#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
15J7L|1|DB (rep)5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction31202016-07-27
25JC9|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.031202016-07-06
35J8A|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.11202016-07-06
44YBB|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.11202015-03-18
56I7V|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.91192018-12-05
64WOI|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction31192015-08-05
75IT8|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.121202016-07-27
85J91|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.961202016-07-06
94U27|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.81192014-07-30
105J88|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.321202016-07-06
114WF1|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.091192014-11-05
124WOI|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000014,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction31182015-08-05
134V9D|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction31192014-07-09
144V9P|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
154V9P|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
164U24|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.91192014-07-30
174V9O|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
184WWW|1|RB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.11182014-12-24
194U26|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.81192014-07-30
204V9P|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
214V7T|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.191182014-07-09
224V9O|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
234V6C|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.191182014-07-09
244U25|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.91192014-07-30
254V9O|1|EB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
264V9P|1|AB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
274U1U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.951192014-07-30
286LKQ|1|u5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.11182020-05-06
294V7U|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.11182014-07-09
304U20|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.91192014-07-30
314V7V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.291182014-07-09
324V9C|1|DB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.31192014-07-09
334U1V|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction31192014-07-30
344V52|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.211172014-07-09
355J7L|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction31182016-07-27
364V52|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.211172014-07-09
374V7S|1|BB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.251182014-07-09
385J8A|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.11182016-07-06
394V9D|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction31182014-07-09
404V50|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.221172014-07-09
415JC9|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.031182016-07-06
424V85|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.21182014-07-09
436I7V|1|CB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.91182018-12-05
444V57|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.51172014-07-09
454V64|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.51172014-07-09
464V64|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.51172014-07-09
474V57|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.51172014-07-09
484V54|1|BA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.31172014-07-09
494V54|1|DA5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.31172014-07-09
504V9O|1|GB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.91182014-07-09
514U27|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.81182014-07-30
524WF1|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.091182014-11-05
535J88|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.321182016-07-06
544U25|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.91182014-07-30
554V4Q|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.461172014-07-09
564U1V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction31182014-07-30
574V50|1|BA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.221172014-07-09
584V4Q|1|DA5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.461172014-07-09
594YBB|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.11182015-03-18
604U26|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.81182014-07-30
614U1U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.951182014-07-30
624V9C|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.31182014-07-09
634V7T|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.191172014-07-09
644U20|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.91182014-07-30
655IT8|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.121182016-07-27
664U24|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.91182014-07-30
674WWW|1|YB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.11172014-12-24
