#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15L4O|1|A (rep)Transfer RNAtRNA (76-MER)Escherichia coliBacteriaRF00005Structure of an E.coli initiator tRNAfMet A1-U72 variantX-ray diffraction2.82017-03-01
25HCQ|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
38G2C|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.652023-12-27
48G2A|1|1xTransfer RNAP-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.452023-12-27
58UD7|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.552024-02-21
64V6G|1|CCTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
78G29|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.552023-12-27
88G2A|1|2xTransfer RNAP-site Peptidyl-tRNA fMTHSMRC-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-ray diffraction2.452023-12-27
98G29|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-ray diffraction2.552023-12-27
108G2C|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-ray diffraction2.652023-12-27
114WQ1|1|2KTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
125IBB|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
138EKB|1|1xTransfer RNAM-Stop-mRNA, P-site deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-ray diffraction2.72022-12-21
146CAE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-04-18
158UD7|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.552024-02-21
167U2J|1|1xTransfer RNAMG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.552022-07-13
178G2B|1|1xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.552023-12-27
188UD8|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.62024-02-21
198UD6|1|1xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.72024-02-21
204WQR|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
215HCQ|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
228EKB|1|2xTransfer RNAM-Stop-mRNA, P-site deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-ray diffraction2.72022-12-21
238UD8|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.62024-02-21
247OSA|1|PSITTransfer RNAMRNA, Psite tRNA-PheEscherichia coliBacteriaRF00005Pre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
257U2H|1|1xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-ray diffraction2.552022-07-13
268G2B|1|2xTransfer RNAP-site Aminoacylated fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-ray diffraction2.552023-12-27
275IB7|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
284V8D|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
297RQ8|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.52021-10-13
305HCR|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
314Z8C|1|1xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
325J4B|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
337U2J|1|2xTransfer RNAMG-mRNA, P-site Peptidyl-tRNA fMAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.552022-07-13
344WQ1|1|2LTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.12015-06-10
356XHY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
365EL7|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
374WSD|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
388UD6|1|2xTransfer RNAMF-mRNA, P-site Aminoacyl-tRNA fMet-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-ray diffraction2.72024-02-21
398EV7|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.892023-08-09
404V8D|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-ray diffraction32014-07-09
415IBB|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-ray diffraction2.962016-05-25
426XHY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-ray diffraction2.62020-12-23
435J4B|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62016-04-27
444Z8C|1|2xTransfer RNAInitiator Methionine tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-ray diffraction2.92015-05-20
454WSD|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-ray diffraction2.952015-06-10
466CAE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-04-18
474WT1|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
484WQR|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-ray diffraction3.152015-06-10
495J4C|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
504WPO|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
515W4K|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
521VY4|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
536OF1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.82019-04-17
544V6G|1|ACTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
555DFE|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.12016-10-12
566QNQ|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.52019-06-19
576XHW|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
584W2H|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
597RQ8|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-ray diffraction2.52021-10-13
605HCR|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-04-06
615EL7|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-ray diffraction3.152016-01-27
625HD1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
634LNT|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
645HCP|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
656OF1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-ray diffraction2.82019-04-17
668CVK|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.52022-10-19
675HAU|1|1wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
685J4C|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82016-04-27
697U2I|1|1xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.552022-07-13
704W2I|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
716XHV|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
725WIS|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
735IB7|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-ray diffraction2.992016-05-25
745EL6|1|2KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
754WT1|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
765IB8|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.132016-05-25
774W2G|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
786XQD|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.82020-08-05
796ND5|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
804LNT|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-ray diffraction2.942014-08-06
814W2H|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-ray diffraction2.72014-10-15
824V7M|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
835W4K|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72017-08-30
848EV7|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.892023-08-09
854YZV|1|XVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
868CVK|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-ray diffraction2.52022-10-19
877U2H|1|2xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-ray diffraction2.552022-07-13
888G2D|1|1xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.72023-12-27
895DFE|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.12016-10-12
904WRA|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
916XHW|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-ray diffraction2.52020-12-23
924WRA|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-ray diffraction3.052015-06-10
935EL6|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-ray diffraction3.12016-01-27
945HAU|1|2wTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-ray diffraction32016-04-06
955E7K|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
966XQD|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-ray diffraction2.82020-08-05
976XHV|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-ray diffraction2.42020-12-23
985IB8|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-ray diffraction3.132016-05-25
994V9S|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
1004Y4P|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1014W2G|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.552014-10-15
1024WR6|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1036O97|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.752019-04-17
1048CVJ|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.42022-10-19
1054WR6|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-ray diffraction3.052015-06-10
1063CW5|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.12008-09-02
1075EL4|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
1085HCP|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.892016-04-06
1095DOY|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
1104ZER|1|1xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
1115WIT|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
1124W4G|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1135EL5|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1145VP2|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82017-06-28
1156QNQ|1|2LTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.52019-06-19
1168EV6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.9462023-08-09
1175HD1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.72016-04-06
1184W2I|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.72014-10-15
1194V9S|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic GE82832 bound to 70S ribosomeX-ray diffraction3.12014-07-09
1206ND5|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-ray diffraction2.62019-03-20
1218CVJ|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMSEAC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-ray diffraction2.42022-10-19
1228CVL|1|1xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.32022-10-19
1235E7K|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-ray diffraction3.22016-01-27
1247RQ9|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.62021-10-13
1251VY7|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
1264Z3S|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
1278G2D|1|2xTransfer RNAP-site Deacylated tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-ray diffraction2.72023-12-27
1281VY4|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-ray diffraction2.62014-08-20
1294W2F|1|AXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
1301VY5|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
1314YZV|1|QVTransfer RNAmessenger RNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-ray diffraction3.12015-10-21
1324WPO|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-ray diffraction2.82015-01-28
1334V51|1|CVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1344V8Q|1|BVTransfer RNAE-SITE or P-SITE TRNA FMET, MRNAEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
1357JQL|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-26
