RNA 3D Hub //

Equivalence class NR_3.5_83717.169 Current

#IFEStandardized nameMoleculeOrganismSourceRfamTitleMethodRes. Å#NTsDate
18B0X|1|a (rep)Large subunit ribosomal RNA23S rRNAEscherichia coli BBacteriaRF02541Translating 70S ribosome in the unrotated state (P and E, tRNAs)Electron microscopy1.5527482022-11-30
29Q87|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BBacteriaRF02541Principles of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+Electron microscopy1.5529062025-05-14
39GHE|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Staphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)Electron microscopy1.8727822025-03-26
48CGV|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Tiamulin bound to the 50S subunitElectron microscopy1.6626872023-08-02
58CGK|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Lincomycin and Avilamycin bound to the 50S subunitElectron microscopy1.6426992023-07-19
68CGD|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Clindamycin bound to the 50S subunitElectron microscopy1.9827482023-07-26
79D89|1|DLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)Electron microscopy1.9527282025-01-22
88CEU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Retapamulin and Capreomycin bound to the 50S subunitElectron microscopy1.8327532023-07-26
98FTO|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with an improved MS2 tag inserted in H98Electron microscopy1.8527672023-08-02
108G6Y|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheElectron microscopy2.0927532023-04-05
118BIM|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteElectron microscopy2.0427582023-08-16
128BIL|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.Electron microscopy2.0427582023-08-16
137K00|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome at 2 Angstrom ResolutionElectron microscopy1.9827532020-09-23
148CAM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Evernimicin bound to the 50S subunitElectron microscopy1.8626902023-07-26
159GHB|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)Electron microscopy2.2127822025-03-26
169GHA|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Fusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)Electron microscopy2.2427822025-03-26
178G6W|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.0227532023-04-05
188EMM|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Composite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesElectron microscopy2.127532023-05-31
198BGE|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.1127582023-08-16
208G6X|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheElectron microscopy2.3127532023-03-22
218BHL|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.2127582023-08-16
229GHD|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Escherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)Electron microscopy2.4127822025-03-26
238HSP|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical stateElectron microscopy2.3227532024-04-03
249GHF|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Staphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)Electron microscopy2.427822025-03-26
259N2B|1|23Large subunit ribosomal RNA23S ribosomal RNA (rRNA) from the rrnB operonEscherichia coli K-12BacteriaRF02541Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)Electron microscopy2.227672025-03-19
268E30|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3142Electron microscopy1.9128982023-06-28
278BF7|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.3327582023-08-16
288YUO|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-siteElectron microscopy2.2527532024-11-06
298BHP|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.3727582023-08-16
308YUP|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNAElectron microscopy2.3927532024-11-06
318YUQ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNAElectron microscopy2.4127532024-11-06
328HTZ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical stateElectron microscopy2.427532024-04-03
339B4Z|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)Electron microscopy2.228972025-08-27
348IFB|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Dibekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.4327532024-02-14
358EIU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with A-loop mutations U2554C and U2555CElectron microscopy2.2427532023-02-01
368E49|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC31Electron microscopy2.0528982023-06-28
379N2C|1|23Large subunit ribosomal RNA23S ribosomal RNA (rRNA) from the rrnB operonEscherichia coli K-12BacteriaRF02541Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)Electron microscopy2.427682025-03-19
388YUS|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNAElectron microscopy2.4327532024-11-06
397Z20|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainElectron microscopy2.2929012022-08-10
407N1P|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationElectron microscopy2.3329042021-07-14
417LVK|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cfr-modified 50S subunit from Escherichia coliElectron microscopy2.228982021-12-15
428E3O|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to solithromycin and VM1Electron microscopy1.9928972023-06-28
437Y7G|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)Electron microscopy2.3427532023-10-25
448E46|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC21Electron microscopy2.3228972023-06-28
459B51|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)Electron microscopy2.428972025-08-27
467N2V|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)Electron microscopy2.5429042021-07-14
478W51|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of YchF(H114A) on E.coli 50S ribosomal subunitElectron microscopy2.429042024-08-28
488BH4|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.6227582023-08-16
498E42|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to tiamulin and azithromycinElectron microscopy2.2928982023-06-28
508YUR|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNAElectron microscopy2.4727532024-11-06
519CG5|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S initiation complex (tRNA-fMet M1 + UUG start codon)Electron microscopy2.5927532024-09-18
529H0L|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome with cognate tRNASer3 bound to A-site AGC codonElectron microscopy2.4927532025-05-28
538E41|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to tiamulin and VS1Electron microscopy2.1328982023-06-28
547N2U|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationElectron microscopy2.5329022021-07-14
559CG6|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S initiation complex (tRNA-fMet M1 + GUG start codon)Electron microscopy2.6127532024-09-18
568E47|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC26Electron microscopy2.3228982023-06-28
577S1H|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli ribosome with antibiotic linezolidElectron microscopy2.3528982021-11-17
588E45|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC17Electron microscopy2.328972023-06-28
597UG7|1|23Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BElectron microscopy2.5829032022-05-18
608E43|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3336Electron microscopy2.0928972023-06-28
617S1I|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.4828982022-03-02
629GXX|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codonElectron microscopy2.6127532025-05-28
637Y7E|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)Electron microscopy2.4127532023-10-25
646YS3|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideElectron microscopy2.5828882020-09-30
659WNQ|1|bLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of E.coli ribosome in complex with an engineered arrest peptideElectron microscopy2.5929022025-10-22
668EKC|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAElectron microscopy2.728452022-12-07
679AX7|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S initiation complex (tRNA-fMet M1 + CUG start codon)Electron microscopy2.6327532024-09-18
687S1G|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541wild-type Escherichia coli stalled ribosome with antibiotic linezolidElectron microscopy2.4828982021-11-17
698RQ0|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation IIElectron microscopy2.4429002024-05-22
708RPZ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation IElectron microscopy2.4429002024-05-22
718RQ2|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation IIIElectron microscopy2.4429002024-05-22
