#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
15J7L|1|AA (rep)Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
24YBB|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
35J8A|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
45JC9|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
54WOI|1|DASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
64WOI|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNAEscherichia coliBacteriaRF001774,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction32015-08-05
75IT8|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
84V9P|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
94V9O|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
105J7L|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction32016-07-27
114V9P|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
124V9P|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
134V9P|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
145J8A|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.12016-07-06
154V9O|1|FASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
165J91|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
176I7V|1|AASmall subunit ribosomal RNA16S ribosmal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
184V6C|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
195JC9|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.032016-07-06
204V52|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
214V9O|1|DASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
224V7T|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
234V57|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
244WWW|1|QASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
256LKQ|1|sSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.12020-05-06
264V52|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.212014-07-09
274V57|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.52014-07-09
284U27|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
295J88|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
304V7V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
314V54|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
324WF1|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
334YBB|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.12015-03-18
344U1U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
354V64|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
364U26|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
374V9D|1|AASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
386I7V|1|BASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.92018-12-05
394U24|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
404V7S|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
414U25|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
425IT8|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.122016-07-27
434V9D|1|BASmall subunit ribosomal RNA16S rRNA, messenger RNAEscherichia coliBacteriaRF00177Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction32014-07-09
444V54|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.32014-07-09
454U27|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.82014-07-30
464V64|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.52014-07-09
474V7U|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
484V50|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
494V9O|1|HASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.92014-07-09
504WWW|1|XASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.12014-12-24
514V4Q|1|CASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
524U20|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
534U1U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.952014-07-30
544V50|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.222014-07-09
554U1V|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
564U25|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.92014-07-30
574V6C|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.192014-07-09
585J88|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.322016-07-06
594V4Q|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.462014-07-09
604U26|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.82014-07-30
614V85|1|AA16S rRNACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.22014-07-09
625J91|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.962016-07-06
634V7T|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.192014-07-09
644WF1|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.092014-11-05
654U24|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.92014-07-30
664U1V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction32014-07-30
674U20|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.92014-07-30
684V7S|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.252014-07-09
694V7V|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.292014-07-09
704V9C|1|CASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
714V9C|1|AASmall subunit ribosomal RNA16S ribosomal RNA, Messenger RNA, mRNAEscherichia coliBacteriaRF00177Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.32014-07-09
724V7U|1|CASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.12014-07-09
735J5B|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
