#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
14YCO|1|D (rep)Transfer RNAtRNApheEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-ray diffraction2.12015-04-22
24YCO|1|ETransfer RNAtRNApheEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-ray diffraction2.12015-04-22
34YCO|1|FTransfer RNAtRNApheEscherichia coliBacteriaRF00005E. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-ray diffraction2.12015-04-22
43FOZ|1|CtRNA(Phe)Structure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-ray diffraction2.52009-01-20
54WOI|1|DWTransfer RNAMessenger RNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF000054,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
65NDK|1|X1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
74V9H|1|AVTransfer RNAmRNA, PE hybrid state tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-ray diffraction2.862014-07-09
83L0U|1|ATransfer RNAUnmodified tRNAPheEscherichia coliBacteriaRF00005The crystal structure of unmodified tRNAPhe from Escherichia coliX-ray diffraction32010-03-16
92ZM5|1|CTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-ray diffraction2.552009-04-14
105NDK|1|X4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
114V5R|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
124V9D|1|BVTransfer RNAmessenger RNA, phenylalanine specific transfer RNAEscherichia coliBacteriaRF00005Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
136QNR|1|2KTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
144V5R|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
154V5P|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
164V5P|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
172ZXU|1|CTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-ray diffraction2.752009-05-26
187AZO|1|PSIBTransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
194V6F|1|CCTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
205NDJ|1|X1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.152018-05-02
218UD8|1|1yTransfer RNAA- and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.62024-02-21
228UD7|1|1wTransfer RNAA- and E-site Deacylated tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.552024-02-21
237AZO|1|PSIATransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
246QNR|1|2LTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
255NDJ|1|X4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.152018-05-02
264WQU|1|BWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
274V5S|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
288G2C|1|1wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.652023-12-27
294W2E|1|wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92014-10-01
308UD7|1|1yTransfer RNAA- and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.552024-02-21
314V5Q|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
328UD8|1|1wTransfer RNAA- and E-site Deacylated tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.62024-02-21
334WQF|1|BWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
344V5S|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
354V5E|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
368G2B|1|1wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.552023-12-27
378G2C|1|2wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.652023-12-27
385J4B|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
396C5L|1|AVTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases), mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.22018-02-21
406CFJ|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82018-03-07
414V5E|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
427RQ8|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.52021-10-13
435W4K|1|1yTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
448UD6|1|1yTransfer RNAA- and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.72024-02-21
458UD8|1|2yTransfer RNAA- and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.62024-02-21
468G2B|1|1yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.552023-12-27
474V5J|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
484V5Q|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
496XHY|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
505WIT|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
516C5L|1|CVTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases), mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.22018-02-21
528UD8|1|2wTransfer RNAA- and E-site Deacylated tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.62024-02-21
538G2A|1|1wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.452023-12-27
546CFJ|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82018-03-07
558G2B|1|2wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.552023-12-27
566CFJ|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82018-03-07
578G29|1|1wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.552023-12-27
588EV7|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.892023-08-09
595J4C|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
605WIS|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
615J4C|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
628UD6|1|1wTransfer RNAA- and E-site Deacylated tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.72024-02-21
634V6F|1|BCTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
646Y3G|1|FTransfer RNARNA (75-MER)Escherichia coliBacteriaRF00005Crystal structure of phenylalanine tRNA from Escherichia coliX-ray diffraction3.12020-12-30
654WQU|1|DWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
668EV7|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.892023-08-09
674V5D|1|CVTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
688UD7|1|2wTransfer RNAA- and E-site Deacylated tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.552024-02-21
696XHW|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
708UD7|1|2yTransfer RNAA- and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.552024-02-21
714V5D|1|AVTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
728CVK|1|1wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.52022-10-19
738G29|1|2wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.552023-12-27
746CFJ|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82018-03-07
755WIS|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
767AZS|1|PSIATransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
774WT1|1|1KTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
785J4B|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
795VP2|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82017-06-28
806XHV|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
815NDK|1|W1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
826XHY|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
837AZS|1|PSIBTransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
845J4C|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
855J4B|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
868G2B|1|2yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.552023-12-27