728E48|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC30Electron microscopy2.2728982023-06-28
738E3M|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to L-linker solithromycin conjugateElectron microscopy2.2528982023-06-28
749GHC|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Pre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)Electron microscopy2.7927822025-03-26
759AX8|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)Electron microscopy2.628542024-09-18
767Y7F|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)Electron microscopy2.4327532023-10-25
778HU1|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical stateElectron microscopy2.6927532024-04-03
788J1Z|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541The global structure of pre50S related to DbpA in state3Electron microscopy2.625132024-04-24
797N2C|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)Electron microscopy2.7229032021-07-14
808E33|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin analog SAB001Electron microscopy2.2328972023-06-28
818ZFG|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Structure of the Bacterial Ribosome with hypoxia-induced rRNA modificationsElectron microscopy2.6827612025-11-12
828G7R|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)Electron microscopy2.828992024-03-06
835J7L|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction328972016-07-27
847YLA|1|ILarge subunit ribosomal RNAEscherichia coli strain K-12 substr. MG1655_TMP32XR1 chromosome, complete genomeEscherichia coliBacteriaRF02541Cryo-EM structure of 50S-HflX complexElectron microscopy2.5228762023-01-04
859R3A|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of Stalled Beta-Galactosidase 70S Ribosome Nascent ChainElectron microscopy2.8627532026-01-28
867Y7C|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)Electron microscopy2.5127532023-10-25
879HYM|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNAElectron microscopy2.229012026-01-21
888ZEJ|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of E.coli ribosome in complex with an engineered arrest peptideElectron microscopy2.6929022025-06-18
899B50|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)Electron microscopy2.728972025-08-27
908ZTV|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome arrested by PepNL with RF2Electron microscopy2.927532025-03-19
918ZTU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome arrested by PepNLElectron microscopy2.927532025-03-19
928G7P|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)Electron microscopy2.928992024-03-06
937S1K|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cfr-modified Escherichia coli stalled ribosome with antibiotic radezolidElectron microscopy2.4228982022-01-19
947P3K|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of 70S ribosome stalled with TnaC peptide (control)Electron microscopy2.927532021-10-27
958E44|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to antibiotic analog SLC09Electron microscopy2.5328982023-06-28
969CG7|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S initiation complex (tRNA-fMet M1 + AUG start codon)Electron microscopy2.7527532024-09-18
978E32|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1Electron microscopy2.3528982023-06-28
987Y7H|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)Electron microscopy2.5127532023-10-25
997ZTA|1|23S1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptideElectron microscopy2.729032023-04-12
1008BHJ|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.8127582023-08-16
1016QDW|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideElectron microscopy2.8328882020-01-15
1028BGH|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationElectron microscopy2.8827582023-08-16
1038SYL|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsElectron microscopy2.928452023-08-09
1045J8A|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.128972016-07-06
1058FZH|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)Electron microscopy2.928992024-07-17
1067N31|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a post-translocation (POST) conformationElectron microscopy2.6929042021-07-14
1079SS6|1|D2Large subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome from RimM-KOElectron microscopy2.629032026-02-04
1088E35|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound SAB002Electron microscopy2.2728982023-06-28
1098IFC|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Arbekacin-bound E.coli 70S ribosome in the PURE systemElectron microscopy2.927532024-02-14
1108E36|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound streptogramin A analog 3146Electron microscopy2.3828972023-06-28
1115JC9|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0328972016-07-06
1129WNR|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factorElectron microscopy2.7629032025-10-22
1138BHN|1|0Large subunit ribosomal RNA23S rRNA RRLG-RRNAEscherichia coli K-12BacteriaRF02541Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteElectron microscopy2.8527582023-08-16
1146PJ6|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High resolution cryo-EM structure of E.coli 50SElectron microscopy2.228982020-01-22
1157OIZ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of 70S ribosome stalled with TnaC peptideElectron microscopy2.927532021-09-15
1168FZJ|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)Electron microscopy328992024-07-17
1177ZOD|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobiaElectron microscopy2.5629012022-08-10
1185MDV|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)Electron microscopy2.9729032016-12-14
1195H5U|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mechanistic insights into the alternative translation termination by ArfA and RF2Electron microscopy3.0128972017-01-25
1206PCR|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40oElectron microscopy2.528972020-06-17
1217ZP8|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with a stalled filamin domain 5 nascent chainElectron microscopy2.229012022-08-10
1229SS5|1|D2Large subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit in rimM-KO with RsfS (+H68)Electron microscopy2.729032026-02-04
1238FZE|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)Electron microscopy328992024-07-17
1247ST2|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)Electron microscopy2.929032022-02-23
1258RPY|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli 50S subunit in complex with the antimicrobial peptide Api137Electron microscopy2.6429002024-05-22
1269SS4|1|D2Large subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541pre-50S ribosomal subunit in rimM-KO with RsfS (-H68)Electron microscopy2.728082026-02-04
1278G7Q|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)Electron microscopy3.128992024-03-06
1284YBB|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.128972015-03-18
1298E3L|1|ILarge subunit ribosomal RNA50S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to D-linker solithromycin conjugateElectron microscopy2.3528972023-06-28
1307Y7D|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)Electron microscopy2.5827532023-10-25
1318FZI|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)Electron microscopy3.128992024-07-17
1329NL5|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformationElectron microscopy329032025-04-02
1338FZD|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)Electron microscopy3.128992024-07-17
1348G7S|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)Electron microscopy3.128992024-03-06
1355NWY|1|NLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF025412.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexElectron microscopy2.928972017-07-19
1367OTC|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BL21(DE3)BacteriaRF02541Cryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BElectron microscopy2.929032022-05-11
1377N30|1|23Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationElectron microscopy2.6629012021-07-14
1389IOT|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutantElectron microscopy2.728412025-07-30
1398ZFI|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Structure of E.coli ribosome in complex with an engineered arrest peptide and trigger factorElectron microscopy2.929032025-06-18
1407Q4K|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Erythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainElectron microscopy328972022-11-16
1415IT8|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1228972016-07-27
