3.100	3.101	3.102	3.103	3.104	3.105
Date	2019-11-06	2019-11-13	2019-11-20	2019-11-27	2019-12-04	2019-12-11	2019-12-18

Parents

This class	Parent classes	Release id	Intersection	Added to this class	Only in parent
NR_3.5_03510.26	NR_3.5_03510.25	3.99	(70) 4U3M\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U4R\|1\|2, 4U4R\|1\|6, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V88\|1\|A2, 4V88\|1\|A6, 5DAT\|1\|2, 5DAT\|1\|6, 5DC3\|1\|2, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUP\|1\|A, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MEI\|1\|6, 5MEI\|1\|A, 5NDV\|1\|2, 5NDV\|1\|6, 5OBM\|1\|2, 5OBM\|1\|6, 5ON6\|1\|6, 5ON6\|1\|A, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 6FAI\|1\|2, 6HHQ\|1\|A, 6HHQ\|1\|sR, 6Q8Y\|1\|2, 6RBD\|1\|2, 6S47\|1\|BA	(0)	(0)

Children

This class	Descendant classes	Release id	Intersection	Only in this class	Added to child
NR_3.5_03510.26	NR_3.5_03510.27	3.106	(70) 4U3M\|1\|2, 4U3M\|1\|6, 4U3N\|1\|2, 4U3N\|1\|6, 4U3U\|1\|2, 4U3U\|1\|6, 4U4N\|1\|2, 4U4N\|1\|6, 4U4Q\|1\|2, 4U4Q\|1\|6, 4U4R\|1\|2, 4U4R\|1\|6, 4U4U\|1\|2, 4U4U\|1\|6, 4U4Y\|1\|2, 4U4Y\|1\|6, 4U4Z\|1\|2, 4U4Z\|1\|6, 4U50\|1\|2, 4U50\|1\|6, 4U51\|1\|2, 4U51\|1\|6, 4U52\|1\|2, 4U52\|1\|6, 4U53\|1\|2, 4U53\|1\|6, 4U55\|1\|2, 4U55\|1\|6, 4U56\|1\|2, 4U56\|1\|6, 4U6F\|1\|2, 4U6F\|1\|6, 4V88\|1\|A2, 4V88\|1\|A6, 5DAT\|1\|2, 5DAT\|1\|6, 5DC3\|1\|2, 5DC3\|1\|6, 5DGE\|1\|2, 5DGE\|1\|6, 5DGF\|1\|2, 5DGF\|1\|6, 5DGV\|1\|2, 5DGV\|1\|6, 5I4L\|1\|2, 5I4L\|1\|6, 5JUP\|1\|A, 5LYB\|1\|2, 5LYB\|1\|6, 5M1J\|1\|22, 5MEI\|1\|6, 5MEI\|1\|A, 5NDV\|1\|2, 5NDV\|1\|6, 5OBM\|1\|2, 5OBM\|1\|6, 5ON6\|1\|6, 5ON6\|1\|A, 5TBW\|1\|A, 5TBW\|1\|sR, 5TGA\|1\|2, 5TGA\|1\|6, 5TGM\|1\|2, 5TGM\|1\|6, 6FAI\|1\|2, 6HHQ\|1\|A, 6HHQ\|1\|sR, 6Q8Y\|1\|2, 6RBD\|1\|2, 6S47\|1\|BA	(0)	(3) 6T4Q\|1\|C2, 6T7I\|1\|C2, 6T7T\|1\|C2