744V4H|1|CASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
754V4H|1|AASmall subunit ribosomal RNA16S RIBOSOMAL RNAEscherichia coliBacteriaRF00177Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.462014-07-09
765J5B|1|BASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.82016-07-27
778B0X|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BBacteriaRF00177Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.552022-11-30
787K00|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.982020-09-23
798EIU|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.242023-02-01
807S1H|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.352021-11-17
817N1P|1|16Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.332021-07-14
827S1K|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.422022-01-19
837S1J|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Wild-type Escherichia coli ribosome with antibiotic radezolidElectron microscopy2.472022-03-02
847O1A|1|AASmall subunit ribosomal RNARibosomal RNA 16SEscherichia coli K-12BacteriaRF00177Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.42021-09-01
857S1I|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.482022-03-02
867S1G|1|CSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.482021-11-17
877N2U|1|16Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.532021-07-14
887N2V|1|16Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.542021-07-14
897SA4|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Damaged 70S ribosome with PrfH boundElectron microscopy2.552022-08-03
906YSS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.62020-08-19
917UG7|1|16Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.582022-05-18
926XZB|1|A1Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.542020-11-04
937NWT|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.662021-12-15
947N30|1|16Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.662021-07-14
957N31|1|16Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.692021-07-14
966TC3|1|16S1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.72020-01-01
976TBV|1|16S1Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.72020-01-01
988EKC|1|aSmall subunit ribosomal RNA16S Ribosomal RNAEscherichia coliBacteriaRF00177Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.72022-12-07
997N2C|1|16Small subunit ribosomal RNA16S rRNA, Chains: mREscherichia coli K-12BacteriaRF00177Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.722021-07-14
1006XZA|1|A1Small subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.662020-11-04
1017M5D|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)Electron microscopy2.82022-10-19
1027O1C|1|AASmall subunit ribosomal RNARibosomal RNA 16SEscherichia coli K-12BacteriaRF00177Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanElectron microscopy2.62021-09-01
1036Y69|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.862020-07-01
1047NSO|1|aSmall subunit ribosomal RNA16S rRNA (1540-MER)Escherichia coliBacteriaRF00177Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.92021-07-14
1057ST2|1|3Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.92022-02-23
1065AFI|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF001772.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.92015-03-11
1077BOH|1|ASmall subunit ribosomal RNARNA (1527-MER)Escherichia coli K-12BacteriaRF00177Complete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)Electron microscopy2.822021-12-08
1087OT5|1|2Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177CspA-70 cotranslational folding intermediate 1Electron microscopy2.92022-01-19
1097OTC|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coli BL21(DE3)BacteriaRF00177Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BElectron microscopy2.92022-05-11
1107B5K|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.92021-05-26
1117OIZ|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Cryo-EM structure of 70S ribosome stalled with TnaC peptideElectron microscopy2.92021-09-15
1127P3K|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)Electron microscopy2.92021-10-27
1135NWY|1|0Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF001772.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.92017-07-19
1147ST6|1|3Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy32022-02-23
1156WD0|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy32020-07-01
1167TOS|1|16SSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.92022-05-25
1176H4N|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy32018-09-05
1186WDE|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy32020-07-01
1196ORE|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release complex 70SElectron microscopy2.92019-06-19
1205H5U|1|hSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.012017-01-25
1215WDT|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy32018-04-25
1225WFS|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy32018-05-02
1237O19|1|AASmall subunit ribosomal RNARibosomal RNA 16SEscherichia coli K-12BacteriaRF00177Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanElectron microscopy2.92021-09-01
1247OIF|1|2Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177CspA-27 cotranslational folding intermediate 2Electron microscopy32022-01-19
1257OII|1|2Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177CspA-70 cotranslational folding intermediate 2Electron microscopy32022-01-19