1427ZQ5|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with truncated uL23 and uL24 loopsElectron microscopy2.729002022-08-10
1436PC5|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compounds 46 and VS1Electron microscopy2.728972020-06-17
1446WD0|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)Electron microscopy329032020-07-01
1459NLH|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E.coli Initiation complex with YheS-EQ2Electron microscopy3.129032025-04-02
1466PCT|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 41qElectron microscopy2.828972020-06-17
1476ORE|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Release complex 70SElectron microscopy2.929032019-06-19
1487NSO|1|ALarge subunit ribosomal RNA23S rRNA (2903-MER)Escherichia coliBacteriaRF02541Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAElectron microscopy2.929032021-07-14
1498FZG|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)Electron microscopy3.128992024-07-17
1505J91|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9628972016-07-06
1515WE4|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu wt complex with GppNHpElectron microscopy3.129002018-04-25
1525WFS|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)Electron microscopy329002018-05-02
1537BL4|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541in vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleElectron microscopy2.428972021-05-12
1546S0K|1|ALarge subunit ribosomal RNA23S ribosomal RNA, tRNA-CCAEscherichia coliBacteriaRF02541Ribosome nascent chain in complex with SecAElectron microscopy3.128832019-10-09
1556PC7|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 46Electron microscopy2.528972020-06-17
1565MDZ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome (empty A site)Electron microscopy3.129032016-12-14
1576WDE|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)Electron microscopy329032020-07-01
1587ST6|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Pre translocation, non-rotated 70S ribosome (Structure I)Electron microscopy329032022-02-23
1599HUQ|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome with complexed filament nascent chain at length 47, with P-site tRNAElectron microscopy2.4929012026-01-14
1607D6Z|1|ALarge subunit ribosomal RNA23S ribosomal rRNAEscherichia coliBacteriaRF02541Molecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorElectron microscopy3.429032021-04-07
1618FZF|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)Electron microscopy3.228992024-06-26
1625J88|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3228972016-07-06
1637B5K|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.Electron microscopy2.928972021-05-26
1647ZQ6|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chainElectron microscopy2.7529012022-08-10
1657M5D|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)Electron microscopy2.829032022-10-19
1666PCS|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40eElectron microscopy2.828972020-06-17
1675J7L|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-ray diffraction328982016-07-27
1686PC6|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 47Electron microscopy2.528972020-06-17
1698URM|1|1Large subunit ribosomal RNA13S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A siteElectron microscopy329032025-07-09
1704WOI|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction328972015-08-05
1716LKQ|1|tLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541The Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-ray diffraction3.128502020-05-06
1727NBU|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.Electron microscopy3.1129002022-03-02
1735J8A|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-ray diffraction3.128982016-07-06
1749HUS|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAsElectron microscopy2.429012026-01-14
1754WOI|1|CALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025414,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-ray diffraction328972015-08-05
1766SZS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisElectron microscopy3.0629032019-12-04
1777SSO|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)Electron microscopy3.229032022-02-23
1789RTU|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)Electron microscopy329032025-10-01
1799NL6|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformationElectron microscopy3.229032025-04-02
1807OJ0|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2Electron microscopy3.528072021-09-15
1816PCQ|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to VM2Electron microscopy2.628972020-06-17
1825WDT|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GppNHpElectron microscopy329002018-04-25
1836WNW|1|4Large subunit ribosomal RNA23s-5s joint ribosomal RNAEscherichia coliBacteriaRF02541Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAElectron microscopy3.230312020-06-24
1848VWQ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)Electron microscopy3.128692025-08-13
1854V9P|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
1868KIE|1|aLarge subunit ribosomal RNA23S rRNA (partial)Escherichia coliBacteriaRF02541Structure of YchF with 50S ribosomal subunit (local map)Electron microscopy2.53612024-08-28
1877SSN|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)Electron microscopy3.229032022-02-23
1885JC9|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-ray diffraction3.0328982016-07-06
1899MKK|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of arbekacin bound Escherichia coli 70S ribosomeElectron microscopy3.227322025-07-30
1906WNT|1|4Large subunit ribosomal RNA23s-5s joint ribosomal RNAEscherichia coliBacteriaRF0254150S ribosomal subunit without free 5S rRNA and perturbed PTCElectron microscopy3.130252020-06-24
1915UYM|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)Electron microscopy3.229032017-06-07
1929MQ4|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Damaged 70S ribosome with PrfH boundElectron microscopy2.7829032025-02-05
1934V9P|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
1946Y69|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXElectron microscopy2.8628872020-07-01
1957K53|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)Electron microscopy3.229032021-07-28
1966WDD|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)Electron microscopy3.229032020-07-01
1976OM6|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAElectron microscopy3.129032021-02-10
1986I7V|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.928972018-12-05
1999NLF|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformationElectron microscopy3.229032025-04-02
2004V9P|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
2016XZB|1|A2Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).Electron microscopy2.5428972020-11-04
2029I3L|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNAElectron microscopy3.128902026-02-04
2034V9P|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
2047K54|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)Electron microscopy3.229032021-07-28
2059GFT|1|NLarge subunit ribosomal RNA23S RNAEscherichia coliBacteriaRF02541Structure of the HrpA-bound E. coli disome, Class IElectron microscopy3.128972025-02-12
2067NSQ|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.129032021-07-14
2078W2N|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)Electron microscopy3.228152025-08-13
2085GAE|1|ALarge subunit ribosomal RNA23S rRNA, tRNA CCA end (5'-R(P*CP*CP*A)-3')Escherichia coliBacteriaRF02541RNC in complex with a translocating SecYEGElectron microscopy3.3328842016-01-27
2098UXB|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codonElectron microscopy2.929002025-07-09
2109NL7|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformationElectron microscopy3.329032025-04-02
2115WE6|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and cognate tRNAElectron microscopy3.429002018-04-25
2126XZA|1|A2Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).Electron microscopy2.6628972020-11-04
2135MGP|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsElectron microscopy3.129002016-12-14
2144V9O|1|EALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
2157JT1|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF0254170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)Electron microscopy3.329032020-11-11
2164V9O|1|AALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
2177ST7|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)Electron microscopy3.229032022-02-23
