#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. ÅDate
16E1S|1|A (rep)RNA (33-MER)Caldanaerobacter subterraneusCrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amineX-ray diffraction1.82019-04-10
26E1T|1|ARNA (33-MER)Caldanaerobacter subterraneusCrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amineX-ray diffraction1.82019-04-10
36E1W|1|ARNA (33-MER)Caldanaerobacter subterraneusCrystal structure of a class I PreQ1 riboswitch complexed with PreQ1X-ray diffraction1.692019-04-10
46E1U|1|ARNA (33-MER)Caldanaerobacter subterraneusCrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 2: 2-[(dibenzo[b,d]furan-2-yl)oxy]-N,N-dimethylethan-1-amineX-ray diffraction1.942019-04-10
56E1V|1|ARNA (33-MER)Caldanaerobacter subterraneusCrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 3: 2-[(9H-carbazol-3-yl)oxy]-N,N-dimethylethan-1-amineX-ray diffraction2.562019-04-10
63Q50|1|APREQ1 RIBOSWITCHStructural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-bound stateX-ray diffraction2.752011-05-18
73Q51|1|APREQ1 RIBOSWITCHStructural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-free state.X-ray diffraction2.852011-05-18
83GCA|1|APreQ1 riboswitchThe structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domainX-ray diffraction2.752009-03-03

Release history

Release3.693.703.713.723.733.743.753.763.773.783.793.803.813.823.833.843.853.863.873.883.893.903.913.923.933.943.953.963.973.983.993.1003.1013.1023.1033.1043.1053.1063.1073.1083.1093.1103.1113.1123.1133.1143.1153.1163.1173.1183.1193.1203.1213.1223.1233.1243.1253.1263.1273.1283.1293.1303.131
Date2019-04-122019-04-192019-04-262019-05-032019-05-102019-05-172019-05-242019-05-312019-06-072019-06-142019-06-212019-06-282019-07-052019-07-122019-07-192019-07-262019-08-022019-08-092019-08-162019-08-232019-08-282019-09-042019-09-112019-09-192019-09-252019-10-032019-10-092019-10-162019-10-232019-10-302019-11-062019-11-132019-11-202019-11-272019-12-042019-12-112019-12-182019-12-252020-01-012020-01-082020-01-152020-01-222020-01-292020-02-052020-02-122020-02-192020-02-262020-03-042020-03-112020-03-182020-03-252020-04-012020-04-082020-04-152020-04-222020-04-292020-05-062020-05-132020-05-202020-05-272020-06-032020-06-102020-06-17

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent
NR_3.5_80276.1NR_3.5_89202.13.69(3) 3GCA|1|A, 3Q50|1|A, 3Q51|1|A(5) 6E1S|1|A, 6E1T|1|A, 6E1U|1|A, 6E1V|1|A, 6E1W|1|A(0)

Children

This class Descendant classesRelease idIntersectionOnly in this classAdded to child
NR_3.5_80276.1NR_3.5_80276.23.132(8) 3GCA|1|A, 3Q50|1|A, 3Q51|1|A, 6E1S|1|A, 6E1T|1|A, 6E1U|1|A, 6E1V|1|A, 6E1W|1|A(0) (2) 6VUH|1|A, 6VUI|1|A

Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolutionLength
13Q50|1|AStructural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-bound stateX-RAY DIFFRACTION2.7533
23GCA|1|AThe structural basis for recognition of the preQ0 metabolite by an unusually small riboswitch aptamer domainX-RAY DIFFRACTION2.7533
36E1V|1|ACrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 3: 2-[(9H-carbazol-3-yl)oxy]-N,N-dimethylethan-1-amineX-RAY DIFFRACTION2.5630
46E1U|1|ACrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 2: 2-[(dibenzo[b,d]furan-2-yl)oxy]-N,N-dimethylethan-1-amineX-RAY DIFFRACTION1.9431
56E1S|1|ACrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amineX-RAY DIFFRACTION1.831
66E1T|1|ACrystal structure of a class I PreQ1 riboswitch complexed with a synthetic compound 1: 2-[(dibenzo[b,d]furan-2-yl)oxy]ethan-1-amineX-RAY DIFFRACTION1.830
73Q51|1|AStructural analysis of a class I PreQ1 riboswitch aptamer in the metabolite-free state.X-RAY DIFFRACTION2.8532
86E1W|1|ACrystal structure of a class I PreQ1 riboswitch complexed with PreQ1X-RAY DIFFRACTION1.6931

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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