#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|DB (rep)5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
25JC9|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
35J8A|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
44YBB|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
56I7V|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
64WOI|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
75IT8|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
85J91|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
94U27|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
105J88|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
114WF1|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
124WOI|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
134V9D|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
144V9P|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
154V9P|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
164U24|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
174V9O|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
184WWW|1|RB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
194U26|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
204V9P|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
214V7T|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
224V9O|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
234V6C|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
244U25|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
254V9O|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
264V9P|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
274U1U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
286LKQ|1|u5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.12020-05-06
294V7U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
304U20|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
314V7V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
324V9C|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
334U1V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
344V52|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
355J7L|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
364V52|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
374V7S|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
385J8A|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
394V9D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
404V50|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
415JC9|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
424V85|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
436I7V|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
444V57|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
454V64|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
464V64|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
474V57|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
484V54|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
494V54|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
504V9O|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
514U27|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
524WF1|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
535J88|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
544U25|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
554V4Q|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
564U1V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
574V50|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
584V4Q|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
594YBB|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
604U26|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
614U1U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
624V9C|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
634V7T|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
644U20|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
655IT8|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
664U24|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
674WWW|1|YB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
685J91|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
694V6C|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
704V7V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
714V7S|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
724V7U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
735J5B|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
744V4H|1|BA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
754V4H|1|DA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
765J5B|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
777K00|1|b5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
786XZ7|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.12020-07-22
797LVK|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cfr-modified 50S subunit from Escherichia coliElectron microscopy2.22021-12-15
806PJ6|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High resolution cryo-EM structure of E.coli 50SElectron microscopy2.22020-01-22
817N1P|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
827PJS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.352021-10-20
837O1A|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.42021-09-01
847S1H|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.352021-11-17
857S1K|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.422022-01-19
867BL4|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.42021-05-12
877N2U|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.532021-07-14
887S1J|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli ribosome with antibiotic radezolidElectron microscopy2.472022-03-02
897N2V|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.542021-07-14
907S1G|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
917S1I|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.482022-03-02
927UG7|1|55S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.582022-05-18