685J91|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.961182016-07-06
694V6C|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.191172014-07-09
704V7V|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.291172014-07-09
714V7S|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.251172014-07-09
724V7U|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.11172014-07-09
735J5B|1|DB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.81202016-07-27
744V4H|1|BA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.461172014-07-09
754V4H|1|DA5S ribosomal RNA5S RIBOSOMAL RNAEscherichia coliBacteriaRF00001Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.461172014-07-09
765J5B|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.81182016-07-27
777K00|1|b5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.981192020-09-23
786XZ7|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.11202020-07-22
797ZP8|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S E. coli ribosome with a stalled filamin domain 5 nascent chainElectron microscopy2.21182022-08-10
807LVK|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cfr-modified 50S subunit from Escherichia coliElectron microscopy2.21182021-12-15
816PJ6|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001High resolution cryo-EM structure of E.coli 50SElectron microscopy2.21182020-01-22
827N1P|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.331202021-07-14
837PJS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.351202021-10-20
847Z20|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainElectron microscopy2.291182022-08-10
857O1A|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.41202021-09-01
867S1H|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.351182021-11-17
877S1K|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.421182022-01-19
887BL4|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.41192021-05-12
897N2U|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.531202021-07-14
907S1J|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli ribosome with antibiotic radezolidElectron microscopy2.471182022-03-02
917N2V|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.541202021-07-14
927S1G|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.481182021-11-17
937S1I|1|J5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.481182022-03-02
947SA4|1|45S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Damaged 70S ribosome with PrfH boundElectron microscopy2.551202022-08-03
957UG7|1|55S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.581202022-05-18
966XZB|1|B25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.541202020-11-04
976YSS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.61202020-08-19
986PC6|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 47Electron microscopy2.51182020-06-17
997ZOD|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobiaElectron microscopy2.561182022-08-10
1006PCR|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40oElectron microscopy2.51182020-06-17
1016PC7|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 46Electron microscopy2.51182020-06-17
1026YS3|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideElectron microscopy2.581182020-09-30
1037O1C|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanElectron microscopy2.61202021-09-01
1047N30|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.661202021-07-14
1057NWT|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.661202021-12-15
1067N31|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.691202021-07-14
1076TBV|1|05S15S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.71202020-01-01
1086TC3|1|05S15S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.71202020-01-01
1096XZA|1|B25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.661202020-11-04
1107N2C|1|55S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.721202021-07-14
1116PCQ|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to VM2Electron microscopy2.61182020-06-17
1127ZQ5|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S E. coli ribosome with truncated uL23 and uL24 loopsElectron microscopy2.71182022-08-10
1136PC5|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compounds 46 and VS1Electron microscopy2.71182020-06-17
1147ZQ6|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chainElectron microscopy2.751182022-08-10
1156QDW|1|a5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideElectron microscopy2.831182020-01-15
1167NSO|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.91202021-07-14
1177ST2|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.91202022-02-23
1185AFI|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000012.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.91202015-03-11
1197OT5|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-70 cotranslational folding intermediate 1Electron microscopy2.91202022-01-19
1207B5K|1|B5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.91202021-05-26
1217OTC|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli BL21(DE3)BacteriaRF00001Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BElectron microscopy2.91202022-05-11