2187SSD|1|1Large subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Mid translocation intermediate with EF-G bound with GDP (Structure IV)Electron microscopy3.329032022-02-23
2199NLE|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformationElectron microscopy3.229032025-04-02
2206PC8|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 40qElectron microscopy2.928972020-06-17
2217K55|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)Electron microscopy3.329032021-07-28
2226WD1|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)Electron microscopy3.329032020-07-01
2239NLQ|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformationElectron microscopy3.329032025-04-02
2244V9O|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
2257LV0|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)Electron microscopy3.229032021-07-28
2266PCH|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compound 21Electron microscopy2.928972020-06-17
2276ENU|1|ALarge subunit ribosomal RNA23S Ribosomal RNAEscherichia coliBacteriaRF02541Polyproline-stalled ribosome in the presence of elongation-factor P (EF-P)Electron microscopy3.128712017-11-22
2285U9G|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)Electron microscopy3.229032017-03-22
2299NLJ|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E.coli Initiation complex with Uup-EQ2Electron microscopy3.129032025-04-02
2304WWW|1|RALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.128542014-12-24
2315U9F|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025413.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)Electron microscopy3.229032017-03-22
2324WF1|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0928972014-11-05
2336VWL|1|2Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)Electron microscopy3.128332020-06-03
2348Q4F|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of arbekacin bound Escherichia coli 70S ribosomeElectron microscopy3.127322024-08-14
2354V6C|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1928542014-07-09
2366WDF|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)Electron microscopy3.329032020-07-01
2376WDG|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)Electron microscopy3.329032020-07-01
2386QUL|1|ALarge subunit ribosomal RNA23S rRNA, P-site fMet-tRNA(fMet)Escherichia coliBacteriaRF02541Structure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidElectron microscopy327952019-04-10
2399HY6|1|bLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAsElectron microscopy2.629012026-01-28
2409NLS|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformationElectron microscopy3.329032025-04-02
2414V9D|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction328972014-07-09
2426H4N|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeElectron microscopy329002018-09-05
2434V52|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2128412014-07-09
2447K50|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Pre-translocation non-frameshifting(CCA-A) complex (Structure I)Electron microscopy3.429032021-07-28
2457K52|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)Electron microscopy3.429032021-07-28
2469NLB|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformationElectron microscopy3.229032025-04-02
2477BV8|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Mature 50S ribosomal subunit from RrmJ knock out E.coli strainElectron microscopy3.1428972020-07-01
2484U27|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.828972014-07-30
2494V57|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.528412014-07-09
2504V7T|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1928542014-07-09
2514V52|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-ray diffraction3.2128412014-07-09
2525LZD|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)Electron microscopy3.429032016-11-23
2534V57|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-ray diffraction3.528412014-07-09
2547JT2|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF0254170S ribosome stalled on long mRNA with ArfB bound in the A siteElectron microscopy3.529032020-11-11
2557CPJ|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541ycbZ-stalled 70S ribosomeElectron microscopy3.329002021-12-08
2566WNV|1|4Large subunit ribosomal RNA23s-5s joint ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome without free 5S rRNA and with a perturbed PTCElectron microscopy3.530252020-06-24
2577K51|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)Electron microscopy3.529032021-07-28
2585WFK|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF0254170S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)Electron microscopy3.429002018-05-02
2594YBB|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction2.128982015-03-18
2605J88|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-ray diffraction3.3228982016-07-06
2618VV4|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codonElectron microscopy3.428212025-07-30
2625LZE|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)Electron microscopy3.529002016-11-23
2638CEP|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Round2 30S head (no antibiotic)Electron microscopy2.04312023-07-19
2649GGR|1|NLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the HrpA-bound E. coli disome, Class IIElectron microscopy3.228972025-02-12
2654U1U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9528972014-07-30
2664V54|1|DBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.328412014-07-09
2678UTJ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frameElectron microscopy3.529032025-07-09
2684U24|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.928972014-07-30
2694U25|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.928972014-07-30
2704V7S|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2528542014-07-09
2716BU8|1|01Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome with S1 domains 1 and 2 (Class 1)Electron microscopy3.529032018-01-31
2725IQR|1|1Large subunit ribosomal RNALSU rRNAEscherichia coliBacteriaRF02541Structure of RelA bound to the 70S ribosomeElectron microscopy329042016-05-04
2736OG7|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)Electron microscopy3.329032019-09-25
2749NJF|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli pre-elongation complex without an A-site tRNA with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformationElectron microscopy3.429032025-04-02
2754U26|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.828972014-07-30
2768CGU|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Gentamicin bound to the 30S bodyElectron microscopy1.89312023-07-26
2776ORL|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF1 pre-accommodated 70S complex at 24 msElectron microscopy3.529032019-06-19
2784V9O|1|GALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Control of ribosomal subunit rotation by elongation factor GX-ray diffraction2.928542014-07-09
2794V85|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-ray diffraction3.228532014-07-09
2804V50|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2228412014-07-09
2814V54|1|BBLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-ray diffraction3.328412014-07-09
2826OFX|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Non-rotated ribosome (Structure I)Electron microscopy3.329032019-09-25
2834V7U|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.128542014-07-09
2844V64|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.528412014-07-09
2854V7V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2928542014-07-09
2866WYV|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 50S ribosome bound to compounds 47 and VS1Electron microscopy2.7528972020-06-17
2876U48|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S with phazolicin (PHZ) bound in exit tunnelElectron microscopy2.8728982019-09-18
2888VUP|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codonElectron microscopy3.429032025-07-30
2899MOR|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Damaged 70S ribosome with PrfH boundElectron microscopy2.6529032025-02-05
2908UZ3|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codonElectron microscopy3.229032025-07-09
2914V50|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-ray diffraction3.2228412014-07-09
2929HA6|1|ALarge subunit ribosomal RNA23S ribosomal rRNAEscherichia coliBacteriaRF02541mature 50S subunit supplemented with Api137Electron microscopy3.0829002025-01-22
2934V64|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-ray diffraction3.528412014-07-09