874WQF|1|DWTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
884V51|1|AWTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
894WT1|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
904V5J|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES), MRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
918G2A|1|2wTransfer RNAA-site Aminoacylated Phe-tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.452023-12-27
924V9C|1|AVTransfer RNAMessenger RNA, mRNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF00005Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
935J4B|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
947RQ9|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.62021-10-13
958UD6|1|2yTransfer RNAA- and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.72024-02-21
967AZO|1|ESIBTransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
975J4C|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
985W4K|1|1wTransfer RNAmRNA, tRNA, A-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
995VP2|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82017-06-28
1007RQ8|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.52021-10-13
1018CVJ|1|1wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.42022-10-19
1026ND5|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
1035NDK|1|W4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
1044WOI|1|AXTransfer RNAMessenger RNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF000054,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
1058G2D|1|1wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.72023-12-27
1064W2G|1|AWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
1074WQR|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1086XHW|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
1097AZO|1|ESIATransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
1108G2D|1|1yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.72023-12-27
1115WIS|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
1125WIT|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
1138EV6|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.9462023-08-09
1146XHV|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
1158CVK|1|2wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.52022-10-19
1165DOY|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
1175W4K|1|2yTransfer RNAtRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
1182ZM5|1|DTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-ray diffraction2.552009-04-14
1198CVL|1|1wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.32022-10-19
1207RQ9|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.62021-10-13
1218EV7|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.892023-08-09
1224Y4P|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1234V9D|1|AVTransfer RNAmessenger RNA, phenylalanine specific transfer RNAEscherichia coliBacteriaRF00005Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
1247RQ9|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.62021-10-13
1254Z3S|1|1yTransfer RNAA/E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
1268UD6|1|2wTransfer RNAA- and E-site Deacylated tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.72024-02-21
1274WSD|1|1KTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1287RQ8|1|1wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.52021-10-13
1295DOY|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
1308CVJ|1|2wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.42022-10-19
1314WT1|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1328EV7|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.892023-08-09
1334V5S|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1345VP2|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82017-06-28
1355DOY|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
1366ND5|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
1374V51|1|CWTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1384W2I|1|AWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
1398CVL|1|2wTransfer RNAA-site Aminoacyl-tRNA Phe-NH-tRNAphe, MF-mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.32022-10-19
1408G2D|1|2yTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.72023-12-27
1414WSD|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1424W2I|1|CWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
1434V6F|1|BDTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
1444Z3S|1|2yTransfer RNAA/E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
1454Z3S|1|1wTransfer RNAA/E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
1465W4K|1|2wTransfer RNAmRNA, tRNA, A-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
1474WQR|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1481VY4|1|AWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1494V5S|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
1506ND5|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
1514WPO|1|BYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
1524Y4P|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1538EV6|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.9462023-08-09
1547AZO|1|ASIBTransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
1557RQ9|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.62021-10-13
1564WRO|1|1KTransfer RNARNA (30-MER), tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1578EV6|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.9462023-08-09
1584W2G|1|CWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
1596UO1|1|2yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1604V5D|1|CWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
1616UO1|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1624V5L|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.12014-07-09
1634W2I|1|AYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
1644WSD|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
1654V5D|1|AWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
1664W2F|1|AWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
1674Y4P|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1684Z3S|1|2wTransfer RNAA/E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
1695NDJ|1|W1Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.152018-05-02
1705VP2|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82017-06-28
1716UO1|1|1yTransfer RNAA-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1724WT1|1|1LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1734W2I|1|CYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
1741VY4|1|AYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1758G2D|1|2wTransfer RNAA-site and E-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.72023-12-27
1764V5D|1|AYTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
1774V5E|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
1786QNR|1|1KTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
1794WZO|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1805NDJ|1|W4Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.152018-05-02