936XZB|1|B25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.542020-11-04
946YSS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.62020-08-19
956PC6|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 47Electron microscopy2.52020-06-17
966PCR|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40oElectron microscopy2.52020-06-17
976PC7|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 46Electron microscopy2.52020-06-17
986YS3|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideElectron microscopy2.582020-09-30
997O1C|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanElectron microscopy2.62021-09-01
1007N30|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.662021-07-14
1017NWT|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.662021-12-15
1027N31|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.692021-07-14
1036TBV|1|05S15S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.72020-01-01
1046TC3|1|05S15S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.72020-01-01
1056XZA|1|B25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.662020-11-04
1067N2C|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.722021-07-14
1076PCQ|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to VM2Electron microscopy2.62020-06-17
1086PC5|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compounds 46 and VS1Electron microscopy2.72020-06-17
1096QDW|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideElectron microscopy2.832020-01-15
1107NSO|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.92021-07-14
1117ST2|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.92022-02-23
1125AFI|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000012.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1137OT5|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-70 cotranslational folding intermediate 1Electron microscopy2.92022-01-19
1147B5K|1|B5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.92021-05-26
1157OTC|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli BL21(DE3)BacteriaRF00001Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BElectron microscopy2.92022-05-11
1166Y69|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.862020-07-01
1177O19|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanElectron microscopy2.92021-09-01
1186ORE|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release complex 70SElectron microscopy2.92019-06-19
1197OIZ|1|bSmall subunit ribosomal RNA fragment16S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptideElectron microscopy2.92021-09-15
1207P3K|1|b5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)Electron microscopy2.92021-10-27
1216PCT|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 41qElectron microscopy2.82020-06-17
1226WYV|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compounds 47 and VS1Electron microscopy2.752020-06-17
1237TOS|1|5S5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.92022-05-25
1246U48|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.872019-09-18
1255NWY|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF000012.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
1265MDV|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
1276ZTP|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32020-09-16
1286ZU1|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32020-09-16
1296ZTO|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32020-09-23
1307OII|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-70 cotranslational folding intermediate 2Electron microscopy32022-01-19
1317OIF|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 2Electron microscopy32022-01-19
1327ST6|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
1336WDE|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
1346PCS|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40eElectron microscopy2.82020-06-17
1355H5U|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
1366WD0|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy32020-07-01
1376HRM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S d2d8 stapled ribosomeElectron microscopy2.962018-12-19
1386PC8|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40qElectron microscopy2.92020-06-17
1396H4N|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
1407NWW|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 1Electron microscopy3.052022-01-19
1416QUL|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy32019-04-10
1427AC7|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.082021-08-18
1436SZS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.062019-12-04
1446PCH|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 21Electron microscopy2.92020-06-17
1455WFS|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1467NSQ|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.12021-07-14
1477PJV|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.12021-10-20
1485MDZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
1496S0K|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosome nascent chain in complex with SecAElectron microscopy3.12019-10-09
1506YSR|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 stalled ribosome complexElectron microscopy3.12020-08-19
1516X7K|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.12020-09-02
1527PJY|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.12021-10-20
1536OM6|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.12021-02-10
1547NBU|1|b5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.Electron microscopy3.112022-03-02
1556ENU|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.12017-11-22
1565MDW|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
1575MGP|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
1586VWL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.12020-06-03
1597OIG|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 3Electron microscopy3.22022-01-19
1606X6T|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.22020-09-02