1226Y69|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.861202020-07-01
1237O19|1|BB5S ribosomal RNARibosomal RNA 5SEscherichia coli K-12BacteriaRF00001Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanElectron microscopy2.91202021-09-01
1246ORE|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release complex 70SElectron microscopy2.91202019-06-19
1257OIZ|1|bSmall subunit ribosomal RNA fragment16S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptideElectron microscopy2.91192021-09-15
1267P3K|1|b5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)Electron microscopy2.91192021-10-27
1276PCT|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 41qElectron microscopy2.81182020-06-17
1286WYV|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compounds 47 and VS1Electron microscopy2.751182020-06-17
1297TOS|1|5S5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.91202022-05-25
1306U48|1|CB5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.871182019-09-18
1315NWY|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF000012.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.91182017-07-19
1325MDV|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.971202016-12-14
1336ZTP|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy31202020-09-16
1346ZU1|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy31202020-09-16
1356ZTO|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy31202020-09-23
1367OII|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-70 cotranslational folding intermediate 2Electron microscopy31202022-01-19
1377OIF|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 2Electron microscopy31202022-01-19
1387ST6|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy31202022-02-23
1396WDE|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy31202020-07-01
1406PCS|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40eElectron microscopy2.81182020-06-17
1415H5U|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.011202017-01-25
1426WD0|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy31202020-07-01
1436HRM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S d2d8 stapled ribosomeElectron microscopy2.961202018-12-19
1446PC8|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 40qElectron microscopy2.91182020-06-17
1456H4N|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy31202018-09-05
1467NWW|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 1Electron microscopy3.051202022-01-19
1476QUL|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy31202019-04-10
1487AC7|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.081202021-08-18
1496SZS|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.061202019-12-04
1506PCH|1|J5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 50S ribosome bound to compound 21Electron microscopy2.91182020-06-17
1515WFS|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy31202018-05-02
1527NSQ|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.11202021-07-14
1537PJV|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.11202021-10-20
1545MDZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome (empty A site)Electron microscopy3.11202016-12-14
1556S0K|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Ribosome nascent chain in complex with SecAElectron microscopy3.11202019-10-09
1566YSR|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 stalled ribosome complexElectron microscopy3.11202020-08-19
1576X7K|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.11202020-09-02
1587PJY|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.11202021-10-20
1596OM6|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.11202021-02-10
1607NBU|1|b5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.Electron microscopy3.111202022-03-02
1616ENU|1|B5S ribosomal RNA5S Ribosomal RNAEscherichia coliBacteriaRF00001Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.11202017-11-22
1625MDW|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.061202016-12-14
1635MGP|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.11202016-12-14
1646VWL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.11202020-06-03
1657OIG|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001CspA-27 cotranslational folding intermediate 3Electron microscopy3.21202022-01-19
1666X6T|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.21202020-09-02
1677ST7|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.21202022-02-23
1686YST|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.21202020-08-19
1697K53|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.21202021-07-28
1707SSO|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.21202022-02-23
1717LV0|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.21202021-07-28
1727SSN|1|25S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.21202022-02-23
1737K54|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.21202021-07-28
1747ACJ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.21202021-08-18
1756ENF|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.21202017-11-22