1268B7Y|1|CSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF00177Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.Electron microscopy32023-01-25
1277BOE|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)Electron microscopy2.92021-12-08
1286SZS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.062019-12-04
1297NWW|1|2Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177CspA-27 cotranslational folding intermediate 1Electron microscopy3.052022-01-19
1305MDV|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.972016-12-14
1317NSQ|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.12021-07-14
1325MGP|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.12016-12-14
1336ENU|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.12017-11-22
1347AC7|1|2Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.082021-08-18
1357Q4K|1|AASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainElectron microscopy32022-11-16
1367NAX|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Complete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)Electron microscopy2.962021-12-08
1377PJV|1|aSmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.12021-10-20
1385WE4|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.12018-04-25
1397PJY|1|aSmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.12021-10-20
1406YSR|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+9 stalled ribosome complexElectron microscopy3.12020-08-19
1416ZTP|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy32020-09-16
1426ZU1|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy32020-09-16
1436ZTO|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy32020-09-23
1446X7K|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.12020-09-02
1457NBU|1|ASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.Electron microscopy3.112022-03-02
1466OM6|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.12021-02-10
1477LV0|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.22021-07-28
1487K53|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.22021-07-28
1497SSO|1|3Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.22022-02-23
1507ST7|1|3Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.22022-02-23
1517K54|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.22021-07-28
1526ENF|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.22017-11-22
1537SSN|1|3Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.22022-02-23
1545U9G|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.22017-03-22
1556WNW|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.22020-06-24
1565U9F|1|ASmall subunit ribosomal RNA16S ribosomal RNA, truncated mRNAEscherichia coliBacteriaRF001773.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.22017-03-22
1576WDD|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.22020-07-01
1583JCE|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.22016-01-13
1595UYM|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.22017-06-07
1606YST|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.22020-08-19
1617ABZ|1|2Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.212021-08-18
1626X6T|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.22020-09-02
1635MDW|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.062016-12-14
1647OIG|1|2Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177CspA-27 cotranslational folding intermediate 3Electron microscopy3.22022-01-19
1657ACJ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF00177Structure of translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.22021-08-18
1665MDZ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome (empty A site)Electron microscopy3.12016-12-14
1677OE0|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177E. coli pre-30S delta rbfA ribosomal subunit class FElectron microscopy2.692021-07-14
1687NAR|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Complete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)Electron microscopy32021-12-08
1696C4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.242018-02-21
1707JT1|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF0017770S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.32020-11-11
1717K55|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.32021-07-28
1727SSD|1|3Small subunit ribosomal RNA16S rRNA, mRNAEscherichia coli K-12BacteriaRF00177Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.32022-02-23
1736WDG|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.32020-07-01
1746WD1|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.32020-07-01
1756WDF|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.32020-07-01
1766OFX|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF00177Non-rotated ribosome (Structure I)Electron microscopy3.32019-09-25
1776VWL|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.12020-06-03
1786OG7|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.32019-09-25
1797CPJ|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177ycbZ-stalled 70S ribosomeElectron microscopy3.32021-12-08
1807QGN|1|0Small subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeElectron microscopy3.372022-04-27
1817K50|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.42021-07-28
1825O2R|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.42017-07-26