1617ST7|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.22022-02-23
1626YST|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.22020-08-19
1637K53|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.22021-07-28
1647SSO|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.22022-02-23
1657LV0|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.22021-07-28
1667SSN|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.22022-02-23
1677K54|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.22021-07-28
1687ACJ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.22021-08-18
1696ENF|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.22017-11-22
1706WDD|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.22020-07-01
1715U9G|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
1725U9F|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
1735UYM|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
1746C4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
1757ABZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.212021-08-18
1765WDT|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
1777JT1|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF0000170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.32020-11-11
1786WDF|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.32020-07-01
1797K55|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.32021-07-28
1807SSD|1|25S ribosomal RNA5S RNAEscherichia coli K-12BacteriaRF00001Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.32022-02-23
1816WDG|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.32020-07-01
1827CPJ|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001ycbZ-stalled 70S ribosomeElectron microscopy3.32021-12-08
1836OG7|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.32019-09-25
1846WD1|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.32020-07-01
1857BV8|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Mature 50S ribosomal subunit from RrmJ knock out E.coli strainElectron microscopy3.142020-07-01
1865WE4|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
1877BL5|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli str. K-12 substr. MG1655BacteriaRF00001pre-50S-ObgE particleElectron microscopy3.32021-05-12
1886OFX|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Non-rotated ribosome (Structure I)Electron microscopy3.32019-09-25
1897K50|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.42021-07-28
1907K52|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.42021-07-28
1913JBV|1|a5S ribosomal RNARNA (118-MER)Escherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
1925GAE|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with a translocating SecYEGElectron microscopy3.332016-01-27
1936I0Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.22018-12-05
1947QGN|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeElectron microscopy3.372022-04-27
1957ACR|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of post-translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.442021-08-18
1965MDY|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1975WFK|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
1985LZD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
1996OGI|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.42019-09-25
2003JCE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
2016ZTM|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.32020-09-16
2025O2R|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.42017-07-26
2036ZTJ|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.42020-09-16
2047NSP|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.52021-08-11
2056X7F|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.52020-09-02
2067JT2|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF0000170S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.52020-11-11
2077K51|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.52021-07-28
2085LZE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
2096BU8|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
2107OJ0|1|b5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2Electron microscopy3.52021-09-15
2117D6Z|1|B5S ribosomal RNA5S ribosomal rRNAEscherichia coliBacteriaRF00001Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.42021-04-07
2126VWM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.42020-06-03
2136OSQ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
2146VWN|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.42020-06-03
2155U4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
2166ORL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
2175WE6|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
2185IQR|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
2197BL3|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001pre-50S-ObgE particle state 2Electron microscopy3.52021-05-12
2206ZTL|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.52020-09-16

Release history

Release3.2363.2373.2383.2393.2403.241
Date2022-06-222022-06-292022-07-062022-07-132022-07-202022-07-27

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_10157.95NR_3.5_10157.943.236(220) 3JBV|1|a, 3JCE|1|B, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V54|1|BA, 4V54|1|DA, 4V57|1|BA, 4V57|1|DA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V85|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAE|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYM|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6C4I|1|B, 6ENF|1|B, 6ENU|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6LKQ|1|u, 6OFX|1|2, 6OG7|1|2, 6OGI|1|2, 6OM6|1|3, 6ORE|1|3, 6ORL|1|3, 6OSQ|1|3, 6PC5|1|J, 6PC6|1|J, 6PC7|1|J, 6PC8|1|J, 6PCH|1|J, 6PCQ|1|J, 6PCR|1|J, 6PCS|1|J, 6PCT|1|J, 6PJ6|1|J, 6QDW|1|a, 6QUL|1|B, 6S0K|1|B, 6SZS|1|B, 6TBV|1|05S1, 6TC3|1|05S1, 6U48|1|CB, 6VWL|1|3, 6VWM|1|3, 6VWN|1|3, 6WD0|1|2, 6WD1|1|2, 6WDD|1|2, 6WDE|1|2, 6WDF|1|2, 6WDG|1|2, 6WYV|1|J, 6X6T|1|d, 6X7F|1|d, 6X7K|1|d, 6XZ7|1|B, 6XZA|1|B2, 6XZB|1|B2, 6Y69|1|B, 6YS3|1|a, 