1766WDD|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.21202020-07-01
1775U9G|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.21192017-03-22
1785U9F|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF000013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.21192017-03-22
1795UYM|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.21202017-06-07
1806C4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.241202018-02-21
1817ABZ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.211182021-08-18
1825WDT|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy31202018-04-25
1837JT1|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF0000170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.31202020-11-11
1846WDF|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.31202020-07-01
1857K55|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.31202021-07-28
1867SSD|1|25S ribosomal RNA5S RNAEscherichia coli K-12BacteriaRF00001Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.31202022-02-23
1876WDG|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.31202020-07-01
1887CPJ|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001ycbZ-stalled 70S ribosomeElectron microscopy3.31202021-12-08
1896OG7|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.31202019-09-25
1906WD1|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.31202020-07-01
1917BV8|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Mature 50S ribosomal subunit from RrmJ knock out E.coli strainElectron microscopy3.141202020-07-01
1925WE4|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.11202018-04-25
1937BL5|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli str. K-12 substr. MG1655BacteriaRF00001pre-50S-ObgE particleElectron microscopy3.31192021-05-12
1946OFX|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Non-rotated ribosome (Structure I)Electron microscopy3.31202019-09-25
1957K50|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.41202021-07-28
1967K52|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.41202021-07-28
1973JBV|1|a5S ribosomal RNARNA (118-MER)Escherichia coliBacteriaRF00001Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.321172016-01-27
1985GAE|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001RNC in complex with a translocating SecYEGElectron microscopy3.331202016-01-27
1996I0Y|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.21182018-12-05
2007QGN|1|O5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeElectron microscopy3.371182022-04-27
2017ACR|1|35S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Structure of post-translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.441202021-08-18
2025MDY|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.351202016-12-21
2035WFK|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.41202018-05-02
2045LZD|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.41202016-11-23
2056OGI|1|25S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.41202019-09-25
2063JCE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.21182016-01-13
2076ZTM|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.31202020-09-16
2085O2R|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.41202017-07-26
2096ZTJ|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.41202020-09-16
2107NSP|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.51202021-08-11
2116X7F|1|d5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.51202020-09-02
2127JT2|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF0000170S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.51202020-11-11
2137K51|1|25S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.51202021-07-28
2145LZE|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.51202016-11-23
2156BU8|1|025S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.51202018-01-31
2167OJ0|1|b5S ribosomal RNA5S rRNAEscherichia coli K-12BacteriaRF00001Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2Electron microscopy3.51192021-09-15
2177D6Z|1|B5S ribosomal RNA5S ribosomal rRNAEscherichia coliBacteriaRF00001Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.41182021-04-07
2186VWM|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.41202020-06-03
2196OSQ|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.51202019-06-26
2206VWN|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF0000170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.41202020-06-03
2215U4I|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.51182017-01-11
2226ORL|1|35S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.51202019-06-19
2235WE6|1|B5S ribosomal RNA5S rRNAEscherichia coliBacteriaRF0000170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.41202018-04-25
2245IQR|1|35S ribosomal RNA5S rRNAEscherichia coliBacteriaRF00001Structure of RelA bound to the 70S ribosomeElectron microscopy31182016-05-04
2257BL3|1|B5S ribosomal RNA5S ribosomal RNAEscherichia coli K-12BacteriaRF00001pre-50S-ObgE particle state 2Electron microscopy3.51192021-05-12
2266ZTL|1|BB5S ribosomal RNA5S ribosomal RNAEscherichia coliBacteriaRF00001E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.51202020-09-16

Release history

Release3.243