1837D6Z|1|fSmall subunit ribosomal RNA16S ribosomal rRNAEscherichia coliBacteriaRF00177Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.42021-04-07
1847K52|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.42021-07-28
1856OGI|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.42019-09-25
1865WFK|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.42018-05-02
1875LZD|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.42016-11-23
1885WE6|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017770S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.42018-04-25
1897ACR|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF00177Structure of post-translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.442021-08-18
1907NSP|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.52021-08-11
1917JT2|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coli K-12BacteriaRF0017770S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.52020-11-11
1927K51|1|3Small subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coli K-12BacteriaRF00177Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.52021-07-28
1936WNV|1|3Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome without free 5S rRNA and with a perturbed PTCElectron microscopy3.52020-06-24
1946BU8|1|ASmall subunit ribosomal RNA16S ribosomal RNA, mRNAEscherichia coliBacteriaRF0017770S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.52018-01-31
1955LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xSmall subunit ribosomal RNA + Selenocysteine transfer RNA + Transfer RNA16S ribosomal RNA, fMetSec-tRNASec, SECIS mRNA, tRNAfMetEscherichia coliBacteriaRF00177 + RF01852 + RF00005Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.52016-11-23
1965MDY|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.352016-12-21
1976X7F|1|DSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.52020-09-02
1985U4I|1|aSmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.52017-01-11
1996ZTM|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.32020-09-16
2007OJ0|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2Electron microscopy3.52021-09-15
2016ZTJ|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.42020-09-16
2025IQR|1|2Small subunit ribosomal RNASSU rRNAEscherichia coliBacteriaRF00177Structure of RelA bound to the 70S ribosomeElectron microscopy32016-05-04
2033JBV|1|ASmall subunit ribosomal RNARNA (1530-MER)Escherichia coliBacteriaRF00177Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.322016-01-27
2046OSQ|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.52019-06-26
2056VWM|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.42020-06-03
2066VWN|1|1Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF0017770S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.42020-06-03
2076ORL|1|2Small subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.52019-06-19
2087BOG|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state E (body domain)Electron microscopy2.752021-07-07
2097OE1|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli str. K-12 substr. MG1655BacteriaRF0017730S ribosomal subunit from E. coliElectron microscopy3.052021-07-14
2106W7N|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF0017730S-Inactive-low-Mg2+ Class AElectron microscopy3.42020-10-21
2116ZTL|1|AASmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.52020-09-16
2127BOD|1|ASmall subunit ribosomal RNA16S rRNA (body domain of 30S subunit)Escherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state M (body domain)Electron microscopy2.882021-07-07
2137BOF|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state I (body domain)Electron microscopy2.922021-07-07
2147BOI|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)Electron microscopy2.982021-07-07
2157PJS|1|aSmall subunit ribosomal RNA16S ribosomal RNAEscherichia coliBacteriaRF00177Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.352021-10-20
2167O5H|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coliBacteriaRF00177Ribosomal methyltransferase KsgA bound to small ribosomal subunitElectron microscopy3.12021-06-16
2177OI0|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli BW25113BacteriaRF00177E.coli delta rbfA pre-30S ribosomal subunit class DElectron microscopy2.762021-07-14
2187NAS|1|ASmall subunit ribosomal RNA16S rRNAEscherichia coli K-12BacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome)Electron microscopy3.312021-07-07
2197AF8|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosomeEscherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state E (head domain)Electron microscopy2.752021-07-07
2207AF3|1|1Small subunit ribosomal RNA16S rRNA (head)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state M (head domain)Electron microscopy2.822021-07-07
2217AF5|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state I (head domain)Electron microscopy2.962021-07-07
2227AFA|1|1Small subunit ribosomal RNA16SrRNA (head domain of the 30S ribosome)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state F (head domain)Electron microscopy2.952021-07-07
2237AFD|1|1Small subunit ribosomal RNA16SrRNA of the head domain (residue C931 to G1386)Escherichia coliBacteriaRF00177Bacterial 30S ribosomal subunit assembly complex state A (head domain)Electron microscopy3.442021-07-07

Release history