6YSR|1|B, 6YSS|1|B, 6YST|1|B, 6ZTJ|1|BB, 6ZTL|1|BB, 6ZTM|1|BB, 6ZTO|1|BB, 6ZTP|1|BB, 6ZU1|1|BB, 7ABZ|1|3, 7AC7|1|3, 7ACJ|1|3, 7ACR|1|3, 7B5K|1|B, 7BL3|1|B, 7BL4|1|B, 7BL5|1|B, 7BV8|1|B, 7CPJ|1|B, 7D6Z|1|B, 7JT1|1|2, 7JT2|1|2, 7K00|1|b, 7K50|1|2, 7K51|1|2, 7K52|1|2, 7K53|1|2, 7K54|1|2, 7K55|1|2, 7LV0|1|2, 7LVK|1|J, 7N1P|1|5, 7N2C|1|5, 7N2U|1|5, 7N2V|1|5, 7N30|1|5, 7N31|1|5, 7NBU|1|b, 7NSO|1|B, 7NSP|1|B, 7NSQ|1|B, 7NWT|1|3, 7NWW|1|3, 7O19|1|BB, 7O1A|1|BB, 7O1C|1|BB, 7OIF|1|3, 7OIG|1|3, 7OII|1|3, 7OIZ|1|b, 7OJ0|1|b, 7OT5|1|3, 7OTC|1|B, 7P3K|1|b, 7PJS|1|B, 7PJV|1|B, 7PJY|1|B, 7QGN|1|O, 7S1G|1|J, 7S1H|1|J, 7S1I|1|J, 7S1J|1|J, 7S1K|1|J, 7SSD|1|2, 7SSN|1|2, 7SSO|1|2, 7ST2|1|2, 7ST6|1|2, 7ST7|1|2, 7TOS|1|5S, 7UG7|1|5(0) (0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_10157.95NR_3.5_10157.963.242(220) 3JBV|1|a, 3JCE|1|B, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V54|1|BA, 4V54|1|DA, 4V57|1|BA, 4V57|1|DA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V85|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAE|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYM|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6C4I|1|B, 6ENF|1|B, 6ENU|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6LKQ|1|u, 6OFX|1|2, 6OG7|1|2, 6OGI|1|2, 6OM6|1|3, 6ORE|1|3, 6ORL|1|3, 6OSQ|1|3, 6PC5|1|J, 6PC6|1|J, 6PC7|1|J, 6PC8|1|J, 6PCH|1|J, 6PCQ|1|J, 6PCR|1|J, 6PCS|1|J, 6PCT|1|J, 6PJ6|1|J, 6QDW|1|a, 6QUL|1|B, 6S0K|1|B, 6SZS|1|B, 6TBV|1|05S1, 6TC3|1|05S1, 6U48|1|CB, 6VWL|1|3, 6VWM|1|3, 6VWN|1|3, 6WD0|1|2, 6WD1|1|2, 6WDD|1|2, 6WDE|1|2, 6WDF|1|2, 6WDG|1|2, 6WYV|1|J, 6X6T|1|d, 6X7F|1|d, 6X7K|1|d, 6XZ7|1|B, 6XZA|1|B2, 6XZB|1|B2, 6Y69|1|B, 6YS3|1|a, 6YSR|1|B, 6YSS|1|B, 6YST|1|B, 6ZTJ|1|BB, 6ZTL|1|BB, 6ZTM|1|BB, 6ZTO|1|BB, 6ZTP|1|BB, 6ZU1|1|BB, 7ABZ|1|3, 7AC7|1|3, 7ACJ|1|3, 7ACR|1|3, 7B5K|1|B, 7BL3|1|B, 7BL4|1|B, 7BL5|1|B, 7BV8|1|B, 7CPJ|1|B, 7D6Z|1|B, 7JT1|1|2, 7JT2|1|2, 7K00|1|b, 7K50|1|2, 7K51|1|2, 7K52|1|2, 7K53|1|2, 7K54|1|2, 7K55|1|2, 7LV0|1|2, 7LVK|1|J, 7N1P|1|5, 7N2C|1|5, 7N2U|1|5, 7N2V|1|5, 7N30|1|5, 7N31|1|5, 7NBU|1|b, 7NSO|1|B, 7NSP|1|B, 7NSQ|1|B, 7NWT|1|3, 7NWW|1|3, 7O19|1|BB, 7O1A|1|BB, 7O1C|1|BB, 7OIF|1|3, 7OIG|1|3, 7OII|1|3, 7OIZ|1|b, 7OJ0|1|b, 7OT5|1|3, 7OTC|1|B, 7P3K|1|b, 7PJS|1|B, 7PJV|1|B, 7PJY|1|B, 7QGN|1|O, 7S1G|1|J, 7S1H|1|J, 7S1I|1|J, 7S1J|1|J, 7S1K|1|J, 7SSD|1|2, 7SSN|1|2, 7SSO|1|2, 7ST2|1|2, 7ST6|1|2, 7ST7|1|2, 7TOS|1|5S, 7UG7|1|5(0) (1) 7SA4|1|4

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16VWM|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.4120
26VWN|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.4120
36VWL|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.1120
46OGI|1|270S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.4120
56OFX|1|2Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.3120
66OG7|1|270S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.3120
77JT2|1|270S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.5120
87JT1|1|270S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.3120
97ACJ|1|3Structure of translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.2120
107ACR|1|3Structure of post-translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.44120
113JCE|1|BStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.2118
127BL3|1|Bpre-50S-ObgE particle state 2ELECTRON MICROSCOPY3.5119
135WE6|1|B70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.4120
147SSN|1|2Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.2120
157SSO|1|2Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.2120
167ST7|1|2Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.2120
175U9F|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.2119
185U9G|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.2119
197SSD|1|2Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.3120
207K51|1|2Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.5120
217K50|1|2Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.4120
227ST6|1|2Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY3120
236ENF|1|BCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.2120
246BU8|1|0270S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.5120
256WD1|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.3120
266WDG|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.3120
276WDF|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.3120
286WDE|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY3120
296WDD|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.2120
306WD0|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY3120
315UYM|1|0270S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.2120
327K55|1|2Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.3120
337K52|1|2Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.4120
347K54|1|2Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.2120
357K53|1|2Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.2120
367TOS|1|5SE. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.9120
377LV0|1|2Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.2120
385LZE|1|BStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.5120
397ST2|1|2Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.9120
405MGP|1|BStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.1120
416Y69|1|BCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.86120
426H4N|1|BStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY3120
436ENU|1|BPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.1120
447NBU|1|bStructure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.ELECTRON MICROSCOPY3.11120
455AFI|1|B2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.9120
465O2R|1|BCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.4120
475WFK|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.4120
485WDT|1|B70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY3120
495WE4|1|B70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.1120
505WFS|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY3120
517CPJ|1|BycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.3120