Date2022-08-10

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_10157.97NR_3.5_10157.963.243(221) 3JBV|1|a, 3JCE|1|B, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V54|1|BA, 4V54|1|DA, 4V57|1|BA, 4V57|1|DA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V85|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAE|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYM|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6C4I|1|B, 6ENF|1|B, 6ENU|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6LKQ|1|u, 6OFX|1|2, 6OG7|1|2, 6OGI|1|2, 6OM6|1|3, 6ORE|1|3, 6ORL|1|3, 6OSQ|1|3, 6PC5|1|J, 6PC6|1|J, 6PC7|1|J, 6PC8|1|J, 6PCH|1|J, 6PCQ|1|J, 6PCR|1|J, 6PCS|1|J, 6PCT|1|J, 6PJ6|1|J, 6QDW|1|a, 6QUL|1|B, 6S0K|1|B, 6SZS|1|B, 6TBV|1|05S1, 6TC3|1|05S1, 6U48|1|CB, 6VWL|1|3, 6VWM|1|3, 6VWN|1|3, 6WD0|1|2, 6WD1|1|2, 6WDD|1|2, 6WDE|1|2, 6WDF|1|2, 6WDG|1|2, 6WYV|1|J, 6X6T|1|d, 6X7F|1|d, 6X7K|1|d, 6XZ7|1|B, 6XZA|1|B2, 6XZB|1|B2, 6Y69|1|B, 6YS3|1|a, 6YSR|1|B, 6YSS|1|B, 6YST|1|B, 6ZTJ|1|BB, 6ZTL|1|BB, 6ZTM|1|BB, 6ZTO|1|BB, 6ZTP|1|BB, 6ZU1|1|BB, 7ABZ|1|3, 7AC7|1|3, 7ACJ|1|3, 7ACR|1|3, 7B5K|1|B, 7BL3|1|B, 7BL4|1|B, 7BL5|1|B, 7BV8|1|B, 7CPJ|1|B, 7D6Z|1|B, 7JT1|1|2, 7JT2|1|2, 7K00|1|b, 7K50|1|2, 7K51|1|2, 7K52|1|2, 7K53|1|2, 7K54|1|2, 7K55|1|2, 7LV0|1|2, 7LVK|1|J, 7N1P|1|5, 7N2C|1|5, 7N2U|1|5, 7N2V|1|5, 7N30|1|5, 7N31|1|5, 7NBU|1|b, 7NSO|1|B, 7NSP|1|B, 7NSQ|1|B, 7NWT|1|3, 7NWW|1|3, 7O19|1|BB, 7O1A|1|BB, 7O1C|1|BB, 7OIF|1|3, 7OIG|1|3, 7OII|1|3, 7OIZ|1|b, 7OJ0|1|b, 7OT5|1|3, 7OTC|1|B, 7P3K|1|b, 7PJS|1|B, 7PJV|1|B, 7PJY|1|B, 7QGN|1|O, 7S1G|1|J, 7S1H|1|J, 7S1I|1|J, 7S1J|1|J, 7S1K|1|J, 7SA4|1|4, 7SSD|1|2, 7SSN|1|2, 7SSO|1|2, 7ST2|1|2, 7ST6|1|2, 7ST7|1|2, 7TOS|1|5S, 7UG7|1|5(5) 7Z20|1|a, 7ZOD|1|a, 7ZP8|1|a, 7ZQ5|1|a, 7ZQ6|1|a(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_10157.97NR_3.5_10157.983.244(226) 3JBV|1|a, 3JCE|1|B, 4U1U|1|BB, 4U1U|1|DB, 4U1V|1|BB, 4U1V|1|DB, 4U20|1|BB, 4U20|1|DB, 4U24|1|BB, 4U24|1|DB, 4U25|1|BB, 4U25|1|DB, 4U26|1|BB, 4U26|1|DB, 4U27|1|BB, 4U27|1|DB, 4V4H|1|BA, 4V4H|1|DA, 4V4Q|1|BA, 4V4Q|1|DA, 4V50|1|BA, 4V50|1|DA, 4V52|1|BA, 4V52|1|DA, 4V54|1|BA, 4V54|1|DA, 4V57|1|BA, 4V57|1|DA, 4V64|1|BA, 4V64|1|DA, 4V6C|1|BB, 4V6C|1|DB, 4V7S|1|BB, 4V7S|1|DB, 4V7T|1|BB, 4V7T|1|DB, 4V7U|1|BB, 4V7U|1|DB, 4V7V|1|BB, 4V7V|1|DB, 4V85|1|BB, 4V9C|1|BB, 4V9C|1|DB, 4V9D|1|CB, 4V9D|1|DB, 4V9O|1|AB, 4V9O|1|CB, 4V9O|1|EB, 4V9O|1|GB, 4V9P|1|AB, 4V9P|1|CB, 4V9P|1|EB, 4V9P|1|GB, 4WF1|1|BB, 4WF1|1|DB, 4WOI|1|BB, 4WOI|1|CB, 4WWW|1|RB, 4WWW|1|YB, 4YBB|1|CB, 4YBB|1|DB, 5AFI|1|B, 5GAE|1|B, 5H5U|1|B, 5IQR|1|3, 5IT8|1|CB, 5IT8|1|DB, 5J5B|1|CB, 5J5B|1|DB, 5J7L|1|CB, 5J7L|1|DB, 5J88|1|CB, 5J88|1|DB, 5J8A|1|CB, 5J8A|1|DB, 5J91|1|CB, 5J91|1|DB, 5JC9|1|CB, 5JC9|1|DB, 5LZD|1|B, 5LZE|1|B, 5MDV|1|3, 5MDW|1|3, 5MDY|1|3, 5MDZ|1|3, 5MGP|1|B, 5NWY|1|O, 5O2R|1|B, 5U4I|1|B, 5U9F|1|02, 5U9G|1|02, 5UYM|1|02, 5WDT|1|B, 5WE4|1|B, 5WE6|1|B, 5WFK|1|B, 5WFS|1|B, 6BU8|1|02, 6C4I|1|B, 6ENF|1|B, 6ENU|1|B, 6H4N|1|B, 6HRM|1|3, 6I0Y|1|B, 6I7V|1|CB, 6I7V|1|DB, 6LKQ|1|u, 6OFX|1|2, 6OG7|1|2, 6OGI|1|2, 6OM6|1|3, 6ORE|1|3, 6ORL|1|3, 6OSQ|1|3, 6PC5|1|J, 6PC6|1|J, 6PC7|1|J, 6PC8|1|J, 6PCH|1|J, 6PCQ|1|J, 6PCR|1|J, 6PCS|1|J, 6PCT|1|J, 6PJ6|1|J, 6QDW|1|a, 6QUL|1|B, 6S0K|1|B, 6SZS|1|B, 6TBV|1|05S1, 6TC3|1|05S1, 6U48|1|CB, 6VWL|1|3, 6VWM|1|3, 6VWN|1|3, 6WD0|1|2, 6WD1|1|2, 6WDD|1|2, 6WDE|1|2, 6WDF|1|2, 6WDG|1|2, 6WYV|1|J, 6X6T|1|d, 6X7F|1|d, 6X7K|1|d, 6XZ7|1|B, 6XZA|1|B2, 6XZB|1|B2, 6Y69|1|B, 6YS3|1|a, 6YSR|1|B, 6YSS|1|B, 6YST|1|B, 6ZTJ|1|BB, 6ZTL|1|BB, 6ZTM|1|BB, 6ZTO|1|BB, 6ZTP|1|BB, 6ZU1|1|BB, 7ABZ|1|3, 7AC7|1|3, 7ACJ|1|3, 7ACR|1|3, 7B5K|1|B, 7BL3|1|B, 7BL4|1|B, 7BL5|1|B, 7BV8|1|B, 7CPJ|1|B, 7D6Z|1|B, 7JT1|1|2, 7JT2|1|2, 7K00|1|b, 7K50|1|2, 7K51|1|2, 7K52|1|2, 7K53|1|2, 7K54|1|2, 7K55|1|2, 7LV0|1|2, 7LVK|1|J, 7N1P|1|5, 7N2C|1|5, 7N2U|1|5, 7N2V|1|5, 7N30|1|5, 7N31|1|5, 7NBU|1|b, 7NSO|1|B, 7NSP|1|B, 7NSQ|1|B, 7NWT|1|3, 7NWW|1|3, 7O19|1|BB, 7O1A|1|BB, 7O1C|1|BB, 7OIF|1|3, 7OIG|1|3, 7OII|1|3, 7OIZ|1|b, 7OJ0|1|b, 7OT5|1|3, 7OTC|1|B, 7P3K|1|b, 7PJS|1|B, 7PJV|1|B, 7PJY|1|B, 7QGN|1|O, 7S1G|1|J, 7S1H|1|J, 7S1I|1|J, 7S1J|1|J, 7S1K|1|J, 7SA4|1|4, 7SSD|1|2, 7SSN|1|2, 7SSO|1|2, 7ST2|1|2, 7ST6|1|2, 7ST7|1|2, 7TOS|1|5S, 7UG7|1|5, 7Z20|1|a, 7ZOD|1|a, 7ZP8|1|a, 7ZQ5|1|a, 7ZQ6|1|a(0) (0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
17BL5|1|Bpre-50S-ObgE particleELECTRON MICROSCOPY3.3119
26VWN|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.4120
36VWM|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.4120
46VWL|1|370S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.1120
57ABZ|1|3Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.21118
66OM6|1|3Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.1120
74V9P|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
84V9O|1|GBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
95U4I|1|BStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.5118
106ORL|1|3RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.5120
117BL3|1|Bpre-50S-ObgE particle state 2ELECTRON MICROSCOPY3.5119
123JCE|1|BStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.2118
137ACR|1|3Structure of post-translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.44120