Release3.2683.2693.2703.271
Date2023-02-012023-02-082023-02-152023-02-22

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_56726.94NR_3.5_56726.933.268(222) 3JBV|1|A, 3JCE|1|a, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V54|1|AA, 4V54|1|CA, 4V57|1|AA, 4V57|1|CA, 4V64|1|AA, 4V64|1|CA, 4V6C|1|AA, 4V6C|1|CA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V85|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5MGP|1|a, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U9F|1|A, 5U9G|1|A, 5UYM|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WFK|1|a, 5WFS|1|a, 6BU8|1|A, 6C4I|1|a, 6ENF|1|a, 6ENU|1|a, 6H4N|1|a, 6I7V|1|AA, 6I7V|1|BA, 6LKQ|1|s, 6OFX|1|3, 6OG7|1|3, 6OGI|1|3, 6OM6|1|2, 6ORE|1|2, 6ORL|1|2, 6OSQ|1|2, 6SZS|1|a, 6TBV|1|16S1, 6TC3|1|16S1, 6VWL|1|1, 6VWM|1|1, 6VWN|1|1, 6W7N|1|A, 6WD0|1|3, 6WD1|1|3, 6WDD|1|3, 6WDE|1|3, 6WDF|1|3, 6WDG|1|3, 6WNV|1|3, 6WNW|1|3, 6X6T|1|D, 6X7F|1|D, 6X7K|1|D, 6XZA|1|A1, 6XZB|1|A1, 6Y69|1|a, 6YSR|1|a, 6YSS|1|a, 6YST|1|a, 6ZTJ|1|AA, 6ZTL|1|AA, 6ZTM|1|AA, 6ZTO|1|AA, 6ZTP|1|AA, 6ZU1|1|AA, 7ABZ|1|2, 7AC7|1|2, 7ACJ|1|2, 7ACR|1|2, 7AF3|1|1, 7AF5|1|1, 7AF8|1|1, 7AFA|1|1, 7AFD|1|1, 7B5K|1|a, 7BOD|1|A, 7BOE|1|A, 7BOF|1|A, 7BOG|1|A, 7BOH|1|A, 7BOI|1|A, 7CPJ|1|a, 7D6Z|1|f, 7JT1|1|3, 7JT2|1|3, 7K00|1|A, 7K50|1|3, 7K51|1|3, 7K52|1|3, 7K53|1|3, 7K54|1|3, 7K55|1|3, 7LV0|1|3, 7M5D|1|2, 7N1P|1|16, 7N2C|1|16, 7N2U|1|16, 7N2V|1|16, 7N30|1|16, 7N31|1|16, 7NAR|1|A, 7NAS|1|A, 7NAX|1|A, 7NBU|1|A, 7NSO|1|a, 7NSP|1|a, 7NSQ|1|a, 7NWT|1|2, 7NWW|1|2, 7O19|1|AA, 7O1A|1|AA, 7O1C|1|AA, 7O5H|1|A, 7OE0|1|A, 7OE1|1|A, 7OI0|1|A, 7OIF|1|2, 7OIG|1|2, 7OII|1|2, 7OIZ|1|A, 7OJ0|1|A, 7OT5|1|2, 7OTC|1|a, 7P3K|1|A, 7PJS|1|a, 7PJV|1|a, 7PJY|1|a, 7Q4K|1|AA, 7QGN|1|0, 7S1G|1|C, 7S1H|1|C, 7S1I|1|C, 7S1J|1|C, 7S1K|1|C, 7SA4|1|2, 7SSD|1|3, 7SSN|1|3, 7SSO|1|3, 7ST2|1|3, 7ST6|1|3, 7ST7|1|3, 7TOS|1|16S, 7UG7|1|16, 8B0X|1|A, 8B7Y|1|C, 8EKC|1|a(1) 8EIU|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_56726.94NR_3.5_56726.953.272(223) 3JBV|1|A, 3JCE|1|a, 4U1U|1|AA, 4U1U|1|CA, 4U1V|1|AA, 4U1V|1|CA, 4U20|1|AA, 4U20|1|CA, 4U24|1|AA, 4U24|1|CA, 4U25|1|AA, 4U25|1|CA, 4U26|1|AA, 4U26|1|CA, 4U27|1|AA, 4U27|1|CA, 4V4H|1|AA, 4V4H|1|CA, 4V4Q|1|AA, 4V4Q|1|CA, 4V50|1|AA, 4V50|1|CA, 4V52|1|AA, 4V52|1|CA, 4V54|1|AA, 4V54|1|CA, 4V57|1|AA, 4V57|1|CA, 4V64|1|AA, 4V64|1|CA, 4V6C|1|AA, 4V6C|1|CA, 4V7S|1|AA, 4V7S|1|CA, 4V7T|1|AA, 4V7T|1|CA, 4V7U|1|AA, 4V7U|1|CA, 4V7V|1|AA, 4V7V|1|CA, 4V85|1|AA, 4V9C|1|AA, 4V9C|1|CA, 4V9D|1|AA, 4V9D|1|BA, 4V9O|1|BA, 4V9O|1|DA, 4V9O|1|FA, 4V9O|1|HA, 4V9P|1|BA, 4V9P|1|DA, 4V9P|1|FA, 4V9P|1|HA, 4WF1|1|AA, 4WF1|1|CA, 4WOI|1|AA, 4WOI|1|DA, 4WWW|1|QA, 4WWW|1|XA, 4YBB|1|AA, 4YBB|1|BA, 5AFI|1|a, 5H5U|1|h, 5IQR|1|2, 5IT8|1|AA, 5IT8|1|BA, 5J5B|1|AA, 5J5B|1|BA, 5J7L|1|AA, 5J7L|1|BA, 5J88|1|AA, 5J88|1|BA, 5J8A|1|AA, 5J8A|1|BA, 5J91|1|AA, 5J91|1|BA, 5JC9|1|AA, 5JC9|1|BA, 5LZD|1|a, 5LZE|1|a+5LZE|1|y+5LZE|1|v+5LZE|1|x, 5MDV|1|2, 5MDW|1|2, 5MDY|1|2, 5MDZ|1|2, 5MGP|1|a, 5NWY|1|0, 5O2R|1|a, 5U4I|1|a, 5U9F|1|A, 5U9G|1|A, 5UYM|1|A, 5WDT|1|a, 5WE4|1|a, 5WE6|1|a, 5WFK|1|a, 5WFS|1|a, 6BU8|1|A, 6C4I|1|a, 6ENF|1|a, 6ENU|1|a, 6H4N|1|a, 6I7V|1|AA, 6I7V|1|BA, 6LKQ|1|s, 6OFX|1|3, 6OG7|1|3, 6OGI|1|3, 6OM6|1|2, 6ORE|1|2, 6ORL|1|2, 6OSQ|1|2, 6SZS|1|a, 6TBV|1|16S1, 6TC3|1|16S1, 6VWL|1|1, 6VWM|1|1, 6VWN|1|1, 6W7N|1|A, 6WD0|1|3, 6WD1|1|3, 6WDD|1|3, 6WDE|1|3, 6WDF|1|3, 6WDG|1|3, 6WNV|1|3, 6WNW|1|3, 6X6T|1|D, 6X7F|1|D, 6X7K|1|D, 6XZA|1|A1, 6XZB|1|A1, 6Y69|1|a, 6YSR|1|a, 6YSS|1|a, 6YST|1|a, 6ZTJ|1|AA, 6ZTL|1|AA, 6ZTM|1|AA, 6ZTO|1|AA, 6ZTP|1|AA, 6ZU1|1|AA, 7ABZ|1|2, 7AC7|1|2, 7ACJ|1|2, 7ACR|1|2, 7AF3|1|1, 7AF5|1|1, 7AF8|1|1, 7AFA|1|1, 7AFD|1|1, 7B5K|1|a, 7BOD|1|A, 7BOE|1|A, 7BOF|1|A, 7BOG|1|A, 7BOH|1|A, 7BOI|1|A, 7CPJ|1|a, 7D6Z|1|f, 7JT1|1|3, 7JT2|1|3, 7K00|1|A, 7K50|1|3, 7K51|1|3, 7K52|1|3, 7K53|1|3, 7K54|1|3, 7K55|1|3, 7LV0|1|3, 7M5D|1|2, 7N1P|1|16, 7N2C|1|16, 7N2U|1|16, 7N2V|1|16, 7N30|1|16, 7N31|1|16, 7NAR|1|A, 7NAS|1|A, 7NAX|1|A, 7NBU|1|A, 7NSO|1|a, 7NSP|1|a, 7NSQ|1|a, 7NWT|1|2, 7NWW|1|2, 7O19|1|AA, 7O1A|1|AA, 7O1C|1|AA, 7O5H|1|A, 7OE0|1|A, 7OE1|1|A, 7OI0|1|A, 7OIF|1|2, 7OIG|1|2, 7OII|1|2, 7OIZ|1|A, 7OJ0|1|A, 7OT5|1|2, 7OTC|1|a, 7P3K|1|A, 7PJS|1|a, 7PJV|1|a, 7PJY|1|a, 7Q4K|1|AA, 7QGN|1|0, 7S1G|1|C, 7S1H|1|C, 7S1I|1|C, 7S1J|1|C, 7S1K|1|C, 7SA4|1|2, 7SSD|1|3, 7SSN|1|3, 7SSO|1|3, 7ST2|1|3, 7ST6|1|3, 7ST7|1|3, 7TOS|1|16S, 7UG7|1|16, 8B0X|1|A, 8B7Y|1|C, 8EIU|1|A, 8EKC|1|a(0) (1) 8AYE|1|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
17NAS|1|ABacterial 30S ribosomal subunit assembly complex state A (multibody refinement for body domain of 30S ribosome)ELECTRON MICROSCOPY3.31969
27O5H|1|ARibosomal methyltransferase KsgA bound to small ribosomal subunitELECTRON MICROSCOPY3.1964
37BOF|1|ABacterial 30S ribosomal subunit assembly complex state I (body domain)ELECTRON MICROSCOPY2.921065
47NAX|1|AComplete Bacterial 30S ribosomal subunit assembly complex state I (Consensus Refinement)ELECTRON MICROSCOPY2.961518
57PJS|1|aStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.35660
67PJV|1|aStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.11529
75U4I|1|aStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.51523
85IQR|1|2Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY31522
96YSS|1|aStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.61529
106YSR|1|aStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.11528
118B7Y|1|CCryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.ELECTRON MICROSCOPY31519