526YST|1|BStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.2120
535IQR|1|3Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY3118
546PJ6|1|JHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.2118
557LVK|1|JCfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.2118
567NSP|1|BStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.5120
577NSO|1|BStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.9120
587NSQ|1|BStructure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.1120
596SZS|1|BRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.06120
606ZTL|1|BBE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.5120
615LZD|1|BStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.4120
627BV8|1|BMature 50S ribosomal subunit from RrmJ knock out E.coli strainELECTRON MICROSCOPY3.14120
636QUL|1|BStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY3120
646XZ7|1|BE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.1120
656XZB|1|B2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.54120
666XZA|1|B2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.66120
676ZTO|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY3120
686ZU1|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY3120
696ZTP|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY3120
706ZTJ|1|BBE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.4120
716ZTM|1|BBE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.3120
726S0K|1|BRibosome nascent chain in complex with SecAELECTRON MICROSCOPY3.1120
737UG7|1|570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.58120
747N30|1|5Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.66120
757N1P|1|5Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.33120
767N31|1|5Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.69120
777N2C|1|5Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.72120
787K00|1|bStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.98119
797N2V|1|5Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.54120
807N2U|1|5Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.53120
817OTC|1|BCryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BELECTRON MICROSCOPY2.9120
827OJ0|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2ELECTRON MICROSCOPY3.5119
837P3K|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptide (control)ELECTRON MICROSCOPY2.9119
847OIZ|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptideELECTRON MICROSCOPY2.9119
857O19|1|BBCryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.9120
867O1A|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.4120
876TC3|1|05S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.7120
886TBV|1|05S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.7120
897B5K|1|BE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.9120
907O1C|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.6120
915H5U|1|BMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.01120
926HRM|1|3E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.96120
937D6Z|1|BMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.4118
947NWT|1|3Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.66120
957OII|1|3CspA-70 cotranslational folding intermediate 2ELECTRON MICROSCOPY3120
967OT5|1|3CspA-70 cotranslational folding intermediate 1ELECTRON MICROSCOPY2.9120
977OIF|1|3CspA-27 cotranslational folding intermediate 2ELECTRON MICROSCOPY3120
987NWW|1|3CspA-27 cotranslational folding intermediate 1ELECTRON MICROSCOPY3.05120
997OIG|1|3CspA-27 cotranslational folding intermediate 3ELECTRON MICROSCOPY3.2120
1006ORE|1|3Release complex 70SELECTRON MICROSCOPY2.9120
1017QGN|1|OStructure of the SmrB-bound E. coli disome - stalled 70S ribosomeELECTRON MICROSCOPY3.37118
1025NWY|1|O2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.9118
1036C4I|1|BConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.24120
1045MDV|1|3Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.97120
1056X7F|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.5120
1066X7K|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.1120
1076X6T|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.2120
1085MDZ|1|3Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.1120
1095MDW|1|3Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.06120
1105MDY|1|3Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.35120
1117S1K|1|JCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.42118
1127S1H|1|JWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.35118
1137S1G|1|Jwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.48118
1147S1I|1|JWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.48118
1157S1J|1|JWild-type Escherichia coli ribosome with antibiotic radezolidELECTRON MICROSCOPY2.47118
1166OSQ|1|3RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.5120
1176WYV|1|JE. coli 50S ribosome bound to compounds 47 and VS1ELECTRON MICROSCOPY2.75118
1186PCH|1|JE. coli 50S ribosome bound to compound 21ELECTRON MICROSCOPY2.9118
1196PCT|1|JE. coli 50S ribosome bound to compound 41qELECTRON MICROSCOPY2.8118
1206PC7|1|JE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.5118
1216PCQ|1|JE. coli 50S ribosome bound to VM2ELECTRON MICROSCOPY2.6118
1226PC6|1|JE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.5118
1236PC5|1|JE. coli 50S ribosome bound to compounds 46 and VS1ELECTRON MICROSCOPY2.7118
1246PCR|1|JE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.5118
1256PCS|1|JE. coli 50S ribosome bound to compound 40eELECTRON MICROSCOPY2.8118
1266PC8|1|JE. coli 50S ribosome bound to compound 40qELECTRON MICROSCOPY2.9118
1277BL4|1|Bin vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.4119
1287AC7|1|3Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.08120
1296U48|1|CBE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.87118
1304V9P|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1314V9P|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1324V9O|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1334V9O|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1346I0Y|1|BTnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.2118