1817AZO|1|ASIATransfer RNAPhe-tRNA, RNA (30-MER)Escherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
1824WPO|1|DYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
1834W2G|1|AYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
1844V5J|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
1856XHY|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
1866UO1|1|1wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1875WIS|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
1884V5D|1|CYTransfer RNAMRNA, P AND A-SITE PHE-TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-ray diffraction3.52014-07-09
1896QNR|1|3LTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
1904V5J|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Structure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-ray diffraction3.12014-07-09
1912ZXU|1|DTransfer RNAtRNA(Phe)Escherichia coliBacteriaRF00005Crystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-ray diffraction2.752009-05-26
1924V5Q|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
1934V5Q|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
1946QNR|1|1LTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
1957RQ8|1|2wTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.52021-10-13
1964WQR|1|1KTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
1975NDK|1|V4Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
1984W2G|1|CYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
1998EV6|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.9462023-08-09
2004V6F|1|CDTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
2018G2C|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.652023-12-27
2025WIT|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
2035NDJ|1|V4Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.152018-05-02
2046QNR|1|5KTransfer RNAE. coli tRNAPheEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
2054WZO|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
2066ND5|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
2076QNR|1|3KTransfer RNAE. coli tRNAPhe, mRNAEscherichia coliBacteriaRF0000570S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-ray diffraction3.12019-06-19
2081VY7|1|AYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
2094W2F|1|AYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
2104Y4P|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
2115DOY|1|2wTransfer RNAA-site and E-site tRNAs, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
2126C5L|1|CWTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases)Escherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.22018-02-21
2136C5L|1|AWTransfer RNAE-site tRNA PHE OR P-site tRNA PHE (unmodified bases)Escherichia coliBacteriaRF00005Conformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-ray diffraction3.22018-02-21
2141VY5|1|AWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
2151VY4|1|CYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
2164V6F|1|CBTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
2175WIT|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
2188G2A|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.452023-12-27
2194WSD|1|1LTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
2204WRO|1|3LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
2215NDK|1|V1Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-ray diffraction2.952017-12-13
2224V5C|1|AWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
2234W2F|1|CWTransfer RNAA/P-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
2246XHV|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
2254WRO|1|1LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
2264V5P|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
2278G29|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.552023-12-27
2286XHY|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
2298G2C|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.652023-12-27
2304W2F|1|CYTransfer RNAA/P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
2314V5R|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
2326XHW|1|1yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
2334V5C|1|CYTransfer RNAA-SITE PHE-TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
2344WPO|1|BWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
2358G2A|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.452023-12-27
2367AZS|1|ASIBTransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
2374WRO|1|3KTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
2387AZS|1|ESIATransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
2394V5R|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-ray diffraction3.12014-07-09
2404V5C|1|AYTransfer RNAA-SITE PHE-TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
2417AZS|1|ESIBTransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
2424V6F|1|BBTransfer RNAMRNA, TRNA-PHE WITH UNMODIFIED NUCLEOTIDES EXCEPT FOR MIA37Escherichia coliBacteriaRF00005Elongation complex of the 70S ribosome with three tRNAs and mRNA.X-ray diffraction3.12014-07-09
2431VY7|1|CYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
2444V5P|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-ray diffraction3.12014-07-09
2458CVJ|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.42022-10-19
2465NDJ|1|V1Transfer RNAtRNA-PheEscherichia coliBacteriaRF00005Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-ray diffraction3.152018-05-02
2471VY5|1|AYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
2486XHW|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
2498G29|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.552023-12-27
2501VY4|1|CWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
2517AZS|1|ASIATransfer RNAmRNA, Phe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
2524V5E|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Insights into translational termination from the structure of RF2 bound to the ribosomeX-ray diffraction3.452014-07-09
2537LH5|1|CWTransfer RNAE-Site tRNA Phe and A-site tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.272021-06-02
2548CVJ|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.42022-10-19
2556UCQ|1|1yTransfer RNAP-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.52019-12-25
2566XHV|1|2yTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
2577LH5|1|AWTransfer RNAE-Site tRNA Phe and A-site tRNA PheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.272021-06-02
2587AZO|1|TRNATransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-ray diffraction3.32022-06-01
2598CVK|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.52022-10-19
2607AZS|1|TRNATransfer RNAPhe-tRNAEscherichia coliBacteriaRF0000570S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-ray diffraction3.12022-06-08
2618CVK|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.52022-10-19
2621VY5|1|CWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
2638CVL|1|1yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.32022-10-19
2644V5C|1|CWTransfer RNAE-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
2651VY5|1|CYTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