125U9F|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.21539
135U9G|1|A3.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.21539
146WD0|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY31539
157TOS|1|16SE. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.91532
167ST2|1|3Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.91539
176H4N|1|aStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY31534
186Y69|1|aCryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.861539
197QGN|1|0Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeELECTRON MICROSCOPY3.371532
205NWY|1|02.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.91539
216OM6|1|2Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.11523
227SA4|1|2Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.551522
236C4I|1|aConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.241523
245MDV|1|2Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.971523
255MDZ|1|2Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.11523
265MDW|1|2Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.061523
275MDY|1|2Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.351523
286X6T|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.21524
296X7K|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.11524
306X7F|1|DCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.51524
316ORE|1|2Release complex 70SELECTRON MICROSCOPY2.91523
327OIG|1|2CspA-27 cotranslational folding intermediate 3ELECTRON MICROSCOPY3.21523
337NWW|1|2CspA-27 cotranslational folding intermediate 1ELECTRON MICROSCOPY3.051523
347OIF|1|2CspA-27 cotranslational folding intermediate 2ELECTRON MICROSCOPY31523
357OT5|1|2CspA-70 cotranslational folding intermediate 1ELECTRON MICROSCOPY2.91523
367OII|1|2CspA-70 cotranslational folding intermediate 2ELECTRON MICROSCOPY31523
377NWT|1|2Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.661523
387S1I|1|CWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.481540
397S1G|1|Cwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.481540
407S1H|1|CWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.351540
417S1K|1|CCfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.421540
427S1J|1|CWild-type Escherichia coli ribosome with antibiotic radezolidELECTRON MICROSCOPY2.471540
438B0X|1|ATranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.551489
447N31|1|16Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.691522
456SZS|1|aRelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.061540
467NSO|1|aStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.91540
475MGP|1|aStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.11539
487NBU|1|AStructure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.ELECTRON MICROSCOPY3.111528
497AC7|1|2Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.081529
505H5U|1|hMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.011534
517Q4K|1|AAErythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainELECTRON MICROSCOPY31523
526TBV|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.71523
536TC3|1|16S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.71523
547O1A|1|AACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.41523
557O19|1|AACryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.91523
567O1C|1|AACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.61523
577D6Z|1|fMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.41539
585WFK|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.41531
596ENU|1|aPolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.11539
606ENF|1|aCryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.21539
617CPJ|1|aycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.31527
625O2R|1|aCryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.41539
637OIZ|1|ACryo-EM structure of 70S ribosome stalled with TnaC peptideELECTRON MICROSCOPY2.91509
647P3K|1|ACryo-EM structure of 70S ribosome stalled with TnaC peptide (control)ELECTRON MICROSCOPY2.91509
657OJ0|1|ACryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2ELECTRON MICROSCOPY3.51508
667K53|1|3Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.21539
677K50|1|3Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.41539
687ST6|1|3Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY31539
697M5D|1|2Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)ELECTRON MICROSCOPY2.81523
706OSQ|1|2RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.51523
716ORL|1|2RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.51523
727ABZ|1|2Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.211529
734V9D|1|BAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31539
744V9C|1|AAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31539
754WOI|1|DA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31539
767K00|1|AStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.981508
778EIU|1|AE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.241508
786ZU1|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY31522
796ZTO|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY31522
806ZTP|1|AAE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY31522
816ZTJ|1|AAE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.41522
826ZTM|1|AAE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.31522