1367U2I|1|2xTransfer RNAMG-mRNA, P-site Aminoacyl-tRNA fMet-NH-tRNAmetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-ray diffraction2.552022-07-13
1378CVL|1|2xTransfer RNAMF-mRNA, P-site Peptidyl-tRNA fMTHSMRC-NH-tRNAmet RNA-partEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-ray diffraction2.32022-10-19
1387JQM|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-ray diffraction3.052020-08-26
1394YPB|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1407JQL|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-26
1414W4G|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
1424V9R|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
1434WZO|1|2KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1447RQ9|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-ray diffraction2.62021-10-13
1455EL4|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-ray diffraction3.152016-01-27
1464V9R|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-ray diffraction32014-07-09
1474W2F|1|CXTransfer RNAE-site tRNA, mRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-ray diffraction2.42014-10-15
1485WIS|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-ray diffraction2.72018-02-14
1494WRO|1|2KTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1504V8E|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
1514V51|1|AVTransfer RNAE-SITE TRNA PHE OR A-SITE TRNA PHE (UNMODIFIED BASES), MRNA, P-SITE TRNA FMET (UNMODIFIED BASES EXCEPT FOR THYMINE 54)Escherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-ray diffraction2.82014-07-09
1526ND6|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.852019-02-20
1534V5C|1|AVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
1546O97|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-ray diffraction2.752019-04-17
1554Y4P|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-ray diffraction2.52015-03-18
1567JQM|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-ray diffraction3.052020-08-26
1571VY6|1|AXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
1584Z3S|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-ray diffraction2.652015-06-03
1594ZER|1|2xTransfer RNAmRNA, tRNA metEscherichia coliBacteriaRF00005Crystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction3.12015-05-20
1606UO1|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1616UO1|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-ray diffraction2.952019-11-27
1625VP2|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-ray diffraction2.82017-06-28
1631VY6|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.92014-08-20
1648EV6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-ray diffraction2.9462023-08-09
1654WQY|1|BXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
1665DOY|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-ray diffraction2.62015-12-30
1674WRO|1|2LTransfer RNARNA (30-MER), tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-ray diffraction3.052015-06-10
1685WIT|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-ray diffraction2.62018-02-14
1694V8F|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
1705F8K|1|1xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1714V5C|1|CVTransfer RNAMRNA, P-SITE TRNA FMETEscherichia coliBacteriaRF00005Structure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-ray diffraction3.32014-07-09
1724V87|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
1737OSM|1|PSITTransfer RNAFMET tRNA, MRNAEscherichia coliBacteriaRF00005Intermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-ray diffraction32021-12-08
1744WZO|1|2LTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
1756ND6|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-ray diffraction2.852019-02-20
1761VY5|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-ray diffraction2.552014-08-20
1774YPB|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
1784V8B|1|ACTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
1794LT8|1|XVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
1804V87|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
1814V8C|1|DCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
1825EL5|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-ray diffraction3.152016-01-27
1834V7M|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), RNA (77-MER)Escherichia coliBacteriaRF00005The structures of Capreomycin bound to the 70S ribosome.X-ray diffraction3.452014-07-09
1844V8E|1|BCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-ray diffraction3.32014-07-09
1856XQE|1|1xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-05
1867LH5|1|AVTransfer RNAE-Site tRNA Phe and A-site tRNA Phe, mRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.272021-06-02
1874V9I|1|AVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
1887LH5|1|CVTransfer RNAE-Site tRNA Phe and A-site tRNA Phe, mRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-ray diffraction3.272021-06-02
1896GSK|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-ray diffraction3.362018-07-04
1904V67|1|AYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
1916XQE|1|2xTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-ray diffraction32020-08-05
1924V7L|1|CXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1934V8B|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
1944V7L|1|AXTransfer RNARNA (5'-R(*AP*AP*AP*AP*AP*GP*GP*AP*AP*AP*UP*A*AP*AP*AP*AP*UP*GP*CP*AP*GP*UP*UP*CP*AP*AP*UP*CP*UP*A)-3'), tRNA-MetEscherichia coliBacteriaRF00005The structures of viomycin bound to the 70S ribosome.X-ray diffraction32014-07-09
1954LT8|1|QVTransfer RNAA-site ASL Pro, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-ray diffraction3.142014-08-06
1964V8C|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
1974V5K|1|AVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHE, MRNAEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
1985F8K|1|2xTransfer RNAmRNA, tRNAiMetEscherichia coliBacteriaRF00005Crystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-ray diffraction2.82016-02-03
1994V67|1|CYTransfer RNAMRNA, P AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
2001VVJ|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
2016QNQ|1|3KTransfer RNAE. coli tRNAfMetEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.52019-06-19
2024WQY|1|DXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-ray diffraction2.82015-01-28
2031VY7|1|CXTransfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Crystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-ray diffraction2.82014-08-20
2045CZP|1|XVTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.32016-10-12
2056GSK|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-ray diffraction3.362018-07-04
2065CZP|1|QVTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF0000570S termination complex containing E. coli RF2X-ray diffraction3.32016-10-12
2074V9I|1|CVTransfer RNAmRNA, P-SITE tRNAEscherichia coliBacteriaRF00005Crystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-ray diffraction3.32014-07-09
2084V8F|1|CCTransfer RNAMRNA, TRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-ray diffraction3.32014-07-09
2094LSK|1|XVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
2104V6G|1|CDTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
2114V63|1|AYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
2124LSK|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-ray diffraction3.482014-08-06
2134V63|1|CYTransfer RNAmRNA, P and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
2141VVJ|1|QVTransfer RNAA-site ASL SufA6, messenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Crystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-ray diffraction3.442014-08-06
2153CW6|1|ATransfer RNAInitiator tRNAEscherichia coliBacteriaRF00005E. coli Initiator tRNAX-ray diffraction3.32008-09-02
2163QSY|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Recognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-ray diffraction3.22012-03-21
2176QNQ|1|3LTransfer RNAE. coli tRNAfMetEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.52019-06-19
2186B4V|1|HBTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.42018-02-07
2194V6G|1|ADTransfer RNATRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
2204V8C|1|DDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
2214WZO|1|1KTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Complex of 70S ribosome with tRNA-fMet and mRNAX-ray diffraction3.32015-06-10
2226B4V|1|IATransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.42018-02-07
2236B4V|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.42018-02-07
2244V5K|1|CVTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
2256B4V|1|MCTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-ray diffraction3.42018-02-07
2264V8C|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-ray diffraction3.32014-07-09
2274V8B|1|ADTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
2284V87|1|BDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
2296QNQ|1|1KTransfer RNAE. coli tRNAfMet, mRNAEscherichia coliBacteriaRF0000570S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-ray diffraction3.52019-06-19
2304W4G|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
2314W4G|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Postcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-ray diffraction3.32015-10-21
2324V87|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding.X-ray diffraction3.12014-07-09
2334V63|1|CZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
2344V8B|1|CDTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-ray diffraction32014-07-09
2354V67|1|AZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
2364V63|1|AZTransfer RNAP and E-site tRNA(fMet)Escherichia coliBacteriaRF00005Structural basis for translation termination on the 70S ribosome.X-ray diffraction3.212014-07-09
2374V6G|1|CBTransfer RNAMRNA, TRNA FMET (UNMODIFIED BASES)Escherichia coliBacteriaRF00005Initiation complex of 70S ribosome with two tRNAs and mRNA.X-ray diffraction3.52014-07-09
2384V67|1|CZTransfer RNAP AND E-SITE TRNA(FMET)Escherichia coliBacteriaRF00005Crystal structure of a translation termination complex formed with release factor RF2.X-ray diffraction32014-07-09
2394V5K|1|AWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
2404V5K|1|CWTransfer RNAE-SITE TRNA PHE OR P-SITE TRNA PHEEscherichia coliBacteriaRF00005Structure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-ray diffraction3.22014-07-09
2414YPB|1|XWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
2424YPB|1|QWTransfer RNAtRNA fMetEscherichia coliBacteriaRF00005Precleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-ray diffraction3.42015-10-21