2666UCQ|1|1xTransfer RNAmRNA, P-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.52019-12-25
2674WQR|1|1LTransfer RNAtRNA-PheEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
2688CVL|1|2yTransfer RNAE-site Deacylated tRNApheEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.32022-10-19
2694V9I|1|AWTransfer RNAE-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
2704WPO|1|DWTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
2714V9I|1|CWTransfer RNAE-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
2724V5L|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005The structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-ray diffraction3.12014-07-09
2734W2H|1|AYTransfer RNAE-site tRNA Acceptor StemEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
2744V9C|1|CVTransfer RNAMessenger RNA, mRNA, Phenylalanine specific transfer RNA, tRNA-PheEscherichia coliBacteriaRF00005Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
2754WQU|1|BYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
2764W2H|1|CYTransfer RNAE-site tRNA Acceptor StemEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
2776UCQ|1|2yTransfer RNAP-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.52019-12-25
2784W2E|1|xTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Crystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.92014-10-01
2794WQU|1|DYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-ray diffraction2.82015-01-28
2804WQF|1|BYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
2816UCQ|1|2xTransfer RNAmRNA, P-site and E-site tRNAsEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome recycling complexX-ray diffraction3.52019-12-25
2824WQF|1|DYTransfer RNAP-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-ray diffraction2.82015-01-28
2838G6W|1|YTransfer RNAA-site oABZ-tRNAPhe, mRNAEscherichia coliBacteriaRF00005Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.022023-04-05
2848AKN|1|XTransfer RNAmRNA, Phenylalanine-tRNAEscherichia coli BW25113BacteriaRF00005Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeElectron microscopy2.32023-03-08
2857S1K|1|ATransfer RNAmRNA, tRNA(PHE)Escherichia coliBacteriaRF00005Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.422022-01-19
2867S1I|1|ATransfer RNAmRNA, tRNA(PHE)Escherichia coliBacteriaRF00005Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.482022-03-02
2877S1G|1|ATransfer RNAmRNA, tRNA(PHE)Escherichia coliBacteriaRF00005wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
2887N1P|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
2898G6X|1|YTransfer RNAA-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.312023-03-22
2908IFB|1|5Transfer RNAA-site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Dibekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.432024-02-14
2918G6Y|1|YTransfer RNAA-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.092023-04-05
2927N2U|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.532021-07-14
2936YSS|1|wTransfer RNAmRNA, P-site tRNAPheEscherichia coliBacteriaRF00005Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.62020-08-19
2947UG7|1|PtTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF0000570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.582022-05-18
2958G5Z|1|AtTransfer RNAA-site tRNA Phe, mRNAEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.642023-04-19
2966AZ1|1|2Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.72017-12-06
2976AZ1|1|4Transfer RNAE-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.72017-12-06
2987N30|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.662021-07-14
2997N31|1|DtTransfer RNAmRNA, tRNAEscherichia coli K-12BacteriaRF00005Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.692021-07-14
3007N2C|1|DtTransfer RNAChains: mR, tRNAEscherichia coliBacteriaRF00005Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.722021-07-14
3018EKC|1|wTransfer RNAA-site phenylalanine tRNA, M-F-Stop mRNAEscherichia coliBacteriaRF00005Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.72022-12-07
3026WDE|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
3038IFC|1|5Transfer RNAA-site tRNA-Phe, mRNAEscherichia coliBacteriaRF00005Arbekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.92024-02-14
3048G61|1|AtTransfer RNAA-site tRNA, mRNAEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.942023-04-19
3058SYL|1|wTransfer RNAM-F-Stop mRNA, phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.92023-08-09
3065AFI|1|yTransfer RNAA/T-site Phe-tRNAPhe, mRNAEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
3078SYL|1|yTransfer RNAphenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.92023-08-09
3086WDD|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.22020-07-01
3095UYM|1|YTransfer RNAmRNA, Phe-tRNAPheEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
3105UQ8|1|zTransfer RNAE-site tRNA PheEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)Electron microscopy3.22018-03-07
3116WNW|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.22020-06-24
3128UU5|1|xTransfer RNAF-Stop mRNA, pe/E Hybrid State Phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)Electron microscopy32024-02-28
3135WDT|1|yTransfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
3145WFS|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
3156YSR|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coliBacteriaRF00005Structure of the P+9 stalled ribosome complexElectron microscopy3.12020-08-19
3167PJV|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.12021-10-20
3177PJY|1|wTransfer RNAmRNA, P-site fMet-Phe-tRNA(Phe)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.12021-10-20
3186WDG|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.32020-07-01
3197Q4K|1|D3Transfer RNAMsrDL mRNA, Phe-tRNA (E site)Escherichia coliBacteriaRF00005Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainElectron microscopy32022-11-16
3206WDF|1|7Transfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.32020-07-01
3218UU8|1|xTransfer RNAF-Stop mRNA, pe/E Hybrid State Phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)Electron microscopy3.12024-02-28
3228UU9|1|xTransfer RNAF-Stop mRNA, pe/E Hybrid State Phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)Electron microscopy3.12024-02-28
3235WE4|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
3246VWL|1|5Transfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.12020-06-03
3257AC7|1|7Transfer RNAmRNA, tRNA-PheEscherichia coliBacteriaRF00005Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.082021-08-18
3266YST|1|wTransfer RNAmRNA, P/E-site tRNAPheEscherichia coliBacteriaRF00005Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.22020-08-19
3276ZTO|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32020-09-23
3286ZTP|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32020-09-16
3296ZU1|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32020-09-16
3307ABZ|1|7Transfer RNAtRNA-PheEscherichia coli K-12BacteriaRF00005Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.212021-08-18
