#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|DB (rep)5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
25JC9|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
35J8A|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
44YBB|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
56I7V|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
64WOI|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
75IT8|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
85J91|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
94U27|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
105J88|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
114WF1|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
124WOI|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
134V9D|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
144V9P|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
154V9P|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
164U24|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
174V9O|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
184WWW|1|RB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
194U26|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
204V9P|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
214V7T|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
224V9O|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
234V6C|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
244U25|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
254V9O|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
264V9P|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
274U1U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
286LKQ|1|u5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.12020-05-06
294V7U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
304U20|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
314V7V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
324V9C|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
334U1V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
344V52|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
355J7L|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
364V52|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
374V7S|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
385J8A|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
394V9D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
404V50|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
415JC9|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
424V85|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
436I7V|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
444V57|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
454V64|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
464V64|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
474V57|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
484V54|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
494V54|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
504V9O|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
514U27|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
524WF1|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
535J88|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
544U25|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
554V4Q|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
564U1V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
574V50|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
584V4Q|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
594YBB|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
604U26|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
614U1U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
624V9C|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
634V7T|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
644U20|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
655IT8|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
664U24|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
674WWW|1|YB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
685J91|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
694V6C|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
704V7V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
714V7S|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
724V7U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
735J5B|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
744V4H|1|BA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
754V4H|1|DA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
765J5B|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
777K00|1|b5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
786XZ7|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.12020-07-22
797LVK|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cfr-modified 50S subunit from Escherichia coliElectron microscopy2.22021-12-15
806PJ6|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High resolution cryo-EM structure of E.coli 50SElectron microscopy2.22020-01-22
817N1P|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
827PJS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.352021-10-20
837O1A|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.42021-09-01
847S1H|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.352021-11-17
857S1K|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.422022-01-19
867BL4|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.42021-05-12
877N2U|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.532021-07-14
887N2V|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.542021-07-14
897S1G|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
906XZB|1|B25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.542020-11-04
916YSS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.62020-08-19
926PC6|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 47Electron microscopy2.52020-06-17
936PCR|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40oElectron microscopy2.52020-06-17
946PC7|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 46Electron microscopy2.52020-06-17
956YS3|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideElectron microscopy2.582020-09-30
967O1C|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanElectron microscopy2.62021-09-01
977N30|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.662021-07-14
987NWT|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.662021-12-15
997N31|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.692021-07-14
1006TBV|1|05S15S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.72020-01-01
1016TC3|1|05S15S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.72020-01-01
1026XZA|1|B25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.662020-11-04
1037N2C|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.722021-07-14