2434V5A|1|AWTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
2444V5A|1|CWTransfer RNATRNA-FMETEscherichia coliBacteriaRF00005Structure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-ray diffraction3.52014-07-09
2454V8Q|1|BWTransfer RNAE-SITE or P-SITE TRNA FMETEscherichia coliBacteriaRF00005Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-ray diffraction3.12014-07-09
2466GSJ|1|2LTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.962018-07-04
2475J4D|1|NCTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
2486GSJ|1|2KTransfer RNARNA (27-MER), tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-ray diffraction2.962018-07-04
2495J4D|1|IATransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
2504V6A|1|CWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
2514V6A|1|AWTransfer RNARNA (5'-R(P*AP*AP*AP*UP*G)-3'), tRNA-MetEscherichia coliBacteriaRF00005Structure of EF-P bound to the 70S ribosome.X-ray diffraction3.12014-07-09
2525J4D|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
2535J4D|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005E. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-ray diffraction3.12016-05-18
2546GSL|1|2LTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-ray diffraction3.162018-07-04
2556GSL|1|2KTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-ray diffraction3.162018-07-04
2566BOH|1|NCTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.42018-05-23
2576BOH|1|IATransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.42018-05-23
2586BOH|1|DTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.42018-05-23
2596BOH|1|IBTransfer RNAtRNAEscherichia coliBacteriaRF00005Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-ray diffraction3.42018-05-23
2608B0X|1|ZTransfer RNAmRNA, P-site tRNAEscherichia coli BBacteriaRF00005Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
2618FTO|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.852023-08-02
2628CCS|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF0000580S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complexElectron microscopy1.972023-09-20
2638AYE|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.962023-03-01
2647K00|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
2658P2G|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric stateElectron microscopy2.022024-05-01
2668CDR|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.042023-09-20
2678CEH|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.052023-09-20
2688G6W|1|ZTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.022023-04-05
2698BIL|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.Electron microscopy2.042023-08-16
2708EMM|1|YTransfer RNAMet-NH-tRNA, mRNAEscherichia coliBacteriaRF00005Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.12023-05-31
2718EMM|1|ZTransfer RNAMet-NH-tRNA, mRNAEscherichia coliBacteriaRF00005Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.12023-05-31
2726XZ7|1|fTransfer RNADeacylated tRNAi(Met)Escherichia coliBacteriaRF00005E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.12020-07-22
2738G6Y|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.092023-04-05
2748BIM|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteElectron microscopy2.042023-08-16
2758BGE|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.112023-08-16
2768CGN|1|BbTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Non-rotated 80S S. cerevisiae ribosome with ligandsElectron microscopy2.282023-09-20
2778CGN|1|CcTransfer RNATransfer RNA fMetEscherichia coliBacteriaRF00005Non-rotated 80S S. cerevisiae ribosome with ligandsElectron microscopy2.282023-09-20
2788EIU|1|YTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.242023-02-01
2798EIU|1|ZTransfer RNAmRNA, tRNA-fMETEscherichia coliBacteriaRF00005E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.242023-02-01
2808BF7|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.332023-08-16
2818BHL|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.212023-08-16
2827TOP|1|APTNTransfer RNAtRNAfMetEscherichia coliBacteriaRF00005Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.42022-05-25
2838P2F|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateElectron microscopy2.442024-05-01
2847Y7G|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)Electron microscopy2.342023-10-25
2858P2F|1|FTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateElectron microscopy2.442024-05-01
2868G6X|1|ZTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.312023-03-22
2878CIV|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.472023-09-20
2888P2H|1|DTransfer RNAmRNA, tRNAEscherichia coliBacteriaRF00005Staphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric stateElectron microscopy2.492024-05-01
2897Y7E|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.412023-10-25
2908BHP|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.372023-08-16
2918IFB|1|6Transfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dibekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.432024-02-14
2927Y7F|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)Electron microscopy2.432023-10-25
2937SA4|1|5Transfer RNAmRNA, P-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.552022-08-03
2947SA4|1|6Transfer RNAP-tRNA, E-tRNAEscherichia coliBacteriaRF00005Damaged 70S ribosome with PrfH boundElectron microscopy2.552022-08-03
2958CG8|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.572023-09-20
2967Y7H|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)Electron microscopy2.512023-10-25
2977Y7C|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)Electron microscopy2.512023-10-25
2986XZB|1|f2Transfer RNADeacylated tRNAi(Met)Escherichia coli K-12BacteriaRF00005E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.542020-11-04
2998BH4|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.622023-08-16
3007UG7|1|DtTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.582022-05-18
3017Y7D|1|ZTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.582023-10-25
3027TOO|1|APTNTransfer RNAtRNAfMetEscherichia coliBacteriaRF00005Yeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.72022-05-25
3037UNW|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)Electron microscopy2.62022-06-22
3047MT7|1|yTransfer RNAmRNA, tRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P and E site tRNAsElectron microscopy2.712022-02-02
3057MT7|1|xTransfer RNAtRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P and E site tRNAsElectron microscopy2.712022-02-02
3068CF5|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinElectron microscopy2.712023-09-20
3078CDL|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF0000580S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complexElectron microscopy2.722023-09-20
3088G5Z|1|PtTransfer RNAmRNA, P-site tRNA fMetEscherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)Electron microscopy2.642023-04-19
3097MT2|1|yTransfer RNAinitiator tRNA (Met), mRNAEscherichia coliBacteriaRF00005Mtb 70S initiation complexElectron microscopy2.762022-02-02
3106XZA|1|f2Transfer RNADeacylated tRNAi(Met)Escherichia coli K-12BacteriaRF00005E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.662020-11-04
3118P16|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure I)Electron microscopy2.772024-05-22
3128P18|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure III)Electron microscopy2.772024-05-22
3137MT3|1|yTransfer RNAmRNA, tRNA (Met)Escherichia coliBacteriaRF00005Mtb 70S with P/E tRNAElectron microscopy2.82022-02-02
3148P17|1|5Transfer RNAmRNA, tRNA(fMet)Escherichia coliBacteriaRF00005E167K RF2 on E. coli 70S release complex with UGG (Structure II)Electron microscopy2.782024-05-22
3158CVM|1|CTransfer RNAInitiator fMet RNAEscherichia coliBacteriaRF00005Cutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined mapElectron microscopy2.662023-03-15
3167UNV|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)Electron microscopy2.72022-06-22
3178EKC|1|xTransfer RNAM-F-Stop mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.72022-12-07
3187NWT|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.662021-12-15
3196AZ1|1|3Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinElectron microscopy2.72017-12-06
3208BHJ|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.812023-08-16
3218BGH|1|4Transfer RNAAcylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.882023-08-16
3228CRX|1|CTransfer RNA32MF mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Cutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline boundElectron microscopy2.782023-03-22
3237TOR|1|ETRNTransfer RNAtRNAfMet bound to E-siteEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.92022-05-25
3247ST2|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.92022-02-23
3258G7R|1|xTransfer RNAM-I mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)Electron microscopy2.82024-03-06
3268AM9|1|YTransfer RNAInitiator tRNA, mRNAEscherichia coli BW25113BacteriaRF00005Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeElectron microscopy2.82023-03-08
3276Y69|1|wTransfer RNAE-site tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.862020-07-01
3287M5D|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)Electron microscopy2.82022-10-19
3297TOR|1|PTRNTransfer RNAmRNA, tRNAfMet bound to E-siteEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20Electron microscopy2.92022-05-25
3305AFI|1|vTransfer RNAmRNA, P-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
3315AFI|1|wTransfer RNAP-site fMet-tRNAfMetEscherichia coliBacteriaRF000052.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
3326WDE|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
3337ST6|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
3346H4N|1|wTransfer RNAtRNAEscherichia coliBacteriaRF00005Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
3356WD0|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy32020-07-01
3366WDE|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
3376WD0|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy32020-07-01
3387ST6|1|7Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
3397UNU|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)Electron microscopy2.92022-06-22
3408G7P|1|xTransfer RNAM-I mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)Electron microscopy2.92024-03-06
3418SYL|1|xTransfer RNAM-F-Stop mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.92023-08-09
3427UNR|1|vTransfer RNAmRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Pseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)Electron microscopy2.92022-06-22
3438IFC|1|6Transfer RNAmRNA, P-site tRNAf-MetEscherichia coliBacteriaRF00005Arbekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.92024-02-14