147ACJ|1|3Structure of translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.2120
157JT1|1|270S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.3120
167JT2|1|270S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.5120
176OFX|1|2Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.3120
186OG7|1|270S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.3120
196OGI|1|270S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.4120
205GAE|1|BRNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.33120
217PJV|1|BStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.1120
227PJY|1|BStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.1120
237PJS|1|BStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.35120
246YSS|1|BStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.6120
256YSR|1|BStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.1120
266YST|1|BStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.2120
276I7V|1|DBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9119
284YBB|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1120
295J5B|1|DBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8120
305J91|1|DBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96120
315J8A|1|DBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1120
325J7L|1|DBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3120
335JC9|1|DBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03120
345IT8|1|DBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12120
355J88|1|DBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32120
364WOI|1|BB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3119
374V9C|1|DBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3119
384V9D|1|CBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3119
394U1U|1|BBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95119
404U20|1|BBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9119
414WF1|1|BBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09119
424U25|1|BBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9119
434U27|1|BBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8119
444U26|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8119
454U24|1|BBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9119
464U1V|1|BBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3119
474V7U|1|BBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1118
484V7V|1|BBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29118
494V7T|1|BBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19118
504V6C|1|BBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19118
514V7S|1|BBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25118
524WWW|1|RBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1118
534V85|1|BBCrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.2118
546LKQ|1|uThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.1118
554V9P|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
564V9O|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
574V9O|1|ABControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
586I0Y|1|BTnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.2118
594V9P|1|CBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
604V9O|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
614V9P|1|EBControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.9118
624V9D|1|DBStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION3118
634WF1|1|DBCrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.09118
644U1U|1|DBCrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.95118
654U20|1|DBCrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.9118
664U1V|1|DBCrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION3118
674U27|1|DBCrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.8118
684U25|1|DBCrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.9118
694U24|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.9118
704U26|1|DBCrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.8118
714YBB|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.1118
725J88|1|CBStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.32118
735IT8|1|CBHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.12118
745J5B|1|CBStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.8118
755J91|1|CBStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.96118
765J8A|1|CBStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.1118
775J7L|1|CBStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION3118
785JC9|1|CBStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.03118
796PJ6|1|JHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.2118
807LVK|1|JCfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.2118
815IQR|1|3Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY3118
827SA4|1|4Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.55120
836C4I|1|BConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.24120
845MDV|1|3Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.97120
856X7F|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.5120
866X7K|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.1120
876X6T|1|dCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.2120