3318QFS|1|BTransfer RNAtRNAEscherichia coli 'BL21-Gold(DE3)pLysS AGBacteriaRF00005Cryo-EM structure of SidH from Legionella pneumophilaElectron microscopy2.72023-10-11
3327QGN|1|ATransfer RNAA-site tRNAEscherichia coliBacteriaRF00005Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeElectron microscopy3.372022-04-27
3338UU7|1|yTransfer RNAE-site Phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)Electron microscopy3.22024-02-28
3346BU8|1|YTransfer RNAmRNA, tRNAPheEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
3355UQ7|1|zTransfer RNAE-site tRNA PheEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)Electron microscopy3.52018-03-07
3368UU6|1|xTransfer RNAF-Stop mRNA, p/E Hybrid State Phenylalanine tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)Electron microscopy3.32024-02-28
3378PEG|1|WTransfer RNAmRNA, tRNA-Phe (P-site)Escherichia coliBacteriaRF00005Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)Electron microscopy3.32024-03-06
3385IQR|1|4Transfer RNAE-site tRNA(Phe)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
3395WE6|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
3405WFK|1|yTransfer RNAmRNA, Phe-tRNA-PheEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
3416VWM|1|5Transfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.42020-06-03
3426VWN|1|5Transfer RNAtRNAPheEscherichia coliBacteriaRF0000570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.42020-06-03
3436ZTM|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.32020-09-16
3448QHC|1|BTransfer RNAt-RNAEscherichia coli 'BL21-Gold(DE3)pLysS AGBacteriaRF00005Cryo-EM structure of SidH from Legionella pneumophila in complex with LubXElectron microscopy3.12023-10-11
3456ZTJ|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.42020-09-16
3466ZTL|1|AXTransfer RNAmRNA, Phe-NH-tRNA(Phe) A-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.52020-09-16
3475IQR|1|6Transfer RNAA/T tRNA(Phe), mRNAEscherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
3488R3V|1|W1Transfer RNAmessenger RNA, tRNA-Phe (P-site)Escherichia coliBacteriaRF00005Escherichia coli paused disome complex (non-rotated disome interface)Electron microscopy3.282024-03-06
3498RCL|1|W1Transfer RNAmessenger RNA, tRNA-Phe (P-site)Escherichia coliBacteriaRF00005Escherichia coli paused disome complex (Non-rotated disome interface class 1)Electron microscopy3.492024-03-13
3503JBV|1|VTransfer RNARNA (5'-R(P*CP*UP*GP*GP*CP*CP*CP*UP*CP*AP*A)-3'), RNA (76-MER)Escherichia coliBacteriaRF00005Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27

Release history

Release3.3393.340
Date2024-06-122024-06-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
14YCO|1|FE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.171
24YCO|1|DE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.174
34YCO|1|EE. coli dihydrouridine synthase C (DusC) in complex with tRNAPheX-RAY DIFFRACTION2.167
47QGN|1|AStructure of the SmrB-bound E. coli disome - stalled 70S ribosomeELECTRON MICROSCOPY3.3773
53L0U|1|AThe crystal structure of unmodified tRNAPhe from Escherichia coliX-RAY DIFFRACTION373
64WOI|1|AX4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION376
74V9C|1|CVAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.376
82ZM5|1|DCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.5569
92ZXU|1|DCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.7569
102ZXU|1|CCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe) and DMASPPX-RAY DIFFRACTION2.7574
112ZM5|1|CCrystal structure of tRNA modification enzyme MiaA in the complex with tRNA(Phe)X-RAY DIFFRACTION2.5574
123FOZ|1|CStructure of E. coli Isopentenyl-tRNA transferase in complex with E. coli tRNA(Phe)X-RAY DIFFRACTION2.574
137ABZ|1|7Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.2168
146VWM|1|570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.476
156VWN|1|570S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.476
168R3V|1|W1Escherichia coli paused disome complex (non-rotated disome interface)ELECTRON MICROSCOPY3.2831
178PEG|1|WEscherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)ELECTRON MICROSCOPY3.366
188RCL|1|W1Escherichia coli paused disome complex (Non-rotated disome interface class 1)ELECTRON MICROSCOPY3.4931
198AKN|1|XCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeELECTRON MICROSCOPY2.376
204W2E|1|wCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.968
214WQU|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.869
224WQF|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.869
234WQU|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.869
244WQF|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.869
256QNR|1|2L70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.167
267AZO|1|PSIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.367
277AZS|1|PSIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.168
285NDJ|1|X4Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
295NDK|1|X4Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
304V6F|1|BCElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
314V6F|1|CCElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
325NDK|1|X1Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
335NDJ|1|X1Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
347AZS|1|PSIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.168
356QNR|1|2K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.166
367AZO|1|PSIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.367
374V9D|1|BVStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION376
384V9C|1|AVAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.376
394WOI|1|DW4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION376
404V5Q|1|CVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
414V5S|1|AVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
424V5Q|1|AVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
434V5P|1|AVThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
444V5P|1|CVThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
454V5R|1|CVThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
464V5R|1|AVThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
474V5S|1|CVThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
484V5L|1|AVThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.176
497AC7|1|7Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.0866
504V5J|1|CVStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
514V5J|1|AVStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
526C5L|1|AVConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.276
536C5L|1|CVConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.276
544V5E|1|AVInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
554V5E|1|CVInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
564V5D|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
574V5D|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
587N1P|1|DtElongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.3368
596YSR|1|wStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.169
606YSS|1|wStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.669