3448B7Y|1|nTransfer RNAmessenger RNA, P-tRNA fMetEscherichia coli K-12BacteriaRF00005Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.Electron microscopy32023-01-25
3455H5U|1|5Transfer RNAmRNA, P-site tRNAEscherichia coliBacteriaRF00005Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
3468G61|1|PtTransfer RNAmRNA, RNA (77-MER)Escherichia coliBacteriaRF00005mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)Electron microscopy2.942023-04-19
3475J3C|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.042016-10-12
3485WDT|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
3495WFS|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
3505WDT|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
3515WFS|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
3526OPE|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-ray diffraction3.12020-06-24
3536OPE|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-ray diffraction3.12020-06-24
3547TOQ|1|PTRNTransfer RNARNA (5'-R(*CP*AP*CP*AP*UP*GP*UP*UP*CP*C)-3'), tRNAfMetEscherichia coli K-12BacteriaRF00005Mammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PRElectron microscopy3.12022-05-25
3556ORE|1|5Transfer RNAP-tRNA, RNA (5'-R(P*UP*UP*CP*UP*UP*CP*UP*AP*A)-3')Escherichia coliBacteriaRF00005Release complex 70SElectron microscopy2.92019-06-19
3568CKU|1|CcTransfer RNAMessenger RNA, Transfer RNA fMetEscherichia coliBacteriaRF00005Translocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarinElectron microscopy3.112023-09-20
3575J3C|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.042016-10-12
3586OTR|1|XVTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.122019-08-21
3596OTR|1|QVTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.122019-08-21
3606OTR|1|QWTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.122019-08-21
3616X7K|1|ATransfer RNAE-site and P-site tRNA (fMet)Escherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.12020-09-02
3628URY|1|ATransfer RNAE-site and P-site fMet-tRNAEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeElectron microscopy3.12024-06-12
3638URY|1|BTransfer RNAE-site and P-site fMet-tRNA, mRNA with 30 nt long spacerEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeElectron microscopy3.12024-06-12
3646X7K|1|BTransfer RNAE-site and P-site tRNA (fMet), mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.12020-09-02
3656ORD|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-ray diffraction3.12020-06-24
3665MDV|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
3676OTR|1|XWTransfer RNAtRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-ray diffraction3.122019-08-21
3686ORD|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-ray diffraction3.12020-06-24
3696BZ6|1|QVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-ray diffraction3.182018-11-14
3706ZTP|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32020-09-16
3716ZU1|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32020-09-16
3726ZTO|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32020-09-23
3735WE4|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
3747PJV|1|vTransfer RNAmRNA, P-site tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.12021-10-20
3757PJY|1|vTransfer RNAmRNA, P-site tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.12021-10-20
3765WE4|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
3777NBU|1|VTransfer RNAcspA mRNA, P-site fMet-tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.Electron microscopy3.112022-03-02
3785U9G|1|WTransfer RNAfMet-tRNA (P- and E-site), truncated mRNAEscherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
3797K53|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.22021-07-28
3806WNW|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.22020-06-24
3815UYM|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
3825U9F|1|WTransfer RNAfMet-tRNA (P- and E-site), truncated mRNAEscherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
3837ST7|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.22022-02-23
3847K54|1|6Transfer RNAtRNAfMetEscherichia coli K-12BacteriaRF00005Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.22021-07-28
3856WDD|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.22020-07-01
3865UQ8|1|yTransfer RNAP-site tRNA fMetEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)Electron microscopy3.22018-03-07
3875U9G|1|XTransfer RNAfMet-tRNA (P- and E-site)Escherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
3885U9F|1|XTransfer RNAfMet-tRNA (P- and E-site)Escherichia coliBacteriaRF000053.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
3895UYM|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
3907LV0|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.22021-07-28
3917SSN|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.22022-02-23
3927K53|1|6Transfer RNAtRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.22021-07-28
3937SSO|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.22022-02-23
3948G7Q|1|xTransfer RNAM-M mRNA, P-site initiator tRNAEscherichia coliBacteriaRF00005Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)Electron microscopy3.12024-03-06
3955MDW|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
3966BZ6|1|XVTransfer RNAmessenger RNA, tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-ray diffraction3.182018-11-14
3978UQL|1|ATransfer RNAE-site and P-site fMet-tRNAEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.22024-05-29
3986X6T|1|ATransfer RNAE-site and P-site tRNA (fMet)Escherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.22020-09-02
3998UQL|1|BTransfer RNAE-site and P-site fMet-tRNA, mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.22024-05-29
4006X6T|1|BTransfer RNAE-site and P-site tRNA (fMet), mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.22020-09-02
4016OJ2|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-ray diffraction3.22020-06-24
4026OF6|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-ray diffraction3.22020-06-24
4036WDD|1|6Transfer RNAtRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.22020-07-01
4046C4I|1|yTransfer RNAE-site or P-site tRNA fMetEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
4056C4I|1|xTransfer RNAE-site or P-site tRNA fMet, mRNAEscherichia coliBacteriaRF00005Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
4066OXA|1|XVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.252019-08-21
4076OXA|1|QWTransfer RNAP-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.252019-08-21
4088BHN|1|4Transfer RNADeacylated P-site tRNA(fMet), mRNAEscherichia coli K-12BacteriaRF00005Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.852023-08-16
4095J30|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.22016-10-12
4105J30|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S termination complex containing E. coli RF1X-ray diffraction3.22016-10-12
4116OF6|1|QVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-ray diffraction3.22020-06-24
4126OJ2|1|XVTransfer RNAmRNA, P-site tRNAfMetEscherichia coliBacteriaRF00005Crystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-ray diffraction3.22020-06-24
4135MDZ|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
4147JT1|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF0000570S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.32020-11-11
4157K55|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.32021-07-28
4167SSD|1|6Transfer RNAmRNA, tRNA fMetEscherichia coli K-12BacteriaRF00005Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.32022-02-23
4178AP4|1|ZTransfer RNAP-tRNAEscherichia coli K-12BacteriaRF00005Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAElectron microscopy32022-11-16
4186OXA|1|QVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.252019-08-21
4196WD1|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.32020-07-01
4206YEF|1|xTransfer RNAE-site tRNA, mRNAEscherichia coli DH5[alpha]BacteriaRF0000570S initiation complex with assigned rRNA modifications from Staphylococcus aureusElectron microscopy3.22021-01-27
4216OFX|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Non-rotated ribosome (Structure I)Electron microscopy3.32019-09-25
4226WDG|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.32020-07-01
4236OXA|1|XWTransfer RNAP-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-ray diffraction3.252019-08-21
4247K50|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.42021-07-28
4257K52|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.42021-07-28
4265ZEB|1|vTransfer RNAP-tRNAfMetEscherichia coliBacteriaRF00005M. Smegmatis P/P state 70S ribosome structureElectron microscopy3.42018-09-26
4277K50|1|6Transfer RNAtRNAfMetEscherichia coli K-12BacteriaRF00005Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.42021-07-28
4285ZEP|1|wTransfer RNAE-tRNAfMetEscherichia coliBacteriaRF00005M. smegmatis hibernating state 70S ribosome structureElectron microscopy3.42018-09-26
4296WDF|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF00005Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.32020-07-01
4306OG7|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.32019-09-25
4318A3L|1|WTransfer RNAE-site tRNAEscherichia coli K-12BacteriaRF00005Structural insights into the binding of bS1 to the ribosomeElectron microscopy3.422023-05-10
4328UR0|1|ATransfer RNAE-site and P-site fMet-tRNAEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.42024-05-29
4338UR0|1|BTransfer RNAE-site and P-site fMet-tRNA, mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.42024-05-29
4346OGI|1|5Transfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.42019-09-25
4355LZD|1|vTransfer RNAfMet-tRNAfMetEscherichia coliBacteriaRF00005Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
4365WE6|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
4375WFK|1|vTransfer RNAmRNA, tRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
4385WFK|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
4395WE6|1|wTransfer RNAtRNA-fMetEscherichia coliBacteriaRF0000570S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
4405MDY|1|5Transfer RNAfMet-NH-tRNA(fMet), mRNAEscherichia coliBacteriaRF00005Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
4416BU8|1|XTransfer RNAtRNAfMetEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
4427JT2|1|5Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF0000570S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.52020-11-11
4436BU8|1|WTransfer RNAmRNA, tRNAfMetEscherichia coliBacteriaRF0000570S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
4445U4I|1|yTransfer RNAP-site or E-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