1046PCQ|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to VM2Electron microscopy2.62020-06-17
1056PC5|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compounds 46 and VS1Electron microscopy2.72020-06-17
1066QDW|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideElectron microscopy2.832020-01-15
1077NSO|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.92021-07-14
1087ST2|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.92022-02-23
1095AFI|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000012.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1107OT5|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-70 cotranslational folding intermediate 1Electron microscopy2.92022-01-19
1117B5K|1|B5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.92021-05-26
1126Y69|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.862020-07-01
1137O19|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanElectron microscopy2.92021-09-01
1146ORE|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release complex 70SElectron microscopy2.92019-06-19
1157OIZ|1|bSmall subunit ribosomal RNA fragment16S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptideElectron microscopy2.92021-09-15
1167P3K|1|b5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)Electron microscopy2.92021-10-27
1176PCT|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 41qElectron microscopy2.82020-06-17
1186WYV|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compounds 47 and VS1Electron microscopy2.752020-06-17
1196U48|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.872019-09-18
1205NWY|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF000012.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
1215MDV|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
1226ZTP|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32020-09-16
1236ZU1|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32020-09-16
1246ZTO|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32020-09-23
1257OII|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-70 cotranslational folding intermediate 2Electron microscopy32022-01-19
1267OIF|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 2Electron microscopy32022-01-19
1277ST6|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
1286WDE|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
1296PCS|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40eElectron microscopy2.82020-06-17
1305H5U|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
1316WD0|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy32020-07-01
1326HRM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S d2d8 stapled ribosomeElectron microscopy2.962018-12-19
1336PC8|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40qElectron microscopy2.92020-06-17
1346H4N|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
1357NWW|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 1Electron microscopy3.052022-01-19
1366QUL|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy32019-04-10
1377AC7|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.082021-08-18
1386SZS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.062019-12-04
1396PCH|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 21Electron microscopy2.92020-06-17
1405WFS|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1417NSQ|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.12021-07-14
1427PJV|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.12021-10-20
1435MDZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
1446S0K|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosome nascent chain in complex with SecAElectron microscopy3.12019-10-09
1456YSR|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 stalled ribosome complexElectron microscopy3.12020-08-19
1466X7K|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.12020-09-02
1477PJY|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.12021-10-20
1486OM6|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.12021-02-10
1496ENU|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.12017-11-22
1505MDW|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
1515MGP|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
1526VWL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.12020-06-03
1537OIG|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 3Electron microscopy3.22022-01-19
1546X6T|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.22020-09-02
1557ST7|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.22022-02-23
1566YST|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.22020-08-19
1577K53|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.22021-07-28
1587SSO|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.22022-02-23
1597LV0|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.22021-07-28
1607SSN|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.22022-02-23
1617K54|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.22021-07-28
1627ACJ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.22021-08-18
1636ENF|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.22017-11-22
1646WDD|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.22020-07-01
1655U9G|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
1665U9F|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
1675UYM|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
1686C4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
1697ABZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.212021-08-18
1705WDT|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
1717JT1|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF0000170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.32020-11-11
1726WDF|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.32020-07-01
1737K55|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.32021-07-28
1747SSD|1|25S ribosomal RNA5S RNAEscherichia coli K-12BacteriaRF00001Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.32022-02-23
1756WDG|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.32020-07-01
1767CPJ|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001ycbZ-stalled 70S ribosomeElectron microscopy3.32021-12-08
1776OG7|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.32019-09-25
1786WD1|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.32020-07-01
1797BV8|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Mature 50S ribosomal subunit from RrmJ knock out E.coli strainElectron microscopy3.142020-07-01
1805WE4|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
1817BL5|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli str. K-12 substr. MG1655BacteriaRF00001pre-50S-ObgE particleElectron microscopy3.32021-05-12
1826OFX|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Non-rotated ribosome (Structure I)Electron microscopy3.32019-09-25
1837K50|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.42021-07-28