2946VWN|1|2Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)Electron microscopy3.428332020-06-03
2958T5D|1|BLarge subunit ribosomal RNA23S RNAEscherichia coliBacteriaRF02541Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiationElectron microscopy3.229032024-08-28
2969H3Z|1|ALarge subunit ribosomal RNA23S ribosomal rRNAEscherichia coliBacteriaRF02541mature 50S subunitElectron microscopy2.9829002025-01-22
2976OGI|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)Electron microscopy3.429032019-09-25
2989NJV|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S initiation complex (bL33 absent)Electron microscopy3.129032025-04-02
2996VWM|1|2Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254170S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)Electron microscopy3.428332020-06-03
3006ENF|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PElectron microscopy3.228072017-11-22
3019HAI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Pooled 50S subunit C-CP_L2-L28 precursor states supplemented with Api137Electron microscopy3.0118692025-01-22
3029NKL|1|R1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S initiation complexElectron microscopy3.329032025-04-02
3039GFT|1|AVLarge subunit ribosomal RNA23S RNAEscherichia coliBacteriaRF02541Structure of the HrpA-bound E. coli disome, Class IElectron microscopy3.128972025-02-12
3045IT8|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541High-resolution structure of the Escherichia coli ribosomeX-ray diffraction3.1228982016-07-27
3054V9D|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-ray diffraction328962014-07-09
3063JBV|1|bLarge subunit ribosomal RNARNA (2903-MER)Escherichia coliBacteriaRF02541Mechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsElectron microscopy3.3229032016-01-27
3075O2R|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeElectron microscopy3.429002017-07-26
3085J91|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the Wild-type 70S E coli ribosome bound to TigecyclineX-ray diffraction2.9628982016-07-06
3096C4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Conformation of methylated GGQ in the peptidyl transferase center during translation terminationElectron microscopy3.2429042018-02-21
3108CGR|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Apramycin bound to the 30S bodyElectron microscopy2.12302023-07-26
3116C4H|1|ALarge subunit ribosomal RNA23S rRNA, P-site tRNA fMetEscherichia coliBacteriaRF02541Conformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)Electron microscopy3.16362018-02-21
3124V4Q|1|DBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4628412014-07-09
3138C8Y|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM captures early ribosome assembly in actionElectron microscopy3.0325482023-04-05
3146I7V|1|CALarge subunit ribosomal RNA23S ribsomal RNAEscherichia coliBacteriaRF02541Ribosomal protein paralogs bL31 and bL36X-ray diffraction2.928982018-12-05
3159H3Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S subunit precursor 50S_(L16)-Electron microscopy3.0928952025-01-22
3164U1V|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction328972014-07-30
3174U1U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to quinupristin.X-ray diffraction2.9528972014-07-30
3184V4Q|1|BBLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-ray diffraction3.4628412014-07-09
3197BL5|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli str. K-12 substr. MG1655BacteriaRF02541pre-50S-ObgE particleElectron microscopy3.329132021-05-12
3204U20|1|BALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.928972014-07-30
3216OSQ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541RF1 accommodated state bound Release complex 70S at long incubation time pointElectron microscopy3.529032019-06-26
3228UQL|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.228802024-05-29
3238CGJ|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Streptomycin bound to the 30S bodyElectron microscopy1.79312023-07-26
3246I0Y|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541TnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelElectron microscopy3.228542018-12-05
3257NSP|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAElectron microscopy3.529032021-08-11
3268T5H|1|BLarge subunit ribosomal RNA23SEscherichia coliBacteriaRF02541Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiationElectron microscopy3.329032024-08-28
3278G38|1|BLarge subunit ribosomal RNA23SEscherichia coliBacteriaRF02541Time-resolved cryo-EM study of the 70S recycling by the HflX:3rd IntermediateElectron microscopy3.229032023-12-06
3284U27|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin and linopristin.X-ray diffraction2.828972014-07-30
3294V9C|1|DALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.328972014-07-09
3308C8Z|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM captures early ribosome assembly in actionElectron microscopy3.1222052023-04-05
3319GGR|1|AVLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the HrpA-bound E. coli disome, Class IIElectron microscopy3.228972025-02-12
3324U25|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to virginiamycin M1.X-ray diffraction2.928972014-07-30
3339HA5|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Pooled 50S subunit C_L2 precursor states supplemented with Api137Electron microscopy3.320612025-01-22
3344WF1|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to negamycin.X-ray diffraction3.0928972014-11-05
3354U1V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to linopristin.X-ray diffraction328972014-07-30
3368URY|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeElectron microscopy3.128802024-06-12
3377BL3|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541pre-50S-ObgE particle state 2Electron microscopy3.529022021-05-12
3388C90|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM captures early ribosome assembly in actionElectron microscopy3.1521002023-04-05
3394V6C|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-ray diffraction3.1928412014-07-09
3407QGN|1|NLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the SmrB-bound E. coli disome - stalled 70S ribosomeElectron microscopy3.3728972022-04-27
3414U20|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to flopristin.X-ray diffraction2.928972014-07-30
3424U24|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin.X-ray diffraction2.928972014-07-30
3434U26|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-ray diffraction2.828972014-07-30
3444WWW|1|YALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to CEM-101X-ray diffraction3.128412014-12-24
3459H3U|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF0254150S subunit precursor C_H68Electron microscopy3.4725392025-01-22
3464V7T|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to chloramphenicol.X-ray diffraction3.1928412014-07-09
3478C99|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Time limited cryo-EM reveals early ribosome assembly in actionElectron microscopy3.299452023-04-05
3484V9C|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Allosteric control of the ribosome by small-molecule antibioticsX-ray diffraction3.328972014-07-09
3494V7S|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to telithromycin.X-ray diffraction3.2528412014-07-09
3508VOO|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, ops signal, RfaH, NusA, and fMet-tRNAs in E-site and P-siteElectron microscopy3.428802025-07-23
3514V7V|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to clindamycin.X-ray diffraction3.2928412014-07-09
3525U4I|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeElectron microscopy3.529042017-01-11
3534V7U|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Crystal structure of the E. coli ribosome bound to erythromycin.X-ray diffraction3.128412014-07-09
3546X7K|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.128802020-09-02
3558UR0|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Escherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeElectron microscopy3.428802024-05-29
3566X7F|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.528802020-09-02
3578G2U|1|BLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900msElectron microscopy329032023-12-06
3588G34|1|BLarge subunit ribosomal RNA23SEscherichia coliBacteriaRF02541Time-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediateElectron microscopy3.229032023-12-06
3598G31|1|BLarge subunit ribosomal RNA23SEscherichia coliBacteriaRF02541Time-resolved cryo-EM study of the 70S recycling by the HflX:2nd IntermediateElectron microscopy3.229032023-12-06