617PJY|1|wStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.169
627S1K|1|ACfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.4276
637S1I|1|AWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.4876
647S1G|1|Awild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.4876
657UG7|1|Pt70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.5868
667PJV|1|wStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.169
678IFB|1|5Dibekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.4369
688IFC|1|5Arbekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.969
698G61|1|AtmRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.9470
706ZTM|1|AXE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.366
716ZU1|1|AXE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY366
726ZTP|1|AXE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY366
736ZTO|1|AXE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY366
746ZTJ|1|AXE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.466
756ZTL|1|AXE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.566
766WNW|1|7Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.276
776WDD|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.276
786WDE|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY376
796BU8|1|Y70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.576
808SYL|1|wCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.967
818EKC|1|wEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.766
823JBV|1|VMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.3276
834V5C|1|AYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.375
844V5C|1|CYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.375
854V5D|1|AYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
864V5D|1|CYStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.575
876AZ1|1|2Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.775
886CFJ|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.865
895W4K|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.765
905J4B|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.665
915J4C|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.865
925WIS|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.765
934Y4P|1|2wCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.565
946ND5|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.665
955VP2|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.862
964W2F|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.465
974W2G|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5565
981VY5|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5564
991VY4|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.664
1004WPO|1|DWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.864
1014W2I|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.765
1025WIT|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.664
1036CFJ|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.867
1045W4K|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.767
1055J4C|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.867
1065J4B|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.667
1075WIS|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.767
1084Y4P|1|1wCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.567
1096ND5|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.667
1105VP2|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.865
1116UO1|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9564
1126UO1|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9562
1136WDG|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.376
1146WDF|1|7Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.376
1155DOY|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.668
1165DOY|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.667
1174Z3S|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6567
1184Z3S|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6566
1197RQ8|1|2wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.562
1207RQ9|1|2wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.663
1216XHV|1|2wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.464
1226XHY|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.664
1236XHW|1|2wCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.564
1248CVJ|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.464
1258CVK|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.564
1268CVL|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.364
1278G2C|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6564
1288G29|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5564
1298G2A|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4564
1308G29|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5566
1318G2A|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4566
1328G2C|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6566
1338CVL|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.366
1348CVK|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.566
1358CVJ|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.466
1366XHW|1|1wCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.566
1376XHY|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.666
1386XHV|1|1wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.466
1398EV6|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94667
1408EV7|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8967
1418G2D|1|1wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.767
1428UD8|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.667
1438G2B|1|1wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5566
1448UD6|1|1wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.765
1458UD7|1|1wCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5565
1467RQ9|1|1wCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.665
1477RQ8|1|1wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.564
1485WIT|1|1wCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.666
1494W2F|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.467
1504W2G|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5567
1514WPO|1|BWCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.866
1521VY4|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.666
1531VY5|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5566
1544W2I|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.767
1558G2D|1|2wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.765
1568EV7|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8965
1578EV6|1|2wCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94665
1588UD6|1|2wCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.763
1598G2B|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5563
1608UD7|1|2wCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5562
1618UD8|1|2wCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.665
1625NDK|1|W1Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
1635NDJ|1|W1Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
1645NDJ|1|W4Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
1655NDK|1|W4Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