885MDZ|1|3Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.1120
895MDW|1|3Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.06120
905MDY|1|3Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.35120
915NWY|1|O2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.9118
927QGN|1|OStructure of the SmrB-bound E. coli disome - stalled 70S ribosomeELECTRON MICROSCOPY3.37118
936ORE|1|3Release complex 70SELECTRON MICROSCOPY2.9120
947OII|1|3CspA-70 cotranslational folding intermediate 2ELECTRON MICROSCOPY3120
957OIF|1|3CspA-27 cotranslational folding intermediate 2ELECTRON MICROSCOPY3120
967NWW|1|3CspA-27 cotranslational folding intermediate 1ELECTRON MICROSCOPY3.05120
977OIG|1|3CspA-27 cotranslational folding intermediate 3ELECTRON MICROSCOPY3.2120
987OT5|1|3CspA-70 cotranslational folding intermediate 1ELECTRON MICROSCOPY2.9120
996HRM|1|3E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.96120
1007D6Z|1|BMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.4118
1017NWT|1|3Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.66120
1027ZQ6|1|a70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.75118
1037S1I|1|JWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.48118
1047S1G|1|Jwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.48118
1057S1H|1|JWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.35118
1067S1K|1|JCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.42118
1077S1J|1|JWild-type Escherichia coli ribosome with antibiotic radezolidELECTRON MICROSCOPY2.47118
1086OSQ|1|3RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.5120
1096WYV|1|JE. coli 50S ribosome bound to compounds 47 and VS1ELECTRON MICROSCOPY2.75118
1106PC8|1|JE. coli 50S ribosome bound to compound 40qELECTRON MICROSCOPY2.9118
1116PC7|1|JE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.5118
1126PCT|1|JE. coli 50S ribosome bound to compound 41qELECTRON MICROSCOPY2.8118
1136PCQ|1|JE. coli 50S ribosome bound to VM2ELECTRON MICROSCOPY2.6118
1146PCS|1|JE. coli 50S ribosome bound to compound 40eELECTRON MICROSCOPY2.8118
1156PCR|1|JE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.5118
1166PC5|1|JE. coli 50S ribosome bound to compounds 46 and VS1ELECTRON MICROSCOPY2.7118
1176PC6|1|JE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.5118
1186PCH|1|JE. coli 50S ribosome bound to compound 21ELECTRON MICROSCOPY2.9118
1197BL4|1|Bin vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.4119
1207AC7|1|3Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.08120
1216U48|1|CBE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.87118
1227BV8|1|BMature 50S ribosomal subunit from RrmJ knock out E.coli strainELECTRON MICROSCOPY3.14120
1236SZS|1|BRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.06120
1247NSQ|1|BStructure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.1120
1257NSO|1|BStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.9120
1267NSP|1|BStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.5120
1276ZTL|1|BBE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.5120
1285LZD|1|BStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.4120
1296TBV|1|05S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.7120
1306TC3|1|05S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.7120
1317O1A|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.4120
1327O19|1|BBCryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.9120
1337O1C|1|BBCryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.6120
1347B5K|1|BE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.9120
1355H5U|1|BMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.01120
1367OIZ|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptideELECTRON MICROSCOPY2.9119
1377P3K|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptide (control)ELECTRON MICROSCOPY2.9119
1387OJ0|1|bCryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2ELECTRON MICROSCOPY3.5119
1397K00|1|bStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.98119
1407N2C|1|5Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.72120
1417N2V|1|5Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.54120
1427N2U|1|5Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.53120
1437N31|1|5Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.69120
1447N1P|1|5Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.33120
1457OTC|1|BCryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BELECTRON MICROSCOPY2.9120
1466ZTM|1|BBE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.3120
1476ZTJ|1|BBE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.4120
1486ZU1|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY3120
1496ZTO|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY3120
1506ZTP|1|BBE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY3120
1516XZB|1|B2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.54120
1526XZA|1|B2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.66120
1536XZ7|1|BE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.1120
1546S0K|1|BRibosome nascent chain in complex with SecAELECTRON MICROSCOPY3.1120
1556QUL|1|BStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY3120
1567UG7|1|570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.58120