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#S	PDB	Title	Method	Resolution	#NTs
1	5JUP\|1\|A	Saccharomyces cerevisiae 80S ribosome bound with elongation factor eEF2-GDP-sordarin and Taura Syndrome Virus IRES, Structure II (mid-rotated 40S subunit)	ELECTRON MICROSCOPY	3.5	1781
2	5NDV\|1\|2	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1712
3	5DGF\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1781
4	5DAT\|1\|2	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1781
5	5TGM\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1781
6	4U56\|1\|2	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1750
7	5ON6\|1\|A	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1781
8	5MEI\|1\|A	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1781
9	6HHQ\|1\|A	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
10	4U52\|1\|2	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
11	4U55\|1\|2	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
12	4U51\|1\|2	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
13	4U53\|1\|2	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1750
14	4U50\|1\|2	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
15	4U4Q\|1\|2	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
16	4U4U\|1\|2	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
17	4U4N\|1\|2	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
18	5I4L\|1\|2	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
19	4U3N\|1\|2	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
20	4U4Z\|1\|2	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1750
21	5TGA\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1781
22	5LYB\|1\|2	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1781
23	4V88\|1\|A2	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1781
24	4U6F\|1\|2	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1781
25	4U4R\|1\|2	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1750
26	4U3U\|1\|2	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1750
27	4U3M\|1\|2	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1750
28	4U4Y\|1\|2	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1750
29	5TBW\|1\|A	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1781
30	5DGV\|1\|2	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1781
31	5DC3\|1\|2	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1781
32	5DGE\|1\|2	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1781
33	5OBM\|1\|2	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1712
34	5NDV\|1\|6	Crystal structure of Paromomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1683
35	5OBM\|1\|6	Crystal structure of Gentamicin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.4	1739
36	5DAT\|1\|6	Complex of yeast 80S ribosome with hypusine-containing eIF5A	X-RAY DIFFRACTION	3.15	1795
37	5DGF\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.3	1795
38	5DC3\|1\|6	Complex of yeast 80S ribosome with non-modified eIF5A	X-RAY DIFFRACTION	3.25	1795
39	5DGE\|1\|6	Coping with proline stalling: structural basis of hypusine-induced protein synthesis by the eukaryotic ribosome	X-RAY DIFFRACTION	3.45	1795
40	5DGV\|1\|6	Complex of yeast 80S ribosome with hypusine-containing/non-modified eIF5A and/or a peptidyl-tRNA analog	X-RAY DIFFRACTION	3.1	1795
41	5TGM\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.5	1795
42	4U50\|1\|6	Crystal structure of Verrucarin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
43	4U53\|1\|6	Crystal structure of Deoxynivalenol bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.3	1795
44	4U55\|1\|6	Crystal structure of Cryptopleurine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
45	4U51\|1\|6	Crystal structure of Narciclasine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
46	4U4Q\|1\|6	Crystal structure of Homoharringtonine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
47	4U4U\|1\|6	Crystal structure of Lycorine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
48	4U4N\|1\|6	Crystal structure of Edeine bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
49	5I4L\|1\|6	Crystal structure of Amicoumacin A bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
50	4U4Z\|1\|6	Crystal structure of Phyllanthoside bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
51	4U3N\|1\|6	Crystal structure of CCA trinucleotide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
52	4U6F\|1\|6	Crystal structure of T-2 toxin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1795
53	5TGA\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCA-Pro	X-RAY DIFFRACTION	3.3	1795
54	5LYB\|1\|6	Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn	X-RAY DIFFRACTION	3.25	1795
55	4V88\|1\|A6	The structure of the eukaryotic ribosome at 3.0 A resolution.	X-RAY DIFFRACTION	3	1795
56	4U3U\|1\|6	Crystal structure of Cycloheximide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.9	1795
57	4U4R\|1\|6	Crystal structure of Lactimidomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	2.8	1795
58	4U3M\|1\|6	Crystal structure of Anisomycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
59	4U4Y\|1\|6	Crystal structure of Pactamycin bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.2	1795
60	5TBW\|1\|sR	Crystal structure of chlorolissoclimide bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1783
61	6HHQ\|1\|sR	Crystal structure of compound C45 bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.1	1783
62	5MEI\|1\|6	Crystal structure of Agelastatin A bound to the 80S ribosome	X-RAY DIFFRACTION	3.5	1783
63	5ON6\|1\|6	Crystal structure of haemanthamine bound to the 80S ribosome	X-RAY DIFFRACTION	3.1	1783
64	4U52\|1\|6	Crystal structure of Nagilactone C bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3	1795
65	4U56\|1\|6	Crystal structure of Blasticidin S bound to the yeast 80S ribosome	X-RAY DIFFRACTION	3.45	1795
66	6S47\|1\|BA	Saccharomyces cerevisiae 80S ribosome bound with ABCF protein New1	ELECTRON MICROSCOPY	3.28	1707
67	5M1J\|1\|22	Nonstop ribosomal complex bound with Dom34 and Hbs1	ELECTRON MICROSCOPY	3.3	1781
68	6Q8Y\|1\|2	Cryo-EM structure of the mRNA translating and degrading yeast 80S ribosome-Xrn1 nuclease complex	ELECTRON MICROSCOPY	3.1	1767
69	6FAI\|1\|2	Structure of a eukaryotic cytoplasmic pre-40S ribosomal subunit	ELECTRON MICROSCOPY	3.4	1775
70	6RBD\|1\|2	State 1 of yeast Tsr1-TAP Rps20-Deltaloop pre-40S particles	ELECTRON MICROSCOPY	3.47	1777

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.

Coloring options: Nucleotide numbers

Equivalence class NR_3.5_03510.26 Obsolete

Release history

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