3606X6T|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteElectron microscopy3.228802020-09-02
3613JCE|1|ALarge subunit ribosomal RNA23 ribosomal RNAEscherichia coliBacteriaRF02541Structure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)Electron microscopy3.229032016-01-13
3625J5B|1|DALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.828972016-07-27
3634V4H|1|DBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4628412014-07-09
3644V4H|1|BBLarge subunit ribosomal RNA23S RIBOSOMAL RNAEscherichia coliBacteriaRF02541Crystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-ray diffraction3.4628412014-07-09
3655J5B|1|CALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Structure of the WT E coli ribosome bound to tetracyclineX-ray diffraction2.828982016-07-27
3665MDY|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.3529032016-12-21
3677TOS|1|23SLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20Electron microscopy2.929032022-05-25
3686HRM|1|1Small subunit ribosomal RNAstapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNA,stapled 16S-23S rRNAEscherichia coliBacteriaRF02541E. coli 70S d2d8 stapled ribosomeElectron microscopy2.9644502018-12-19
3698AYE|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 70S ribosome bound to thermorubin and fMet-tRNAElectron microscopy1.9627532023-03-01
3708QOA|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Structure of SecM-stalled Escherichia coli 70S ribosomeElectron microscopy227532024-03-20
3717QQ3|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.Electron microscopy2.128982023-01-18
3728ANA|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunitElectron microscopy2.127332023-03-08
3738QBT|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541E. coli ApdP-stalled ribosomal complexElectron microscopy2.228412024-03-20
3748R6C|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF0254170S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.Electron microscopy2.227532024-07-24
3756XZ7|1|ALarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).Electron microscopy2.128972020-07-22
3767PJS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)Electron microscopy2.3529032021-10-20
3778AKN|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeElectron microscopy2.327532023-03-08
3787O1A|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanElectron microscopy2.428972021-09-01
3797S1J|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Wild-type Escherichia coli ribosome with antibiotic radezolidElectron microscopy2.4728982022-03-02
3809FBV|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF0254170S Escherichia coli ribosome with P-site initiatior tRNA.Electron microscopy2.427532024-06-26
3818R8M|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF0254170S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.Electron microscopy2.427382024-07-24
3827SA4|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Damaged 70S ribosome with PrfH boundElectron microscopy2.5529032022-08-03
3836YSS|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateElectron microscopy2.629032020-08-19
3847NWT|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)Electron microscopy2.6629032021-12-15
3856TBV|1|23S1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)Electron microscopy2.728972020-01-01
3866TC3|1|23S1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)Electron microscopy2.728972020-01-01
3877O1C|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanElectron microscopy2.628972021-09-01
3888P16|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E167K RF2 on E. coli 70S release complex with UGG (Structure I)Electron microscopy2.7728992024-05-22
3898P18|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E167K RF2 on E. coli 70S release complex with UGG (Structure III)Electron microscopy2.7728992024-05-22
3908QK7|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E167K RF2 on E. coli 70S release complex with UAAElectron microscopy2.7728992024-09-25
3918P17|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541E167K RF2 on E. coli 70S release complex with UGG (Structure II)Electron microscopy2.7828992024-05-22
3928ZFF|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli BW25113BacteriaRF02541Structure of the Bacterial Ribosome without hypoxia-induced rRNA modificationsElectron microscopy2.5927612025-11-12
3938AM9|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BW25113BacteriaRF02541Cryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeElectron microscopy2.827532023-03-08
3947OT5|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-70 cotranslational folding intermediate 1Electron microscopy2.929032022-01-19
3957OII|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-70 cotranslational folding intermediate 2Electron microscopy329032022-01-19
3967OIF|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-27 cotranslational folding intermediate 2Electron microscopy329032022-01-19
3978B7Y|1|ILarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Cryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.Electron microscopy328982023-01-25
3987O19|1|BALarge subunit ribosomal RNARibosomal RNA 23SEscherichia coli K-12BacteriaRF02541Cryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanElectron microscopy2.928972021-09-01
3995AFI|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF025412.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMElectron microscopy2.929002015-03-11
4007NWW|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-27 cotranslational folding intermediate 1Electron microscopy3.0529032022-01-19
4017AC7|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of accomodated trans-translation complex on E. Coli stalled ribosome.Electron microscopy3.0829032021-08-18
4028PKL|1|7Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)Electron microscopy3.0929042024-03-06
4038AP4|1|aLarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541Structure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAElectron microscopy327502022-11-16
4046YSR|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 stalled ribosome complexElectron microscopy3.129032020-08-19
4057PJY|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)Electron microscopy3.129032021-10-20
4067PJV|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)Electron microscopy3.129032021-10-20
4076ZTP|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 6Electron microscopy329002020-09-16
4086ZU1|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 2Electron microscopy329002020-09-16
4096ZTO|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in uncoupled state 1Electron microscopy329002020-09-23
4105MDW|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)Electron microscopy3.0629032016-12-14
4117OIG|1|1Large subunit ribosomal RNA23S rRNAEscherichia coliBacteriaRF02541CspA-27 cotranslational folding intermediate 3Electron microscopy3.229032022-01-19
4126YST|1|ALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Structure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateElectron microscopy3.229032020-08-19
4137ACJ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.229032021-08-18
4147ABZ|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.2129042021-08-18
4159GR1|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli BL21(DE3)BacteriaRF02541E. coli 70S-TEC complex in delivery stateElectron microscopy3.1727482024-11-20
4168R3V|1|72Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli paused disome complex (non-rotated disome interface)Electron microscopy3.2829042024-03-06
4178PEG|1|7Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)Electron microscopy3.329032024-03-06
4188A3L|1|aLarge subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structural insights into the binding of bS1 to the ribosomeElectron microscopy3.4229032023-05-10
4197ACR|1|1Large subunit ribosomal RNA23S ribosomal RNAEscherichia coli K-12BacteriaRF02541Structure of post-translocated trans-translation complex on E. coli stalled ribosome.Electron microscopy3.4429032021-08-18
4208RCL|1|72Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli paused disome complex (Non-rotated disome interface class 1)Electron microscopy3.4929042024-03-13
4216ZTM|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in collided state without NusGElectron microscopy3.329012020-09-16
4227ODE|1|ILarge subunit ribosomal RNA23S rRNAEscherichia coli K-12BacteriaRF02541E. coli 50S ribosome LiCl core particleElectron microscopy2.8419902022-06-01
4236ZTJ|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)Electron microscopy3.429002020-09-16