1577N30|1|5Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.66120
1585O2R|1|BCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.4120
1595WE4|1|B70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.1120
1605WDT|1|B70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY3120
1615WFK|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.4120
1625WE6|1|B70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.4120
1635WFS|1|B70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY3120
1647NBU|1|bStructure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.ELECTRON MICROSCOPY3.11120
1655AFI|1|B2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.9120
1665MGP|1|BStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.1120
1677ST2|1|2Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.9120
1685LZE|1|BStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.5120
1696H4N|1|BStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY3120
1706Y69|1|BCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.86120
1716ENU|1|BPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.1120
1726ENF|1|BCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.2120
1737CPJ|1|BycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.3120
1747TOS|1|5SE. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.9120
1755UYM|1|0270S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.2120
1766WDD|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.2120
1776WDE|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY3120
1786WDF|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.3120
1796WDG|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.3120
1806WD1|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.3120
1816WD0|1|2Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY3120
1826BU8|1|0270S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.5120
1837K55|1|2Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.3120
1847K52|1|2Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.4120
1857K54|1|2Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.2120
1867K53|1|2Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.2120
1877LV0|1|2Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.2120
1887ST6|1|2Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY3120
1897K50|1|2Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.4120
1907K51|1|2Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.5120
1917SSD|1|2Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.3120
1925U9G|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.2119
1935U9F|1|023.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.2119
1947ST7|1|2Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.2120
1957SSN|1|2Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.2120
1967SSO|1|2Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.2120
1974WOI|1|CB4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION3118
1984V9C|1|BBAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.3118
1996I7V|1|CBRibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.9118
2004WWW|1|YBCrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.1117
2014V7S|1|DBCrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.25117
2024V6C|1|DBCrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.19117
2034V7T|1|DBCrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.19117
2044V7V|1|DBCrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.29117
2054V7U|1|DBCrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.1117
2067Z20|1|a70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.29118
2077ZP8|1|a70S E. coli ribosome with a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.2118
2087ZQ5|1|a70S E. coli ribosome with truncated uL23 and uL24 loopsELECTRON MICROSCOPY2.7118
2097ZOD|1|a70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobiaELECTRON MICROSCOPY2.56118
2103JBV|1|aMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.32117
2116YS3|1|aCryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.58118
2126QDW|1|aCryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.83118
2134V4Q|1|DACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117
2144V4H|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
2154V54|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
2164V64|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
2174V52|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
2184V57|1|DACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
2194V57|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.5117
2204V52|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.21117
2214V64|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.5117
2224V54|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.3117
2234V50|1|BACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
2244V50|1|DACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.22117
2254V4H|1|BACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.46117
2264V4Q|1|BACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.46117

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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