4455UQ7|1|yTransfer RNAP-site tRNA fMetEscherichia coliBacteriaRF0000570S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)Electron microscopy3.52018-03-07
4467K51|1|6Transfer RNAmRNA, tRNAfMetEscherichia coli K-12BacteriaRF00005Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.52021-07-28
4475U4I|1|xTransfer RNAmRNA, P-site or E-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
4488A3L|1|VTransfer RNAP-site fMet-tRNA(fMet)Escherichia coli K-12BacteriaRF00005Structural insights into the binding of bS1 to the ribosomeElectron microscopy3.422023-05-10
4496X7F|1|ATransfer RNAE-site and P-site tRNA (fMet)Escherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.52020-09-02
4506X7F|1|BTransfer RNAE-site and P-site tRNA (fMet), mRNA with 24 nt long spacerEscherichia coliBacteriaRF00005Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.52020-09-02
4516OXI|1|XVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.492019-08-21
4526OXI|1|QVTransfer RNAmRNA, P-site tRNA-fMetEscherichia coliBacteriaRF00005Dimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-ray diffraction3.492019-08-21
4536BUW|1|XVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-ray diffraction3.52018-11-14
4546ZTJ|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.42020-09-16
4556ZTM|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.32020-09-16
4566BUW|1|QVTransfer RNAmessenger RNA, P-site tRNA fMetEscherichia coliBacteriaRF00005Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-ray diffraction3.52018-11-14
4576OSQ|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
4586SWC|1|4Transfer RNAinitiator Met-tRNA fMet from E. coli (A1U72 variant), mRNAEscherichia coliBacteriaRF00005IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiElectron microscopy3.32020-02-19
4596ORL|1|5Transfer RNAmRNA, P-tRNAEscherichia coliBacteriaRF00005RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
4605IQR|1|5Transfer RNAmRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF00005Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
4616ZTL|1|AWTransfer RNAmRNA, tRNA(fmet) P-siteEscherichia coliBacteriaRF00005E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.52020-09-16

Release history

Release3.3393.340
Date2024-06-122024-06-19

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
16AZ1|1|3Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycinELECTRON MICROSCOPY2.777
27LH5|1|AVCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2776
37M5D|1|5Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)ELECTRON MICROSCOPY2.871
46OSQ|1|5RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.571
56ORE|1|5Release complex 70SELECTRON MICROSCOPY2.971
66ORL|1|5RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.571
75IQR|1|5Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY372
85MDY|1|5Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.3570
95MDW|1|5Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.0670
105MDV|1|5Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.9770
115MDZ|1|5Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.170
127NWT|1|5Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.6670
136C4I|1|xConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.2477
147SA4|1|5Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.5577
154V5C|1|CVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
168CRX|1|CCutibacterium acnes 70S ribosome with mRNA, P-site tRNA and Sarecycline boundELECTRON MICROSCOPY2.7872
178CVM|1|CCutibacterium acnes 50S ribosomal subunit with P-site tRNA and Sarecycline bound in the local refined mapELECTRON MICROSCOPY2.6672
186ZTJ|1|AWE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.472
196XZ7|1|fE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.172
206XZA|1|f2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.6672
215U9F|1|W3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.277
226OG7|1|570S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.375
238AM9|1|YCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeELECTRON MICROSCOPY2.872
248B7Y|1|nCryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.ELECTRON MICROSCOPY376
258G61|1|PtmRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)ELECTRON MICROSCOPY2.9472
268IFB|1|6Dibekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.4372
278IFC|1|6Arbekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.972
288B0X|1|ZTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.5575
298BGH|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.8877
308BIM|1|4Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteELECTRON MICROSCOPY2.0477
318BIL|1|4Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.ELECTRON MICROSCOPY2.0477
328BHP|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.3777
338BGE|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.1177
348BHL|1|4Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.2177
358BHJ|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.8174
368BH4|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.6274
378BF7|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.3374
388BHN|1|4Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.8574
396B4V|1|MCAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.473
406B4V|1|IAAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.473
416BOH|1|IAAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.473
426BOH|1|NCAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.473
437TOR|1|PTRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.974
446WDD|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.277
456OFX|1|5Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.377
466OPE|1|XVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-RAY DIFFRACTION3.177
476OPE|1|QVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to near-cognate 70S A siteX-RAY DIFFRACTION3.177
486ORD|1|QVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-RAY DIFFRACTION3.177
496OJ2|1|QVCrystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-RAY DIFFRACTION3.277
506OJ2|1|XVCrystal structure of tRNA^ Ala(GGC) bound to the near-cognate 70S A-siteX-RAY DIFFRACTION3.277
516ORD|1|XVCrystal structure of tRNA^ Ala(GGC) U32-A38 bound to cognate 70S A siteX-RAY DIFFRACTION3.177
527LH5|1|CVCrystal structure of the Thermus thermophilus 70S ribosome in complex with plazomicin, mRNA and tRNAsX-RAY DIFFRACTION3.2777
534V5K|1|CVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
545U9G|1|W3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.277
556BU8|1|W70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.577
565UYM|1|W70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.277
576WDE|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
586WD0|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
595U4I|1|xStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.577
607K50|1|5Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.477
617K53|1|5Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.277
621VY7|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
634V7L|1|CXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
644V7L|1|AXThe structures of viomycin bound to the 70S ribosome.X-RAY DIFFRACTION377
654V7M|1|AXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
664V7M|1|CXThe structures of Capreomycin bound to the 70S ribosome.X-RAY DIFFRACTION3.4577
674V5C|1|AVStructure of the Thermus thermophilus 70S ribosome in complex with mRNA, paromomycin, acylated A-site tRNA, deacylated P-site tRNA, and E-site tRNA.X-RAY DIFFRACTION3.376
684V9I|1|CVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
694V51|1|AVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
704V51|1|CVStructure of the Thermus thermophilus 70S ribosome complexed with mRNA, tRNA and paromomycinX-RAY DIFFRACTION2.876
714V9I|1|AVCrystal structure of thermus thermophilus 70S in complex with tRNAs and mRNA containing a pseudouridine in a stop codonX-RAY DIFFRACTION3.377
724V6A|1|AWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
734V6A|1|CWStructure of EF-P bound to the 70S ribosome.X-RAY DIFFRACTION3.177
745WIT|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
756OF1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.872
764W2I|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
774W2H|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
784V9R|1|CXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
794V9S|1|CXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
804WQY|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
814WPO|1|DXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
821VY6|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
831VY4|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
841VY5|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
854W2G|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
864W2F|1|CXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
875J4C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
885J4B|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
895W4K|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.772
905WIS|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.772
914Y4P|1|2xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
928EV6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94672
938EV7|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8972
946ND6|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8572
956O97|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7572
966CAE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
976ND5|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.672
985DOY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
994Z3S|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
1005VP2|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
1017JQL|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION372
1027JQM|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-RAY DIFFRACTION3.0572
1036UO1|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9572
1044V63|1|AYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1054V63|1|CYStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
1066OF6|1|XVCrystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-RAY DIFFRACTION3.277
1076OF6|1|QVCrystal structure of tRNA^ Ala(GGC) bound to cognate 70S A-siteX-RAY DIFFRACTION3.277
1081VVJ|1|QVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1091VVJ|1|XVCrystal Structure of Frameshift Suppressor tRNA SufA6 bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.4477
1104LSK|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1114LSK|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCG-G on the RibosomeX-RAY DIFFRACTION3.4877