4246ZTL|1|BALarge subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541E. coli 70S-RNAP expressome complex in collided state bound to NusGElectron microscopy3.528992020-09-16
4258R3V|1|71Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli paused disome complex (non-rotated disome interface)Electron microscopy3.28302024-03-06
4268RCL|1|71Large subunit ribosomal RNA23S ribosomal RNAEscherichia coliBacteriaRF02541Escherichia coli paused disome complex (Non-rotated disome interface class 1)Electron microscopy3.49302024-03-13

Release history

Release4.254.26
Date2026-02-042026-02-11

Parents

This classParent classesRelease idIntersectionAdded to this classOnly in parent

Children

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Instances are ordered to put similar structures near each other. Select one instance to see its 3D structure. Selecting two or more instances will show their superposition, but only chains with identical numbers of observed nucleotides will superpose well. Large structures are slow to display; this tool is not designed for that.

#SViewPDBTitleMethodResolution#NTs
16HRM|1|1E. coli 70S d2d8 stapled ribosomeELECTRON MICROSCOPY2.964450
28C99|1|ATime limited cryo-EM reveals early ribosome assembly in actionELECTRON MICROSCOPY3.29945
37ODE|1|IE. coli 50S ribosome LiCl core particleELECTRON MICROSCOPY2.841990
48C90|1|ACryo-EM captures early ribosome assembly in actionELECTRON MICROSCOPY3.152100
58C8Z|1|ACryo-EM captures early ribosome assembly in actionELECTRON MICROSCOPY3.122205
68C8Y|1|ACryo-EM captures early ribosome assembly in actionELECTRON MICROSCOPY3.032548
79HAI|1|APooled 50S subunit C-CP_L2-L28 precursor states supplemented with Api137ELECTRON MICROSCOPY3.011869
87BL3|1|Apre-50S-ObgE particle state 2ELECTRON MICROSCOPY3.52902
96WNV|1|470S ribosome without free 5S rRNA and with a perturbed PTCELECTRON MICROSCOPY3.53025
106WNT|1|450S ribosomal subunit without free 5S rRNA and perturbed PTCELECTRON MICROSCOPY3.13025
119H3Y|1|A50S subunit precursor 50S_(L16)-ELECTRON MICROSCOPY3.092895
129H3U|1|A50S subunit precursor C_H68ELECTRON MICROSCOPY3.472539
139HA5|1|APooled 50S subunit C_L2 precursor states supplemented with Api137ELECTRON MICROSCOPY3.32061
147BL4|1|Ain vitro reconstituted 50S-ObgE-GMPPNP-RsfS particleELECTRON MICROSCOPY2.42897
157BV8|1|AMature 50S ribosomal subunit from RrmJ knock out E.coli strainELECTRON MICROSCOPY3.142897
168E45|1|IE. coli 50S ribosome bound to antibiotic analog SLC17ELECTRON MICROSCOPY2.32897
178E46|1|IE. coli 50S ribosome bound to antibiotic analog SLC21ELECTRON MICROSCOPY2.322897
188E32|1|IE. coli 50S ribosome bound to compound streptogramin analogs SA1 and SB1ELECTRON MICROSCOPY2.352898
198E3L|1|IE. coli 50S ribosome bound to D-linker solithromycin conjugateELECTRON MICROSCOPY2.352897
208E48|1|IE. coli 50S ribosome bound to antibiotic analog SLC30ELECTRON MICROSCOPY2.272898
218E47|1|IE. coli 50S ribosome bound to antibiotic analog SLC26ELECTRON MICROSCOPY2.322898
228E35|1|IE. coli 50S ribosome bound to compound SAB002ELECTRON MICROSCOPY2.272898
238BHN|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and m6AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.852758
248BF7|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.332758
258BH4|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and AAm6A mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.622758
268BHJ|1|0Elongating E. coli 70S ribosome containing deacylated tRNA(iMet) in the P-site and Am6AA mRNA codon with cognate dipeptidyl-tRNA(Lys) in the A-siteELECTRON MICROSCOPY2.812758
278BGH|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.882758
288BHL|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and Am6AA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.212758
298BGE|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and AAm6A mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.112758
308BIL|1|0Initiation complex of the E. coli 70S ribosome with mRNA containing AAA codon in the A-site.ELECTRON MICROSCOPY2.042758
318BIM|1|0Initiation complex of the E. coli 70S ribosome with mRNA containing AAm6A codon in the A-siteELECTRON MICROSCOPY2.042758
328BHP|1|0Elongating E. coli 70S ribosome containing acylated tRNA(iMet) in the P-site and m6AAA mRNA codon in the A-site after uncompleted di-peptide formationELECTRON MICROSCOPY2.372758
338G7R|1|AStructure of the Escherichia coli 70S ribosome in complex with A-site tRNAIle(LAU) bound to the cognate AUA codon (Structure III)ELECTRON MICROSCOPY2.82899
348EKC|1|AEscherichia coli 70S ribosome bound to thermorubin, deacylated P-site tRNAfMet and aminoacylated A-site Phe-tRNAELECTRON MICROSCOPY2.72845
358G7P|1|AStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the cognate AUA codon (Structure I)ELECTRON MICROSCOPY2.92899
368G7Q|1|AStructure of the Escherichia coli 70S ribosome in complex with EF-Tu and Ile-tRNAIle(LAU) bound to the near-cognate AUG codon (Structure II)ELECTRON MICROSCOPY3.12899
379R3A|1|aStructure of Stalled Beta-Galactosidase 70S Ribosome Nascent ChainELECTRON MICROSCOPY2.862753
388ZFI|1|bStructure of E.coli ribosome in complex with an engineered arrest peptide and trigger factorELECTRON MICROSCOPY2.92903
399WNR|1|bStructure of E.coli ribosome in complex with an engineered arrest peptide and trigger factorELECTRON MICROSCOPY2.762903
409WNQ|1|bStructure of E.coli ribosome in complex with an engineered arrest peptideELECTRON MICROSCOPY2.592902
418ZEJ|1|bStructure of E.coli ribosome in complex with an engineered arrest peptideELECTRON MICROSCOPY2.692902
428FZF|1|ACryo-EM structure of an E. coli rotated ribosome complex bound with RF3-ppGpp and p/E-tRNAPhe (Composite state I-C)ELECTRON MICROSCOPY3.22899
438FZI|1|ACryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-B)ELECTRON MICROSCOPY3.12899
448FZJ|1|ACryo-EM structure of an E. coli rotated ribosome bound with RF3-GDPCP and p/E-tRNAPhe (Composite state II-C)ELECTRON MICROSCOPY32899
453JBV|1|bMechanisms of Ribosome Stalling by SecM at Multiple Elongation StepsELECTRON MICROSCOPY3.322903
466VWL|1|270S ribosome bound to HIV frameshifting stem-loop (FSS) and P/E tRNA (rotated conformation)ELECTRON MICROSCOPY3.12833
478W2N|1|1E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)ELECTRON MICROSCOPY3.22815
486ENF|1|ACryo-EM structure of a polyproline-stalled ribosome in the absence of EF-PELECTRON MICROSCOPY3.22807
498VWQ|1|1E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)ELECTRON MICROSCOPY3.12869
506ENU|1|APolyproline-stalled ribosome in the presence of elongation-factor P (EF-P)ELECTRON MICROSCOPY3.12871
518VV4|1|1E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codonELECTRON MICROSCOPY3.42821
524WOI|1|BA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
534V9C|1|DAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
544V9D|1|CAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32897
554U1U|1|BACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
564U20|1|BACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
574U1V|1|BACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
584U25|1|BACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
594U27|1|BACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
604WF1|1|BACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
614U26|1|BACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
624U24|1|BACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
637SSO|1|1Pre translocation 70S ribosome with A/A and P/E tRNA (Structure II-A)ELECTRON MICROSCOPY3.22903
647SSN|1|1Pre translocation 70S ribosome with A/P* and P/E tRNA (Structure II-B)ELECTRON MICROSCOPY3.22903
657ST7|1|1Pre translocation intermediate stalled with viomycin and bound with EF-G in a GDP and Pi state (Structure III-vio)ELECTRON MICROSCOPY3.22903
667N2V|1|23Elongating 70S ribosome complex in a spectinomycin-stalled intermediate state of translocation bound to EF-G in an active, GTP conformation (INT1)ELECTRON MICROSCOPY2.542904
677N2U|1|23Elongating 70S ribosome complex in a hybrid-H1 pre-translocation (PRE-H1) conformationELECTRON MICROSCOPY2.532902
688R8M|1|a70S Escherichia coli ribosome with Paenilamicin B2 bound with hybrid A/P- and hybrid P/E-tRNA.ELECTRON MICROSCOPY2.42738
697N30|1|23Elongating 70S ribosome complex in a hybrid-H2* pre-translocation (PRE-H2*) conformationELECTRON MICROSCOPY2.662901
708UXB|1|1E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codonELECTRON MICROSCOPY2.92900
716WDG|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-B)ELECTRON MICROSCOPY3.32903
726WDF|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure VI-A)ELECTRON MICROSCOPY3.32903