1664V6F|1|BBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1674V6F|1|CBElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1684WRO|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0567
1694WQR|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1573
1704WSD|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9570
1714WT1|1|1KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0569
1724WSD|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
1734WT1|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1744WRO|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0568
1754WQR|1|1LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1573
1767AZS|1|ASIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.169
1777AZO|1|ASIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.369
1786QNR|1|1K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.169
1796QNR|1|1L70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.172
1807AZO|1|ASIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.372
1817AZS|1|ASIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.172
1828G6W|1|YStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0274
1838G6Y|1|YStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0974
1848G6X|1|YStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.3174
1856QNR|1|5K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.168
1867AZS|1|TRNA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.167
1877AZO|1|TRNA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.365
1886UCQ|1|2xCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.567
1896UCQ|1|1xCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.567
1906QNR|1|3K70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.173
1916QNR|1|3L70S ribosome elongation complex (EC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.173
1924WQR|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
1934WZO|1|3LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.370
1944WRO|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0568
1954WT1|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
1964WSD|1|3LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9571
1974V6F|1|BDElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
1987AZO|1|ESIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.375
1997AZS|1|ESIB70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.175
2007AZS|1|ESIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-569X-RAY DIFFRACTION3.175
2017AZO|1|ESIA70S thermus thermophilus ribosome with bound antibiotic lead SEQ-977X-RAY DIFFRACTION3.375
2024V6F|1|CDElongation complex of the 70S ribosome with three tRNAs and mRNA.X-RAY DIFFRACTION3.175
2035NDJ|1|V4Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
2045NDK|1|V4Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
2055NDK|1|V1Crystal structure of aminoglycoside TC007 co-crystallized with 70S ribosome from Thermus thermophilus, three tRNAs and mRNAX-RAY DIFFRACTION2.9576
2065NDJ|1|V1Crystal structure of aminoglycoside TC007 in complex with 70S ribosome from Thermus thermophilus, three tRNAs and mRNA (soaking)X-RAY DIFFRACTION3.1576
2074WT1|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0576
2084WSD|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
2094WQR|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1576
2104WZO|1|3KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.370
2114WRO|1|3KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0568
2125IQR|1|4Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY376
2134V5L|1|AWThe structure of EF-Tu and aminoacyl-tRNA bound to the 70S ribosome with a GTP analogX-RAY DIFFRACTION3.176
2144V5S|1|AWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
2154V5Q|1|AWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
2164V5P|1|AWThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
2174V5P|1|CWThe crystal structure of EF-Tu and A9C-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
2184V5R|1|CWThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
2194V5R|1|AWThe crystal structure of EF-Tu and Trp-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
2204V5S|1|CWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a cognate codon on the 70S ribosome.X-RAY DIFFRACTION3.176
2214V5Q|1|CWThe crystal structure of EF-Tu and G24A-tRNA-Trp bound to a near- cognate codon on the 70S ribosomeX-RAY DIFFRACTION3.176
2228UU7|1|yCryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)ELECTRON MICROSCOPY3.267
2238SYL|1|yCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.967
2245UQ7|1|z70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)ELECTRON MICROSCOPY3.576
2254V5D|1|AWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
2264V5C|1|CWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
2274V5C|1|AWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
2284V5D|1|CWStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A- and P-site tRNAs, and E-site tRNA.X-RAY DIFFRACTION3.576
2294V51|1|AWStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
2304V51|1|CWStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
2314Z3S|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6567
2325DOY|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.667
2337RQ9|1|1yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.667
2347RQ8|1|1yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.567
2355W4K|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.768
2368EV6|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94667
2378EV7|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8967
2388G2D|1|1yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.767
2398UD6|1|1yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.767
2408UD7|1|1yCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5567
2418UD8|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.667
2428G2B|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5567
2438G2C|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6567
2448G29|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5567
2458G2A|1|1yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4567
2468CVK|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.567
2478CVJ|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.467
2488CVL|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.367
2496XHV|1|1yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.467
2506XHY|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.667
2516XHW|1|1yCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.567
2526UO1|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9566
2534W2G|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5566
2544W2I|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.766
2551VY5|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5566
2561VY4|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.666
2574WQU|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.866
2584WQF|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.866
2594WPO|1|DYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.866
2604Z3S|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6566