836ZTL|1|AAE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.51522
847N1P|1|16Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.331531
856WDD|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.21539
866WDE|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY31539
875UYM|1|A70S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.21539
886BU8|1|A70S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.51539
895LZE|1|a+ 5LZE|1|y+ 5LZE|1|v+ 5LZE|1|xStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.51528
905LZD|1|aStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.41528
915AFI|1|a2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.91528
927NSQ|1|aStructure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.11540
937NSP|1|aStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.51540
945WE6|1|a70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.41528
955WDT|1|a70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY31529
965WE4|1|a70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.11529
975WFS|1|a70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY31529
986XZB|1|A1E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.541523
996XZA|1|A1E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.661523
1003JCE|1|aStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.21533
1017B5K|1|aE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.91522
1027K52|1|3Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.41539
1037K55|1|3Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.31539
1046WNW|1|3Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.21539
1057JT2|1|370S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.51539
1067JT1|1|370S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.31539
1076OG7|1|370S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.31539
1086OFX|1|3Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.31539
1096VWN|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.41508
1106VWM|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.41508
1114WOI|1|AA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION31538
1124V9C|1|CAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.31538
1134V9D|1|AAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION31538
1144V9O|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1154V9O|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1167N30|1|16Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.661515
1177SSO|1|3Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.21539
1187ST7|1|3Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.21539
1196WDF|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.31539
1206WDG|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.31539
1216WD1|1|3Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.31539
1227N2U|1|16Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.531523
1237SSN|1|3Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.21539
1247LV0|1|3Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.21539
1256WNV|1|370S ribosome without free 5S rRNA and with a perturbed PTCELECTRON MICROSCOPY3.51539
1263JBV|1|AMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.321530
1278EKC|1|aEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.71517
1286VWL|1|170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.11521
1296OGI|1|370S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.41539
1307N2V|1|16Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.541524
1317ACJ|1|2Structure of translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.21523
1324V50|1|AACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
1334V50|1|CACrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.221530
1344V64|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
1354V57|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
1364V52|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
1374V54|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
1384V4H|1|AACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
1394V4Q|1|AACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
1404WWW|1|XACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11530
1414V7S|1|CACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251530
1424V7V|1|CACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291530
1434V7T|1|CACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191530
1444V6C|1|CACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191530
1454V7U|1|CACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11530
1466I7V|1|BARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91533
1474WF1|1|CACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091539
1484U1U|1|CACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951539
1494U20|1|CACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91539
1504U1V|1|CACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31539
1514U27|1|CACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81539
1524U25|1|CACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91539
1534U26|1|CACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81539
1544U24|1|CACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91539
1554YBB|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11522
1565JC9|1|BAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031522
1575J7L|1|BAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31522
