#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16D9J|1|7 (rep)5S ribosomal RNA5S rRNAOryctolagus cuniculusEukaryaRF00001Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.Electron microscopy3.22018-06-06
25LZS|1|75S ribosomal RNA5S ribosomal RNAOryctolagus cuniculusEukaryaRF00001Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin BElectron microscopy3.312016-11-30
35LZV|1|75S ribosomal RNA5S ribosomal RNAOryctolagus cuniculusEukaryaRF00001Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.Electron microscopy3.352016-11-30
43J72|1|75S ribosomal RNAStructure of the idle mammalian ribosome-Sec61 complexElectron microscopy3.42014-06-18
53J71|1|75S ribosomal RNAStructure of the mammalian 60S ribosomal subunitElectron microscopy3.42014-06-18
63J74|1|75S ribosomal RNAStructure of the 80S mammalian ribosome bound to eEF2Electron microscopy3.52014-06-18
75LZZ|1|75S ribosomal RNA5S ribosomal RNAOryctolagus cuniculusEukaryaRF00001Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)Electron microscopy3.472016-11-30
86D90|1|75S ribosomal RNA5S rRNAOryctolagus cuniculusEukaryaRF00001Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.Electron microscopy3.22018-06-06
93JAH|1|75S ribosomal RNA5S ribosomal RNAOryctolagus cuniculusEukaryaRF00001Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codonElectron microscopy3.452015-08-12
101VWY|1|75S ribosomal RNAStructure of the idle mammalian ribosome-Sec61 complex. This entry contains the large subunit ribosomal RNA.Electron microscopy3.42014-06-18
111VWW|1|75S ribosomal RNAStructure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.Electron microscopy3.42014-06-18
121VX3|1|75S ribosomal RNAStructure of the 80S mammalian ribosome bound to eEF2. This entry contains the large subunit ribosomal RNA.Electron microscopy3.52014-06-18

Release history

Release3.253.263.273.283.293.303.313.323.333.343.353.363.373.383.393.403.413.423.43
Date2018-06-082018-06-152018-06-222018-06-292018-07-062018-07-132018-07-202018-07-272018-08-032018-08-102018-08-172018-08-242018-08-312018-09-072018-09-142018-09-212018-09-282018-10-052018-10-12

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_10255.5NR_3.5_10255.43.25(10) 1VWW|1|7, 1VWY|1|7, 1VX3|1|7, 3J71|1|7, 3J72|1|7, 3J74|1|7, 3JAH|1|7, 5LZS|1|7, 5LZV|1|7, 5LZZ|1|7(2) 6D90|1|7, 6D9J|1|7(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_10255.5NR_3.5_10255.63.44(12) 1VWW|1|7, 1VWY|1|7, 1VX3|1|7, 3J71|1|7, 3J72|1|7, 3J74|1|7, 3JAH|1|7, 5LZS|1|7, 5LZV|1|7, 5LZZ|1|7, 6D90|1|7, 6D9J|1|7(0) (0)

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16D9J|1|7Mammalian 80S ribosome with a double translocated CrPV-IRES, P-sitetRNA and eRF1.ELECTRON MICROSCOPY3.2119
21VX3|1|7Structure of the 80S mammalian ribosome bound to eEF2. This entry contains the large subunit ribosomal RNA.ELECTRON MICROSCOPY3.5120
33J74|1|7Structure of the 80S mammalian ribosome bound to eEF2ELECTRON MICROSCOPY3.5120
43J71|1|7Structure of the mammalian 60S ribosomal subunitELECTRON MICROSCOPY3.4120
51VWW|1|7Structure of the mammalian 60S ribosomal subunit. This entry contains the large subunit ribosomal RNA.ELECTRON MICROSCOPY3.4120
63J72|1|7Structure of the idle mammalian ribosome-Sec61 complexELECTRON MICROSCOPY3.4120
71VWY|1|7Structure of the idle mammalian ribosome-Sec61 complex. This entry contains the large subunit ribosomal RNA.ELECTRON MICROSCOPY3.4120
86D90|1|7Mammalian 80S ribosome with a double translocated CrPV-IRES, P-site tRNA and eRF1.ELECTRON MICROSCOPY3.2119
95LZV|1|7Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.ELECTRON MICROSCOPY3.35120
105LZS|1|7Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin BELECTRON MICROSCOPY3.31119
115LZZ|1|7Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)ELECTRON MICROSCOPY3.47120
123JAH|1|7Structure of a mammalian ribosomal termination complex with ABCE1, eRF1(AAQ), and the UAG stop codonELECTRON MICROSCOPY3.45120

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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