#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
18D71|1|B (rep)miR-122-21ntHomo sapiensHuman Ago2 bound to miR122(21nt)X-ray diffraction2.52023-05-03
28D6J|1|BRNA (5'-R(P*UP*GP*GP*AP*GP*UP*GP*UP*GP*AP*CP*AP*AP*UP*GP*GP*UP*GP*UP*UP*U)-3')synthetic constructHuman Ago2 bound to miR122(21nt) with PIWI loop swapped to AtAgo10 sequenceX-ray diffraction2.52023-05-03
35KI6|1|BmiR-122Homo sapiensHuman Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1X-ray diffraction2.152016-07-20

Release history

Release3.2813.2823.2833.2843.2853.2863.2873.2883.2893.2903.2913.2923.2933.2943.2953.2963.2973.2983.2993.3003.3013.3023.3033.3043.3053.3063.3073.3083.3093.3103.3113.3123.3133.3143.3153.3163.3173.3183.3193.3203.3213.3223.3233.3243.3253.3263.3273.3283.3293.3303.3313.332
Date2023-05-032023-05-102023-05-172023-05-242023-05-312023-06-072023-06-142023-06-212023-06-282023-07-052023-07-122023-07-192023-07-262023-08-022023-08-092023-08-162023-08-232023-08-302023-09-062023-09-132023-09-202023-09-272023-10-042023-10-112023-10-182023-10-252023-11-012023-11-082023-11-152023-11-242023-11-292023-12-062023-12-132023-12-202023-12-272024-01-032024-01-102024-01-172024-01-242024-01-312024-02-072024-02-142024-02-212024-02-282024-03-062024-03-132024-03-202024-03-272024-04-032024-04-102024-04-172024-04-24

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_70012.1NR_3.5_35200.13.281(1) 5KI6|1|B(2) 8D6J|1|B, 8D71|1|B(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
18D6J|1|BHuman Ago2 bound to miR122(21nt) with PIWI loop swapped to AtAgo10 sequenceX-RAY DIFFRACTION2.511
28D71|1|BHuman Ago2 bound to miR122(21nt)X-RAY DIFFRACTION2.511
35KI6|1|BHuman Argonaute-2 bound to a guide RNA with a nucleobase modification at position 1X-RAY DIFFRACTION2.159

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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