2615DOY|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.666
2624W2F|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.466
2634Y4P|1|2yCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.566
2645J4B|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.666
2655J4C|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.866
2666CFJ|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.866
2675WIT|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.666
2686XHV|1|2yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.466
2696XHY|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.666
2706XHW|1|2yCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.566
2717RQ9|1|2yCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.666
2727RQ8|1|2yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.566
2738CVJ|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.466
2748CVK|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.566
2758CVL|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.366
2768G2A|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4566
2778G29|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5566
2788G2C|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6566
2798G2B|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5566
2808UD7|1|2yCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5566
2818UD8|1|2yCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.666
2828UD6|1|2yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.766
2838G2D|1|2yCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.766
2848EV7|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8966
2858EV6|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94666
2865WIS|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.766
2875W4K|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.767
2885VP2|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.866
2896ND5|1|2yCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.666
2905WIS|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.767
2915VP2|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.867
2926ND5|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.667
2934Y4P|1|1yCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.567
2945J4B|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.667
2955J4C|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.867
2966CFJ|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with histidyl-CAM and bound to mRNA and A-, P-, and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.867
2974W2F|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.467
2985WIT|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.667
2996UO1|1|1yCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9567
3004W2G|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5567
3014W2I|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.767
3021VY5|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5567
3031VY4|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.667
3044W2E|1|xCrystal structure of Elongation Factor 4 (EF4/LepA) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.967
3054WQU|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycinX-RAY DIFFRACTION2.867
3064WQF|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational stateX-RAY DIFFRACTION2.867
3074WPO|1|BYCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.867
3086UCQ|1|1yCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.567
3096UCQ|1|2yCrystal structure of the Thermus thermophilus 70S ribosome recycling complexX-RAY DIFFRACTION3.567
3104V5E|1|CWInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
3114W2H|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.718
3124V9I|1|AWCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.376
3134V9I|1|CWCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.376
3146C5L|1|CWConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.275
3156C5L|1|AWConformation of methylated GGQ in the Peptidyl Transferase Center during translation termination (T. thermophilus)X-RAY DIFFRACTION3.275
3164V5J|1|CWStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
3174V5J|1|AWStructure of the 70S ribosome bound to Release factor 2 and a substrate analog provides insights into catalysis of peptide releaseX-RAY DIFFRACTION3.175
3184V5E|1|AWInsights into translational termination from the structure of RF2 bound to the ribosomeX-RAY DIFFRACTION3.4576
3197LH5|1|CWCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2776
3207LH5|1|AWCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2776
3217Q4K|1|D3Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainELECTRON MICROSCOPY368
3226YST|1|wStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.269
3237N31|1|DtElongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.6968
3246AZ1|1|4Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.776
3256VWL|1|570S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.176
3268UU6|1|xCryo-EM structure of the ratcheted Listeria innocua 70S ribosome in complex with p/E-tRNA (structure II-A)ELECTRON MICROSCOPY3.367
3278UU9|1|xCryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)ELECTRON MICROSCOPY3.167
3288UU8|1|xCryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)ELECTRON MICROSCOPY3.167
3298UU5|1|xCryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)ELECTRON MICROSCOPY367
3307N2C|1|DtElongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.7269
3317N2U|1|DtElongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.5369
3327N30|1|DtElongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.6669
3334V9D|1|AVStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION376
3344V9H|1|AVCrystal structure of the ribosome bound to elongation factor G in the guanosine triphosphatase stateX-RAY DIFFRACTION2.8674
3356Y3G|1|FCrystal structure of phenylalanine tRNA from Escherichia coliX-RAY DIFFRACTION3.167
3368QFS|1|BCryo-EM structure of SidH from Legionella pneumophilaELECTRON MICROSCOPY2.755
3378QHC|1|BCryo-EM structure of SidH from Legionella pneumophila in complex with LubXELECTRON MICROSCOPY3.155
3385WFK|1|y70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.467
3395UYM|1|Y70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.276
3405AFI|1|y2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.967
3415WFS|1|y70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY367
3425WDT|1|y70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY367
3435WE4|1|y70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.167
3445WE6|1|y70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.467
3458G5Z|1|AtmRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.6469
3465IQR|1|6Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY367
3475UQ8|1|z70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)ELECTRON MICROSCOPY3.276
3484W2H|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.75
3491VY7|1|AYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.85
3501VY7|1|CYCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.85

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.