#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16N6E|1|D (rep)RNA (5'-R(P*GP*A)-3')synthetic constructVibrio cholerae Oligoribonuclease bound to pGAX-ray diffraction1.582019-06-12
24G7O|1|I5'-R(*GP*A)-3'Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-ray diffraction2.992012-10-31
34G7O|1|S5'-R(*GP*A)-3'Crystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-ray diffraction2.992012-10-31
45X22|1|SRNA (5'-R(*GP*A)-3')Thermus thermophilusCrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-ray diffraction3.352017-07-05
55X22|1|IRNA (5'-R(*GP*A)-3')Thermus thermophilusCrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-ray diffraction3.352017-07-05
65X21|1|IRNA (5'-R(*GP*A)-3')Thermus thermophilusCrystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)X-ray diffraction3.322017-07-05

Release history

Release3.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.116
Date2019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-04

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_04288.2NR_3.5_04288.13.78(5) 4G7O|1|I, 4G7O|1|S, 5X21|1|I, 5X22|1|I, 5X22|1|S(1) 6N6E|1|D(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_04288.2NR_3.5_04288.33.117(6) 4G7O|1|I, 4G7O|1|S, 5X21|1|I, 5X22|1|I, 5X22|1|S, 6N6E|1|D(0) (1) 6L74|1|I

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14G7O|1|ICrystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-RAY DIFFRACTION2.992
26N6E|1|DVibrio cholerae Oligoribonuclease bound to pGAX-RAY DIFFRACTION1.582
34G7O|1|SCrystal structure of Thermus thermophilus transcription initiation complex containing 2 nt of RNAX-RAY DIFFRACTION2.992
45X22|1|SCrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-RAY DIFFRACTION3.352
55X22|1|ICrystal structure of Thermus thermophilus transcription initiation complex with GpA and CMPcPPX-RAY DIFFRACTION3.352
65X21|1|ICrystal structure of Thermus thermophilus transcription initiation complex with GpA and pseudouridimycin (PUM)X-RAY DIFFRACTION3.322

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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