1124LT8|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
1134LNT|1|XVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1144LNT|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-U on the RibosomeX-RAY DIFFRACTION2.9477
1154LT8|1|QVCrystal Structure of tRNA Proline (CGG) Bound to Codon CCC-G on the RibosomeX-RAY DIFFRACTION3.1477
1165CZP|1|QV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.377
1175DFE|1|QV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.177
1185J3C|1|QVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.0477
1195J30|1|QVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.277
1204V67|1|AYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1214V67|1|CYCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
1224V8Q|1|BVComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
1234W4G|1|XVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1244YPB|1|XVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1254YZV|1|XVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1264YZV|1|QVPrecleavage 70S structure of the P. vulgaris HigB deltaH92 toxin bound to the ACA codonX-RAY DIFFRACTION3.177
1274W4G|1|QVPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
1284YPB|1|QVPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
1296BUW|1|QVThermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-RAY DIFFRACTION3.577
1306BZ6|1|XVThermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-RAY DIFFRACTION3.1877
1316BZ6|1|QVThermus thermophilus 70S complex containing 16S G347U ram mutation and empty A siteX-RAY DIFFRACTION3.1877
1326BUW|1|XVThermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.X-RAY DIFFRACTION3.577
1337MT2|1|yMtb 70S initiation complexELECTRON MICROSCOPY2.7677
1347MT7|1|yMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.7177
1355H5U|1|5Mechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.0176
1366YEF|1|x70S initiation complex with assigned rRNA modifications from Staphylococcus aureusELECTRON MICROSCOPY3.270
1374V6G|1|ACInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
1386QNQ|1|2L70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.572
1395UQ7|1|y70S ribosome complex with dnaX mRNA stemloop and E-site tRNA ('in' conformation)ELECTRON MICROSCOPY3.577
1405UQ8|1|y70S ribosome complex with dnaX mRNA stem-loop and E-site tRNA ('out' conformation)ELECTRON MICROSCOPY3.277
1417JT2|1|570S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.577
1427JT1|1|570S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.377
1438G5Z|1|PtmRNA decoding in human is kinetically and structurally distinct from bacteria (GA state)ELECTRON MICROSCOPY2.6472
1445CZP|1|XV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.377
1455DFE|1|XV70S termination complex containing E. coli RF2X-RAY DIFFRACTION3.177
1465J30|1|XVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.277
1475J3C|1|XVThermus thermophilus 70S termination complex containing E. coli RF1X-RAY DIFFRACTION3.0477
1488P2F|1|FStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateELECTRON MICROSCOPY2.4476
1494V5K|1|AVStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
1506ZTP|1|AWE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY372
1516ZTO|1|AWE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY372
1526ZU1|1|AWE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY372
1536ZTM|1|AWE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.372
1546ZTL|1|AWE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.572
1555WFS|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY373
1565WDT|1|v70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY373
1575WFK|1|v70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.473
1585WE6|1|v70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.473
1595WE4|1|v70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.173
1605ZEB|1|vM. Smegmatis P/P state 70S ribosome structureELECTRON MICROSCOPY3.477
1615AFI|1|v2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
1625LZD|1|vStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.473
1635J4D|1|NCE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
1645J4D|1|IAE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
1655F8K|1|2xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1664ZER|1|2xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
1674ZER|1|1xCrystal structure of the Onc112 antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION3.172
1685F8K|1|1xCrystal structure of the Bac7(1-16) antimicrobial peptide bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1697JQM|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-002, mRNA, and deacylated P-site tRNA at 3.05A resolutionX-RAY DIFFRACTION3.0572
1707JQL|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Bac7-001, mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION372
1715VP2|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with madumycin II and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
1726UO1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA (containing pseudouridine at the first position of the codon) and deacylated A-, P-, and E-site tRNAs at 2.95A resolutionX-RAY DIFFRACTION2.9572
1731VY4|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing acylated tRNA-substrates in the A and P sites.X-RAY DIFFRACTION2.671
1741VY5|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the post-catalysis state of peptide bond formation containing dipeptydil-tRNA in the A site and deacylated tRNA in the P site.X-RAY DIFFRACTION2.5572
1756XZB|1|f2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.5472
1764W2G|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (soaked), mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.5572
1771VY7|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.871
1781VY6|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in the pre-attack state of peptide bond formation containing short substrate-mimic Cytidine-Puromycin in the A site and acylated tRNA in the P site.X-RAY DIFFRACTION2.971
1794WPO|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational stateX-RAY DIFFRACTION2.871
1804WQY|1|BXCrystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)X-RAY DIFFRACTION2.872
1814V9R|1|AXCrystal structure of antibiotic DITYROMYCIN bound to 70S ribosomeX-RAY DIFFRACTION376
1824V9S|1|AXCrystal structure of antibiotic GE82832 bound to 70S ribosomeX-RAY DIFFRACTION3.176
1834W2I|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with negamycin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.772
1845HCQ|1|2xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1854Z8C|1|2xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
1865HCP|1|2xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
1875HCR|1|2xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1885HD1|1|2xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
1895HD1|1|1xCrystal structure of antimicrobial peptide Pyrrhocoricin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.772
1905HCR|1|1xCrystal structure of antimicrobial peptide Oncocin 10wt bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1915HCP|1|1xCrystal structure of antimicrobial peptide Metalnikowin bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.8972
1925HCQ|1|1xCrystal structure of antimicrobial peptide Oncocin d15-19 bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION2.872
1934Z8C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome bound to translation inhibitor oncocinX-RAY DIFFRACTION2.972
1945HAU|1|2wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
1955HAU|1|1wCrystal structure of antimicrobial peptide Bac7(1-19) bound to the Thermus thermophilus 70S ribosomeX-RAY DIFFRACTION372
1965DOY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic Hygromycin A, mRNA and three tRNAs in the A, P and E sites at 2.6A resolutionX-RAY DIFFRACTION2.671
1974Z3S|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with antibiotic A201A, mRNA and three tRNAs in the A, P and E sites at 2.65A resolutionX-RAY DIFFRACTION2.6571
1985EL6|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
1995IBB|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9671
2005IB8|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1372
2015IB7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9972
2026GSJ|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9672
2036GSK|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-RAY DIFFRACTION3.3675
2045E7K|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
2055EL5|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
2066GSL|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-RAY DIFFRACTION3.1672
2075EL7|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
2085EL4|1|2LStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1571
2094WZO|1|2LComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.373
2104WRO|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
2114WSD|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
2124WT1|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
2134WQR|1|2LComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
2144WRA|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
2154WR6|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0572
2164WQ1|1|2LComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
2174V8D|1|CCStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
2184V8D|1|ACStructure analysis of ribosomal decoding (cognate tRNA-tyr complex).X-RAY DIFFRACTION377
2194V8F|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
2204V8E|1|BCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
2214V8E|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-tyr complex).X-RAY DIFFRACTION3.377
2224V8F|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).X-RAY DIFFRACTION3.377
2234WZO|1|2KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.372
2245EL5|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second positionX-RAY DIFFRACTION3.1572
2256GSL|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAArg in the A-siteX-RAY DIFFRACTION3.1672
2265E7K|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and cognate tRNALys in the A-siteX-RAY DIFFRACTION3.272
2275EL6|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first position and antibiotic paromomycinX-RAY DIFFRACTION3.172
2285EL7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the second position and antibiotic paromomycinX-RAY DIFFRACTION3.1572
2294WSD|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION2.9572
2304WRA|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.X-RAY DIFFRACTION3.0573
2314WR6|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.0571
2324WT1|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