1585J8A|1|BAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11522
1595J91|1|BAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961522
1605J5B|1|BAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81522
1615IT8|1|BAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121522
1625J88|1|BAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321522
1635J88|1|AAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.321523
1645J91|1|AAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.961523
1655J5B|1|AAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.81523
1665J8A|1|AAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.11523
1675J7L|1|AAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION31523
1685IT8|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.121523
1695JC9|1|AAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.031523
1704U1U|1|AACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.951538
1714U20|1|AACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.91538
1724U1V|1|AACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION31538
1734WF1|1|AACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.091538
1744U27|1|AACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.81538
1754U25|1|AACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.91538
1764U26|1|AACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.81538
1774U24|1|AACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.91538
1784YBB|1|AAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.11523
1796I7V|1|AARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.91522
1804WWW|1|QACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.11533
1814V7S|1|AACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.251533
1824V7T|1|AACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.191533
1834V6C|1|AACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.191533
1844V7V|1|AACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.291533
1854V7U|1|AACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.11533
1864V9O|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1874V9P|1|DAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1884V9P|1|BAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1894V9O|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1904V9P|1|HAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1914V9P|1|FAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.91533
1926LKQ|1|sThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.11532
1934V85|1|AACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.21532
1944V57|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.51530
1954V52|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.211530
1964V64|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.51530
1974V54|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.31530
1984V4Q|1|CACrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.461530
1994V4H|1|CACrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.461530
2006YST|1|aStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.21529
2017PJY|1|aStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.11529
2027SSD|1|3Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.31539
2037K51|1|3Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.51539
2047K54|1|3Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.21539
2057UG7|1|1670S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.581504
2067OTC|1|aCryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BELECTRON MICROSCOPY2.91523
2077N2C|1|16Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.721524
2087BOD|1|ABacterial 30S ribosomal subunit assembly complex state M (body domain)ELECTRON MICROSCOPY2.881070
2097BOE|1|ABacterial 30S ribosomal subunit assembly complex state M (Consensus refinement)ELECTRON MICROSCOPY2.91523
2107NAR|1|AComplete Bacterial 30S ribosomal subunit assembly complex state F (+RsgA)(Consensus Refinement)ELECTRON MICROSCOPY31523
2117BOI|1|ABacterial 30S ribosomal subunit assembly complex state F (multibody refinement for body domain of 30S ribosome)ELECTRON MICROSCOPY2.981070
2127ACR|1|2Structure of post-translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.441523
2137OE1|1|A30S ribosomal subunit from E. coliELECTRON MICROSCOPY3.051530
2147OI0|1|AE.coli delta rbfA pre-30S ribosomal subunit class DELECTRON MICROSCOPY2.76963
2157OE0|1|AE. coli pre-30S delta rbfA ribosomal subunit class FELECTRON MICROSCOPY2.691510
2167BOH|1|AComplete Bacterial 30S ribosomal subunit assembly complex state E (+RbfA)(Consensus Refinement)ELECTRON MICROSCOPY2.821517
2177BOG|1|ABacterial 30S ribosomal subunit assembly complex state E (body domain)ELECTRON MICROSCOPY2.751064
2186W7N|1|A30S-Inactive-low-Mg2+ Class AELECTRON MICROSCOPY3.41372
2197AF8|1|1Bacterial 30S ribosomal subunit assembly complex state E (head domain)ELECTRON MICROSCOPY2.75453
2207AF3|1|1Bacterial 30S ribosomal subunit assembly complex state M (head domain)ELECTRON MICROSCOPY2.82453
2217AFA|1|1Bacterial 30S ribosomal subunit assembly complex state F (head domain)ELECTRON MICROSCOPY2.95453
2227AF5|1|1Bacterial 30S ribosomal subunit assembly complex state I (head domain)ELECTRON MICROSCOPY2.96453
2237AFD|1|1Bacterial 30S ribosomal subunit assembly complex state A (head domain)ELECTRON MICROSCOPY3.44453

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.0133 s