1847K52|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.42021-07-28
1853JBV|1|a5S ribosomal RNARNA (118-MER)Escherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
1865GAE|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
1876I0Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.22018-12-05
1887ACR|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of post-translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.442021-08-18
1895MDY|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1905WFK|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
1915LZD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
1926OGI|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.42019-09-25
1933JCE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
1946ZTM|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.32020-09-16
1955O2R|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.42017-07-26
1966ZTJ|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.42020-09-16
1977NSP|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.52021-08-11
1986X7F|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.52020-09-02
1997JT2|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF0000170S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.52020-11-11
2007K51|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.52021-07-28
2015LZE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
2026BU8|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
2037OJ0|1|b5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2Electron microscopy3.52021-09-15
2047D6Z|1|B5S ribosomal RNA5S ribosomal rRNAEscherichia coliBacteriaRF00001Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.42021-04-07
2056VWM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.42020-06-03
2066OSQ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
2076VWN|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.42020-06-03
2085U4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
2096ORL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
2105WE6|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
2115IQR|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
2127BL3|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001pre-50S-ObgE particle state 2Electron microscopy3.52021-05-12
2136ZTL|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.52020-09-16

Release history

Release3.219
Date2022-02-23

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_10157.88NR_3.5_10157.873.219(207) 3JBV|1|a, 3JCE|1|B, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V54|1|BA, 4V54|1|DA, 4V57|1|BA, 4V57|1|DA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V85|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAE|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYM|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6C4I|1|B, 6ENF|1|B, 6ENU|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6LKQ|1|u, 6OFX|1|2, 6OG7|1|2, 6OGI|1|2, 6OM6|1|3, 6ORE|1|3, 6ORL|1|3, 6OSQ|1|3, 6PC5|1|J, 6PC6|1|J, 6PC7|1|J, 6PC8|1|J, 6PCH|1|J, 6PCQ|1|J, 6PCR|1|J, 6PCS|1|J, 6PCT|1|J, 6PJ6|1|J, 6QDW|1|a, 6QUL|1|B, 6S0K|1|B, 6SZS|1|B, 6TBV|1|05S1, 6TC3|1|05S1, 6U48|1|CB, 6VWL|1|3, 6VWM|1|3, 6VWN|1|3, 6WD0|1|2, 6WD1|1|2, 6WDD|1|2, 6WDE|1|2, 6WDF|1|2, 6WDG|1|2, 6WYV|1|J, 6X6T|1|d, 6X7F|1|d, 6X7K|1|d, 6XZ7|1|B, 6XZA|1|B2, 6XZB|1|B2, 6Y69|1|B, 6YS3|1|a, 6YSR|1|B, 6YSS|1|B, 6YST|1|B, 6ZTJ|1|BB, 6ZTL|1|BB, 6ZTM|1|BB, 6ZTO|1|BB, 6ZTP|1|BB, 6ZU1|1|BB, 7ABZ|1|3, 7AC7|1|3, 7ACJ|1|3, 7ACR|1|3, 7B5K|1|B, 7BL3|1|B, 7BL4|1|B, 7BL5|1|B, 7BV8|1|B, 7CPJ|1|B, 7D6Z|1|B, 7JT1|1|2, 7JT2|1|2, 7K00|1|b, 7K50|1|2, 7K51|1|2, 7K52|1|2, 7K53|1|2, 7K54|1|2, 7K55|1|2, 7LV0|1|2, 7LVK|1|J, 7N1P|1|5, 7N2C|1|5, 7N2U|1|5, 7N2V|1|5, 7N30|1|5, 7N31|1|5, 7NSO|1|B, 7NSP|1|B, 7NSQ|1|B, 7NWT|1|3, 7NWW|1|3, 7O19|1|BB, 7O1A|1|BB, 7O1C|1|BB, 7OIF|1|3, 7OIG|1|3, 7OII|1|3, 7OIZ|1|b, 7OJ0|1|b, 7OT5|1|3, 7P3K|1|b, 7PJS|1|B, 7PJV|1|B, 7PJY|1|B, 7S1G|1|J, 7S1H|1|J, 7S1K|1|J(6) 7SSD|1|2, 7SSN|1|2, 7SSO|1|2, 7ST2|1|2, 7ST6|1|2, 7ST7|1|2(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_10157.88NR_3.5_10157.893.220(213) 3JBV|1|a, 3JCE|1|B, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V54|1|BA, 4V54|1|DA, 4V57|1|BA, 4V57|1|DA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V85|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAE|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYM|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6C4I|1|B, 6ENF|1|B, 6ENU|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6LKQ|1|u, 6OFX|1|2, 6OG7|1|2, 6OGI|1|2, 6OM6|1|3, 6ORE|1|3, 6ORL|1|3, 6OSQ|1|3, 6PC5|1|J, 6PC6|1|J, 6PC7|1|J, 6PC8|1|J, 6PCH|1|J, 6PCQ|1|J, 6PCR|1|J, 6PCS|1|J, 6PCT|1|J, 6PJ6|1|J, 6QDW|1|a, 6QUL|1|B, 6S0K|1|B, 6SZS|1|B, 6TBV|1|05S1, 6TC3|1|05S1, 6U48|1|CB, 6VWL|1|3, 6VWM|1|3, 6VWN|1|3, 6WD0|1|2, 6WD1|1|2, 6WDD|1|2, 6WDE|1|2, 6WDF|1|2, 6WDG|1|2, 6WYV|1|J, 6X6T|1|d, 6X7F|1|d, 6X7K|1|d, 6XZ7|1|B, 6XZA|1|B2, 6XZB|1|B2, 6Y69|1|B, 6YS3|1|a, 6YSR|1|B, 6YSS|1|B, 6YST|1|B, 6ZTJ|1|BB, 6ZTL|1|BB, 6ZTM|1|BB, 6ZTO|1|BB, 6ZTP|1|BB, 6ZU1|1|BB, 7ABZ|1|3, 7AC7|1|3, 7ACJ|1|3, 7ACR|1|3, 7B5K|1|B, 7BL3|1|B, 7BL4|1|B, 7BL5|1|B, 7BV8|1|B, 7CPJ|1|B, 7D6Z|1|B, 7JT1|1|2, 7JT2|1|2, 7K00|1|b, 7K50|1|2, 7K51|1|2, 7K52|1|2, 7K53|1|2, 7K54|1|2, 7K55|1|2, 7LV0|1|2, 7LVK|1|J, 7N1P|1|5, 7N2C|1|5, 7N2U|1|5, 7N2V|1|5, 7N30|1|5, 7N31|1|5, 7NSO|1|B, 7NSP|1|B, 7NSQ|1|B, 7NWT|1|3, 7NWW|1|3, 7O19|1|BB, 7O1A|1|BB, 7O1C|1|BB, 7OIF|1|3, 7OIG|1|3, 7OII|1|3, 7OIZ|1|b, 7OJ0|1|b, 7OT5|1|3, 7P3K|1|b, 7PJS|1|B, 7PJV|1|B, 7PJY|1|B, 7S1G|1|J, 7S1H|1|J, 7S1K|1|J, 7SSD|1|2, 7SSN|1|2, 7SSO|1|2, 7ST2|1|2, 7ST6|1|2, 7ST7|1|2(0) (3) 7NBU|1|b, 7S1I|1|J, 7S1J|1|J

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17BL5|1|Bpre-50S-ObgE particleELECTRON MICROSCOPY3.3119
26VWM|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.4120
36VWN|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.4120
46VWL|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.1120
57ABZ|1|3Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.21118
66ORL|1|3RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.5120
75GAE|1|BRNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.33120
86OFX|1|2Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.3120
96OG7|1|270S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.3120
106OGI|1|270S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.4120
117JT1|1|270S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.3120
127JT2|1|270S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.5120
135U4I|1|BStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.5118
147BL3|1|Bpre-50S-ObgE particle state 2ELECTRON MICROSCOPY3.5119
153JCE|1|BStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.2118
167ACR|1|3Structure of post-translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.44120
177ACJ|1|3Structure of translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.2120