2334WQR|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.1572
2344WRO|1|2KComplex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the second position in the A-siteX-RAY DIFFRACTION3.0572
2354WQ1|1|2KComplex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.X-RAY DIFFRACTION3.172
2365IBB|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAVal in the A-siteX-RAY DIFFRACTION2.9672
2376GSJ|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and cognate tRNAThr in the A-siteX-RAY DIFFRACTION2.9672
2385IB7|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet, near-cognate tRNALys with U-G mismatch in the A-site and antibiotic paromomycinX-RAY DIFFRACTION2.9972
2395IB8|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-siteX-RAY DIFFRACTION3.1372
2405EL4|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA and tRNALys in the A-site with a U-U mismatch in the first positionX-RAY DIFFRACTION3.1572
2416GSK|1|2KStructure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNAThr in the A-siteX-RAY DIFFRACTION3.3675
2424V8B|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
2434V87|1|CCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
2444V8C|1|DCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
2454V8C|1|CCCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
2464V87|1|BCCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
2474V8B|1|ACCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
2484V6G|1|CCInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
2496QNQ|1|2K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.571
2506OXI|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.4977
2516OTR|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
2526OXA|1|QVDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
2536OXA|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
2546OTR|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
2556OXI|1|XVDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (UAA)X-RAY DIFFRACTION3.4977
2566XQD|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.872
2578G2D|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.772
2588G2D|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.70A resolutionX-RAY DIFFRACTION2.772
2598EKB|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-RAY DIFFRACTION2.772
2608UD8|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.671
2618UD6|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.771
2628UD7|1|1xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5571
2638G2B|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5571
2648UD6|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.771
2658UD7|1|2xCrystal structure of the A2058-N6-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.5571
2668G2B|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAphe, and aminoacylated P-site fMet-tRNAmet at 2.55A resolutionX-RAY DIFFRACTION2.5571
2678UD8|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with cresomycin, mRNA, deacylated A-site tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.70A resolutionX-RAY DIFFRACTION2.671
2688EKB|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, deacylated P-site tRNAmet, and thermorubin at 2.70A resolutionX-RAY DIFFRACTION2.772
2697RQ9|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.671
2707RQ8|1|2xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
2716XQE|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION372
2726XQE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UAA-mRNA, and deacylated P-site tRNA at 3.00A resolutionX-RAY DIFFRACTION372
2734W2H|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with pactamycin (co-crystallized), mRNA and deacylated tRNA in the P siteX-RAY DIFFRACTION2.772
2747RQ9|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.671
2757RQ8|1|1xCrystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with iboxamycin, mRNA, deacylated A- and E-site tRNAs, and aminoacylated P-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
2766ND5|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with chloramphenicol and bound to mRNA and A-, P-, and E-site tRNAs at 2.60A resolutionX-RAY DIFFRACTION2.672
2776XQD|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with sarecycline, UUC-mRNA, and deacylated P-site tRNA at 2.80A resolutionX-RAY DIFFRACTION2.872
2786ND6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with erythromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.85A resolutionX-RAY DIFFRACTION2.8572
2796O97|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with propylamycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.75A resolutionX-RAY DIFFRACTION2.7572
2806CAE|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with NOSO-95179 antibiotic and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
2816OF1|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with dirithromycin and bound to mRNA and A-, P-, and E-site tRNAs at 2.80A resolutionX-RAY DIFFRACTION2.872
2825W4K|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with Klebsazolicin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.772
2835WIS|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with methymycin and bound to mRNA and A-, P- and E-site tRNAs at 2.7A resolutionX-RAY DIFFRACTION2.772
2844Y4P|1|1xCrystal structure of the Thermus thermophilus 70S ribosome with rRNA modifications and bound to mRNA and A-, P- and E-site tRNAs at 2.5A resolutionX-RAY DIFFRACTION2.572
2855J4B|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (co-crystallized) and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
2865J4C|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with cisplatin (soaked) and bound to mRNA and A-, P- and E-site tRNAs at 2.8A resolutionX-RAY DIFFRACTION2.872
2874W2F|1|AXCrystal structure of the Thermus thermophilus 70S ribosome in complex with amicoumacin, mRNA and three deacylated tRNAs in the A, P and E sitesX-RAY DIFFRACTION2.472
2885WIT|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with pikromycin and bound to mRNA and A-, P- and E-site tRNAs at 2.6A resolutionX-RAY DIFFRACTION2.672
2897U2J|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5572
2907U2H|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-RAY DIFFRACTION2.5572
2917U2I|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5572
2928G2C|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6572
2938G29|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5572
2948G2A|1|2xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4572
2958CVL|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.372
2968CVK|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.572
2978CVJ|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.472
2986XHW|1|2xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
2996XHY|1|2xCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.671
3006XHV|1|2xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.471
3016XHV|1|1xCrystal structure of the A2058-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.40A resolutionX-RAY DIFFRACTION2.471
3026XHY|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with telithromycin, mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.60A resolutionX-RAY DIFFRACTION2.671
3038CVL|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMTHSMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.30A resolutionX-RAY DIFFRACTION2.372
3046XHW|1|1xCrystal structure of the A2058-unmethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A- and P-site tRNAs, and deacylated E-site tRNA at 2.50A resolutionX-RAY DIFFRACTION2.571
3058CVK|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMRC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.50A resolutionX-RAY DIFFRACTION2.572
3068CVJ|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-NH-tRNAphe, peptidyl P-site fMSEAC-NH-tRNAmet, and deacylated E-site tRNAphe at 2.40A resolutionX-RAY DIFFRACTION2.472
3077U2I|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5572
3087U2H|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, aminoacylated P-site fMet-NH-tRNAmet, and deacylated E-site tRNAgly at 2.55A resolutionX-RAY DIFFRACTION2.5572
3097U2J|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Gly-NH-tRNAgly, peptidyl P-site fMAC-NH-tRNAmet, deacylated E-site tRNAgly, and chloramphenicol at 2.55A resolutionX-RAY DIFFRACTION2.5572
3108G2A|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, peptidyl P-site fMTHSMRC-tRNAmet, and deacylated E-site tRNAphe at 2.45A resolutionX-RAY DIFFRACTION2.4572
3118G29|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolutionX-RAY DIFFRACTION2.5572
3128G2C|1|1xCrystal structure of the A2503-C2,C8-dimethylated Thermus thermophilus 70S ribosome in complex with tylosin, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.65A resolutionX-RAY DIFFRACTION2.6572
3138EV7|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with kanamycin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.8972
3148EV6|1|1xCrystal structure of the Thermus thermophilus 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsX-RAY DIFFRACTION2.94672
3158SYL|1|xCryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.972
3167Y7D|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.5872
3177Y7F|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)ELECTRON MICROSCOPY2.4372
3187Y7C|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)ELECTRON MICROSCOPY2.5172
3197Y7E|1|ZStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.4172
3207Y7G|1|ZStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)ELECTRON MICROSCOPY2.3472
3217Y7H|1|ZStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)ELECTRON MICROSCOPY2.5172
3228EIU|1|ZE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.2474
3238EMM|1|ZComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.175
3248FTO|1|ZE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.8575
3258P18|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure III)ELECTRON MICROSCOPY2.7778
3268P16|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure I)ELECTRON MICROSCOPY2.7776
3278P17|1|5E167K RF2 on E. coli 70S release complex with UGG (Structure II)ELECTRON MICROSCOPY2.7878
3288AYE|1|ZE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.9676
3297K00|1|ZStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.9876
3307ST6|1|6Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
3318A3L|1|VStructural insights into the binding of bS1 to the ribosomeELECTRON MICROSCOPY3.4273
3327NBU|1|VStructure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.ELECTRON MICROSCOPY3.1173
3336WNW|1|5Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.277
3347UNU|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-B)ELECTRON MICROSCOPY2.972