1354V9D|1|CBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3119
1364V9C|1|DBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3119
1374WOI|1|BB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3119
1386I7V|1|DBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9119
1394YBB|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1120
1405J5B|1|DBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8120
1415J91|1|DBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96120
1425J8A|1|DBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1120
1435J7L|1|DBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3120
1445JC9|1|DBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03120
1455IT8|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12120
1465J88|1|DBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32120
1474WF1|1|BBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09119
1484U26|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8119
1494U24|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9119
1504U25|1|BBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9119
1514U27|1|BBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8119
1524U1U|1|BBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95119
1534U20|1|BBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9119
1544U1V|1|BBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3119
1554V7U|1|BBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1118
1564V7V|1|BBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29118
1574V7T|1|BBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19118
1584V6C|1|BBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19118
1594V7S|1|BBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25118
1604WWW|1|RBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1118
1614V85|1|BBCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.2118
1626LKQ|1|uThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.1118
1634V9O|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1644V9P|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1655J88|1|CBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32118
1665IT8|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12118
1675J5B|1|CBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8118
1685J91|1|CBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96118
1695J8A|1|CBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1118
1705J7L|1|CBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3118
1715JC9|1|CBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03118
1724YBB|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1118
1734V9D|1|DBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3118
1744WF1|1|DBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09118
1754U1U|1|DBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95118
1764U20|1|DBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9118
1774U1V|1|DBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3118
1784U27|1|DBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8118
1794U25|1|DBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9118
1804U24|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9118
1814U26|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8118
1826I7V|1|CBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9118
1834V7U|1|DBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1117
1844V7V|1|DBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29117
1854V7T|1|DBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19117
1864V6C|1|DBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19117
1874V7S|1|DBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25117
1884WWW|1|YBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1117
1894WOI|1|CB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3118
1904V9C|1|BBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3118
1914V9P|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1924V9O|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
1935U4I|1|BStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.5118
1946YSR|1|BStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.1120
1956YSS|1|BStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.6120
1967PJS|1|BStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.35120
1977PJY|1|BStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.1120
1987PJV|1|BStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.1120
1995GAE|1|BRNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.33120
2006ORL|1|3RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.5120
2017ABZ|1|3Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.21118
2026OM6|1|3Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.1120
2037BL5|1|Bpre-50S-ObgE particleELECTRON MICROSCOPY3.3119
2043JBV|1|aMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.32117
2056QDW|1|aCryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.83118
2066YS3|1|aCryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.58118
2074V4H|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
2084V4Q|1|BACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
2094V50|1|DACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
2104V50|1|BACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
2114V54|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
2124V64|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
2134V52|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
2144V57|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
2154V57|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
2164V52|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
2174V64|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
2184V54|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
2194V4Q|1|DACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
2204V4H|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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