185WE6|1|B70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.4120
197SSN|1|2Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.2120
207ST7|1|2Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.2120
217SSO|1|2Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.2120
227K51|1|2Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.5120
237SSD|1|2Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.3120
245U9G|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.2119
255U9F|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.2119
267LV0|1|2Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.2120
277ST6|1|2Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY3120
287K50|1|2Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.4120
297K53|1|2Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.2120
307K54|1|2Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.2120
317K52|1|2Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.4120
327K55|1|2Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.3120
336BU8|1|0270S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.5120
346WD0|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY3120
356WD1|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.3120
366WDG|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.3120
376WDF|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.3120
386WDE|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY3120
396WDD|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.2120
405UYM|1|0270S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.2120
417CPJ|1|BycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.3120
426ENF|1|BCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.2120
436ENU|1|BPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.1120
446Y69|1|BCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.86120
456H4N|1|BStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY3120
465LZE|1|BStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.5120
477ST2|1|2Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.9120
485MGP|1|BStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.1120
495WFS|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY3120
505AFI|1|B2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.9120
515WE4|1|B70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.1120
525WDT|1|B70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY3120
535WFK|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.4120
545O2R|1|BCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.4120
556YST|1|BStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.2120
566YSR|1|BStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.1120
576YSS|1|BStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.6120
587PJS|1|BStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.35120
597PJY|1|BStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.1120
607PJV|1|BStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.1120
615IQR|1|3Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY3118
626PJ6|1|JHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.2118
637LVK|1|JCfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.2118
646SZS|1|BRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.06120
657NSQ|1|BStructure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.1120
667NSO|1|BStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.9120
677NSP|1|BStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.5120
685LZD|1|BStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.4120
696ZTL|1|BBE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.5120
707BV8|1|BMature 50S ribosomal subunit from RrmJ knock out E.coli strainELECTRON MICROSCOPY3.14120
716S0K|1|BRibosome nascent chain in complex with SecAELECTRON MICROSCOPY3.1120
726ZTM|1|BBE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.3120
736ZTJ|1|BBE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.4120
746ZTP|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY3120
756ZU1|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY3120
766ZTO|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY3120
776XZB|1|B2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.54120
786XZ7|1|BE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.1120
796XZA|1|B2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.66120
806QUL|1|BStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY3120
817N30|1|5Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.66120
827N1P|1|5Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.33120
837N31|1|5Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.69120
847N2U|1|5Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.53120
857N2V|1|5Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.54120
867N2C|1|5Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.72120
877K00|1|bStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.98119
887OJ0|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2ELECTRON MICROSCOPY3.5119
897OIZ|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptideELECTRON MICROSCOPY2.9119
907P3K|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptide (control)ELECTRON MICROSCOPY2.9119
917B5K|1|BE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.9120
926TBV|1|05S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.7120
936TC3|1|05S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.7120
947O1A|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.4120
957O19|1|BBCryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.9120
967O1C|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.6120
975H5U|1|BMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.01120
986HRM|1|3E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.96120
997D6Z|1|BMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.4118
1007NWT|1|3Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.66120
1017AC7|1|3Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.08120
1027BL4|1|Bin vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.4119
1036U48|1|CBE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.87118
1046PC8|1|JE. coli 50S ribosome bound to compound 40qELECTRON MICROSCOPY2.9118
1056PCT|1|JE. coli 50S ribosome bound to compound 41qELECTRON MICROSCOPY2.8118
1066PCQ|1|JE. coli 50S ribosome bound to VM2ELECTRON MICROSCOPY2.6118
1076PCS|1|JE. coli 50S ribosome bound to compound 40eELECTRON MICROSCOPY2.8118
1086PC6|1|JE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.5118
1096PCR|1|JE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.5118
1106PC5|1|JE. coli 50S ribosome bound to compounds 46 and VS1ELECTRON MICROSCOPY2.7118
1116PC7|1|JE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.5118
1126PCH|1|JE. coli 50S ribosome bound to compound 21ELECTRON MICROSCOPY2.9118
1136WYV|1|JE. coli 50S ribosome bound to compounds 47 and VS1ELECTRON MICROSCOPY2.75118
1146OSQ|1|3RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.5120