3357UNR|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to compact IF2-GDP (composite structure I-A)ELECTRON MICROSCOPY2.972
3368EKC|1|xEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.772
3378G7Q|1|xStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)ELECTRON MICROSCOPY3.172
3388G7P|1|xStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)ELECTRON MICROSCOPY2.972
3398G7R|1|xStructure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)ELECTRON MICROSCOPY2.872
3408G6Y|1|ZStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0975
3418G6X|1|ZStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.3175
3428G6W|1|ZStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.0275
3438EMM|1|YComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.175
3448EIU|1|YE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.2474
3458CGN|1|BbNon-rotated 80S S. cerevisiae ribosome with ligandsELECTRON MICROSCOPY2.2877
3468A3L|1|WStructural insights into the binding of bS1 to the ribosomeELECTRON MICROSCOPY3.4277
3478AP4|1|ZStructure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAELECTRON MICROSCOPY371
3486SWC|1|4IC2B model of cryo-EM structure of a full archaeal ribosomal translation initiation complex devoid of aIF1 in P. abyssiELECTRON MICROSCOPY3.371
3494V6G|1|CBInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.565
3506QNQ|1|1K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.565
3514WZO|1|1KComplex of 70S ribosome with tRNA-fMet and mRNAX-RAY DIFFRACTION3.368
3527ST2|1|6Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.977
3537K54|1|6Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.277
3547K51|1|6Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.577
3558P2F|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane in post-translocational stateELECTRON MICROSCOPY2.4477
3568P2H|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid with a tRNA in pe/E chimeric stateELECTRON MICROSCOPY2.4977
3578P2G|1|DStaphylococcus aureus 70S ribosome with elongation factor G locked with fusidic acid cyclopentane with a tRNA in pe/E chimeric stateELECTRON MICROSCOPY2.0277
3587SSD|1|6Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.377
3597UG7|1|Dt70S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.5872
3607PJY|1|vStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.173
3617LV0|1|6Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.277
3627PJV|1|vStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.173
3637OSA|1|PSITPre-translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION377
3647TOO|1|APTNYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.777
3657TOP|1|APTNYeast 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.477
3666OGI|1|570S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.474
3676WD1|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.377
3686WDF|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.377
3696WDG|1|5Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.377
3707ST7|1|6Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.277
3717SSN|1|6Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.277
3727SSO|1|6Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.277
3737MT3|1|yMtb 70S with P/E tRNAELECTRON MICROSCOPY2.877
3747TOQ|1|PTRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein poly-PRELECTRON MICROSCOPY3.177
3758CDL|1|Cc80S S. cerevisiae ribosome with ligands in hybrid-2 pre-translocation (PRE-H2) complexELECTRON MICROSCOPY2.7277
3768CCS|1|Cc80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complexELECTRON MICROSCOPY1.9777
3778CF5|1|CcTranslocation intermediate 1 (TI-1) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.7177
3788CKU|1|CcTranslocation intermediate 1 (TI-1*) of 80S S. cerevisiae ribosome with ligands and eEF2 in the absence of sordarinELECTRON MICROSCOPY3.1177
3797OSM|1|PSITIntermediate translocation complex of 80 S.cerevisiae ribosome with eEF2 and ligandsX-RAY DIFFRACTION377
3808CG8|1|CcTranslocation intermediate 3 (TI-3) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.5777
3818CDR|1|CcTranslocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.0477
3828CEH|1|CcTranslocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.0577
3838CIV|1|CcTranslocation intermediate 5 (TI-5) of 80S S. cerevisiae ribosome with ligands and eEF2 in the presence of sordarinELECTRON MICROSCOPY2.4777
3848CGN|1|CcNon-rotated 80S S. cerevisiae ribosome with ligandsELECTRON MICROSCOPY2.2877
3857ST6|1|7Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY377
3867K50|1|6Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.477
3877K53|1|6Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.277
3887K55|1|6Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.377
3897K52|1|6Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.477
3905ZEP|1|wM. smegmatis hibernating state 70S ribosome structureELECTRON MICROSCOPY3.477
3915WFS|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY373
3925AFI|1|w2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.973
3935WFK|1|w70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.473
3945WE6|1|w70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.473
3955WDT|1|w70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY373
3965WE4|1|w70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.173
3975UYM|1|X70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.277
3986WD0|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY377
3996BU8|1|X70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.577
4005U9G|1|X3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.277
4015U9F|1|X3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.277
4026Y69|1|wCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.8674
4036H4N|1|wStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY377
4047TOR|1|ETRNMammalian 80S ribosome bound with the ALS/FTD-associated dipeptide repeat protein GR20ELECTRON MICROSCOPY2.977
4056WDD|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.277
4066WDE|1|6Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY377
4074V5K|1|CWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
4084V5K|1|AWStructure of cytotoxic domain of colicin E3 bound to the 70S ribosomeX-RAY DIFFRACTION3.277
4094V5A|1|AWStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.576
4104V5A|1|CWStructure of the Ribosome Recycling Factor bound to the Thermus thermophilus 70S ribosome with mRNA, ASL-Phe and tRNA-fMetX-RAY DIFFRACTION3.576
4117SA4|1|6Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.5577
4126C4I|1|yConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.2477
4135U4I|1|yStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.577
4147MT7|1|xMtb 70S with P and E site tRNAsELECTRON MICROSCOPY2.7177
4156OTR|1|QWDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
4166OXA|1|QWDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
4174W4G|1|QWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
4184YPB|1|QWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
4196OTR|1|XWDimeric E.coli YoeB bound to Thermus thermophilus 70S post-cleavage (AAU)X-RAY DIFFRACTION3.1277
4206OXA|1|XWDimeric E.coli YoeB bound to Thermus thermophilus 70S pre-cleavage (AAU)X-RAY DIFFRACTION3.2577
4214YPB|1|XWPrecleavage 70S structure of the P. vulgaris HigB DeltaH92 toxin bound to the AAA codonX-RAY DIFFRACTION3.477
4224W4G|1|XWPostcleavage state of 70S bound to HigB toxin and AAA (lysine) codonX-RAY DIFFRACTION3.377
4234V6G|1|CDInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
4246QNQ|1|3K70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
4254V87|1|BDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
4264V8B|1|ADCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
4274V8C|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
4284V8C|1|DDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).X-RAY DIFFRACTION3.377
4294V8B|1|CDCrystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).X-RAY DIFFRACTION377
4304V87|1|CDCrystal structure analysis of ribosomal decoding.X-RAY DIFFRACTION3.177
4314V67|1|AZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
4324V67|1|CZCrystal structure of a translation termination complex formed with release factor RF2.X-RAY DIFFRACTION377
4334V63|1|AZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
4344V63|1|CZStructural basis for translation termination on the 70S ribosome.X-RAY DIFFRACTION3.2177
4354V8Q|1|BWComplex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosomeX-RAY DIFFRACTION3.177
4365J4D|1|DE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
4375J4D|1|IBE. coli release factor 1 bound to the 70S ribosome in response to a pseudouridylated stop codonX-RAY DIFFRACTION3.173
4386B4V|1|DAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.473
4396B4V|1|HBAntibiotic blasticidin S and E. coli release factor 1 bound to the 70S ribosomeX-RAY DIFFRACTION3.473
4406BOH|1|DAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.473
4416BOH|1|IBAntibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosomeX-RAY DIFFRACTION3.473
4426QNQ|1|3L70S ribosome initiation complex (IC) with experimentally assigned potassium ionsX-RAY DIFFRACTION3.577
4434V6G|1|ADInitiation complex of 70S ribosome with two tRNAs and mRNA.X-RAY DIFFRACTION3.577
4446X7F|1|ACryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.576
4456X7K|1|ACryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.176
4466X6T|1|ACryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.276
4478UR0|1|BEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.476
4488UQL|1|BEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.276
4498URY|1|BEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.176
4508URY|1|AEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.176
4518UR0|1|AEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.476
4528UQL|1|AEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.276
4536X6T|1|BCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.276
4546X7F|1|BCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.576
4556X7K|1|BCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.176
4563CW6|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.372
4573CW5|1|AE. coli Initiator tRNAX-RAY DIFFRACTION3.172
4585L4O|1|AStructure of an E.coli initiator tRNAfMet A1-U72 variantX-RAY DIFFRACTION2.871
4597UNV|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-A)ELECTRON MICROSCOPY2.772
4607UNW|1|vPseudomonas aeruginosa 70S ribosome initiation complex bound to IF2-GDPCP (structure II-B)ELECTRON MICROSCOPY2.672
4613QSY|1|DRecognition of the methionylated initiator tRNA by the translation initiation factor 2 in ArchaeaX-RAY DIFFRACTION3.277

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.