1157S1K|1|JCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.42118
1167S1H|1|JWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.35118
1177S1G|1|Jwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.48118
1186ORE|1|3Release complex 70SELECTRON MICROSCOPY2.9120
1197OIG|1|3CspA-27 cotranslational folding intermediate 3ELECTRON MICROSCOPY3.2120
1207NWW|1|3CspA-27 cotranslational folding intermediate 1ELECTRON MICROSCOPY3.05120
1217OIF|1|3CspA-27 cotranslational folding intermediate 2ELECTRON MICROSCOPY3120
1227OT5|1|3CspA-70 cotranslational folding intermediate 1ELECTRON MICROSCOPY2.9120
1237OII|1|3CspA-70 cotranslational folding intermediate 2ELECTRON MICROSCOPY3120
1245NWY|1|O2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.9118
1256C4I|1|BConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.24120
1265MDV|1|3Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.97120
1275MDZ|1|3Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.1120
1286X6T|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.2120
1296X7K|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.1120
1306X7F|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.5120
1315MDW|1|3Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.06120
1325MDY|1|3Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.35120
1334V9P|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1344V9O|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1354YBB|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1118
1365JC9|1|CBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03118
1375J7L|1|CBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3118
1385J8A|1|CBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1118
1395J5B|1|CBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8118
1405J91|1|CBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96118
1415IT8|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12118
1425J88|1|CBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32118
1436LKQ|1|uThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.1118
1444V85|1|BBCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.2118
1454V7U|1|BBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1118
1464V6C|1|BBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19118
1474V7T|1|BBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19118
1484V7V|1|BBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29118
1494V7S|1|BBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25118
1504WWW|1|RBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1118
1514U1V|1|BBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3119
1524U24|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9119
1534U26|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8119
1544U25|1|BBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9119
1554U27|1|BBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8119
1564U20|1|BBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9119
1574U1U|1|BBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95119
1584WF1|1|BBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09119
1595J88|1|DBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32120
1605IT8|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12120
1615JC9|1|DBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03120
1625J7L|1|DBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3120
1635J8A|1|DBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1120
1645J91|1|DBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96120
1655J5B|1|DBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8120
1664YBB|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1120
1676I7V|1|DBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9119
1684V9D|1|CBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3119
1694V9C|1|DBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3119
1704WOI|1|BB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3119
1716I0Y|1|BTnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.2118
1724V9O|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1734V9O|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1744V9P|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1754V9P|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1764WOI|1|CB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3118
1774V9C|1|BBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3118
1784V9D|1|DBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3118
1794WF1|1|DBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09118
1804U1U|1|DBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95118
1814U20|1|DBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9118
1824U1V|1|DBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3118
1834U27|1|DBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8118
1844U25|1|DBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9118
1854U26|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8118
1864U24|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9118
1876I7V|1|CBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9118
1884V7U|1|DBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1117
1894V7V|1|DBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29117
1904V7T|1|DBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19117
1914V7S|1|DBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25117
1924V6C|1|DBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19117
1934WWW|1|YBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1117
1944V9P|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1954V9O|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1966OM6|1|3Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.1120
1974V4H|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
1984V4Q|1|BACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
1994V50|1|BACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
2004V50|1|DACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
2014V57|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
2024V52|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
2034V64|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
2044V54|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
2054V54|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
2064V64|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
2074V52|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
2084V57|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
2094V4H|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
2104V4Q|1|DACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
2113JBV|1|aMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.32117
2126YS3|1|aCryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.58118
2136QDW|1|aCryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.83118

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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