736WD1|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-B)ELECTRON MICROSCOPY3.32903
747LV0|1|1Pre-translocation rotated ribosome +1-frameshifting(CCC-A) complex (Structure Irot-FS)ELECTRON MICROSCOPY3.22903
759RTU|1|AStructure of the 70S-EF-G(P610L)-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G(P610L)-GDP-Pi)ELECTRON MICROSCOPY32903
767PJV|1|AStructure of the 70S-EF-G-GDP-Pi ribosome complex with tRNAs in hybrid state 1 (H1-EF-G-GDP-Pi)ELECTRON MICROSCOPY3.12903
777PJY|1|AStructure of the 70S-EF-G-GDP ribosome complex with tRNAs in chimeric state 1 (CHI1-EF-G-GDP)ELECTRON MICROSCOPY3.12903
786YST|1|AStructure of the P+9 ArfB-ribosome complex with P/E hybrid tRNA in the post-hydrolysis stateELECTRON MICROSCOPY3.22903
797UG7|1|2370S ribosome complex in an intermediate state of translocation bound to EF-G(GDP) stalled by Argyrin BELECTRON MICROSCOPY2.582903
807OTC|1|ACryo-EM structure of an Escherichia coli 70S ribosome in complex with elongation factor G and the antibiotic Argyrin BELECTRON MICROSCOPY2.92903
817N2C|1|23Elongating 70S ribosome complex in a fusidic acid-stalled intermediate state of translocation bound to EF-G(GDP) (INT2)ELECTRON MICROSCOPY2.722903
827SSD|1|1Mid translocation intermediate with EF-G bound with GDP (Structure IV)ELECTRON MICROSCOPY3.32903
838UZ3|1|1E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codonELECTRON MICROSCOPY3.22903
848VUP|1|1E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codonELECTRON MICROSCOPY3.42903
856OG7|1|170S termination complex with RF2 bound to the UGA codon. Non-rotated ribosome with RF2 bound (Structure II)ELECTRON MICROSCOPY3.32903
866OFX|1|1Non-rotated ribosome (Structure I)ELECTRON MICROSCOPY3.32903
876OGI|1|170S termination complex with RF2 bound to the UAG codon. Rotated ribosome conformation (Structure V)ELECTRON MICROSCOPY3.42903
887ZOD|1|b70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobiaELECTRON MICROSCOPY2.562901
897BL5|1|Apre-50S-ObgE particleELECTRON MICROSCOPY3.32913
908AP4|1|aStructure of Escherischia coli heat shock protein Hsp15 in complex with ribosomal 50S subunits bearing peptidyl-tRNAELECTRON MICROSCOPY32750
916XZ7|1|AE. coli 50S ribosomal subunit in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet).ELECTRON MICROSCOPY2.12897
926XZB|1|A2E. coli 70S ribosome in complex with dirithromycin, fMet-Phe-tRNA(Phe) and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.542897
936XZA|1|A2E. coli 70S ribosome in complex with dirithromycin, and deacylated tRNA(iMet) (focused classification).ELECTRON MICROSCOPY2.662897
946I7V|1|DARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92897
954YBB|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12897
965J91|1|DAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962897
975J5B|1|DAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82897
985JC9|1|DAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032897
995J7L|1|DAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32897
1005J8A|1|DAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12897
1015IT8|1|DAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122897
1025J88|1|DAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322897
1034V7V|1|BACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292854
1044V7S|1|BACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252854
1054WWW|1|RACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12854
1064V6C|1|BACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192854
1074V7T|1|BACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192854
1084V7U|1|BACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12854
1094V7U|1|DACrystal structure of the E. coli ribosome bound to erythromycin.X-RAY DIFFRACTION3.12841
1104V6C|1|DACrystal structure of the E. coli 70S ribosome in an intermediate state of ratchetingX-RAY DIFFRACTION3.192841
1114V7T|1|DACrystal structure of the E. coli ribosome bound to chloramphenicol.X-RAY DIFFRACTION3.192841
1124V7V|1|DACrystal structure of the E. coli ribosome bound to clindamycin.X-RAY DIFFRACTION3.292841
1134V7S|1|DACrystal structure of the E. coli ribosome bound to telithromycin.X-RAY DIFFRACTION3.252841
1144WWW|1|YACrystal structure of the E. coli ribosome bound to CEM-101X-RAY DIFFRACTION3.12841
1154WOI|1|CA4,5-linked aminoglycoside antibiotics regulate the bacterial ribosome by targeting dynamic conformational processes within intersubunit bridge B2X-RAY DIFFRACTION32897
1164V9C|1|BAAllosteric control of the ribosome by small-molecule antibioticsX-RAY DIFFRACTION3.32897
1174V9D|1|DAStructures of the bacterial ribosome in classical and hybrid states of tRNA bindingX-RAY DIFFRACTION32896
1186I7V|1|CARibosomal protein paralogs bL31 and bL36X-RAY DIFFRACTION2.92898
1194U24|1|DACrystal structure of the E. coli ribosome bound to dalfopristin.X-RAY DIFFRACTION2.92897
1204U26|1|DACrystal structure of the E. coli ribosome bound to dalfopristin and quinupristin.X-RAY DIFFRACTION2.82897
1214U25|1|DACrystal structure of the E. coli ribosome bound to virginiamycin M1.X-RAY DIFFRACTION2.92897
1224U27|1|DACrystal structure of the E. coli ribosome bound to flopristin and linopristin.X-RAY DIFFRACTION2.82897
1234U1V|1|DACrystal structure of the E. coli ribosome bound to linopristin.X-RAY DIFFRACTION32897
1244U20|1|DACrystal structure of the E. coli ribosome bound to flopristin.X-RAY DIFFRACTION2.92897
1254U1U|1|DACrystal structure of the E. coli ribosome bound to quinupristin.X-RAY DIFFRACTION2.952897
1264WF1|1|DACrystal structure of the E. coli ribosome bound to negamycin.X-RAY DIFFRACTION3.092897
1274YBB|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION2.12898
1285J91|1|CAStructure of the Wild-type 70S E coli ribosome bound to TigecyclineX-RAY DIFFRACTION2.962898
1295J5B|1|CAStructure of the WT E coli ribosome bound to tetracyclineX-RAY DIFFRACTION2.82898
1305J8A|1|CAStructure of the E coli 70S ribosome with the U1052G mutation in 16S rRNA bound to tigecyclineX-RAY DIFFRACTION3.12898
1315J7L|1|CAStructure of the 70S E coli ribosome with the U1052G mutation in the 16S rRNA bound to tetracyclineX-RAY DIFFRACTION32898
1325JC9|1|CAStructure of the Escherichia coli ribosome with the U1052G mutation in the 16S rRNAX-RAY DIFFRACTION3.032898
1335IT8|1|CAHigh-resolution structure of the Escherichia coli ribosomeX-RAY DIFFRACTION3.122898
1345J88|1|CAStructure of the E coli 70S ribosome with the U1060A mutation in 16S rRNAX-RAY DIFFRACTION3.322898
1356U48|1|CAE. coli 50S with phazolicin (PHZ) bound in exit tunnelELECTRON MICROSCOPY2.872898
1367YLA|1|ICryo-EM structure of 50S-HflX complexELECTRON MICROSCOPY2.522876
1376PJ6|1|IHigh resolution cryo-EM structure of E.coli 50SELECTRON MICROSCOPY2.22898
1387LVK|1|ICfr-modified 50S subunit from Escherichia coliELECTRON MICROSCOPY2.22898
1398B7Y|1|ICryo-EM structure of the E.coli 70S ribosome in complex with the antibiotic Myxovalargin B.ELECTRON MICROSCOPY32898
1408E3O|1|IE. coli 50S ribosome bound to solithromycin and VM1ELECTRON MICROSCOPY1.992897
1416PC7|1|IE. coli 50S ribosome bound to compound 46ELECTRON MICROSCOPY2.52897
1426PCR|1|IE. coli 50S ribosome bound to compound 40oELECTRON MICROSCOPY2.52897
1436PC5|1|IE. coli 50S ribosome bound to compounds 46 and VS1ELECTRON MICROSCOPY2.72897
1446PC6|1|IE. coli 50S ribosome bound to compound 47ELECTRON MICROSCOPY2.52897
1456PCS|1|IE. coli 50S ribosome bound to compound 40eELECTRON MICROSCOPY2.82897
1466PCQ|1|IE. coli 50S ribosome bound to VM2ELECTRON MICROSCOPY2.62897
1476PCT|1|IE. coli 50S ribosome bound to compound 41qELECTRON MICROSCOPY2.82897
1486PC8|1|IE. coli 50S ribosome bound to compound 40qELECTRON MICROSCOPY2.92897
1496PCH|1|IE. coli 50S ribosome bound to compound 21ELECTRON MICROSCOPY2.92897
1508E43|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3336ELECTRON MICROSCOPY2.092897
1518E41|1|IE. coli 50S ribosome bound to tiamulin and VS1ELECTRON MICROSCOPY2.132898
1528E3M|1|IE. coli 50S ribosome bound to L-linker solithromycin conjugateELECTRON MICROSCOPY2.252898
1538E30|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3142ELECTRON MICROSCOPY1.912898
1548E33|1|IE. coli 50S ribosome bound to compound streptogramin analog SAB001ELECTRON MICROSCOPY2.232897
1558E36|1|IE. coli 50S ribosome bound to compound streptogramin A analog 3146ELECTRON MICROSCOPY2.382897
1568E44|1|IE. coli 50S ribosome bound to antibiotic analog SLC09ELECTRON MICROSCOPY2.532898
1578E42|1|IE. coli 50S ribosome bound to tiamulin and azithromycinELECTRON MICROSCOPY2.292898
1588E49|1|IE. coli 50S ribosome bound to antibiotic analog SLC31ELECTRON MICROSCOPY2.052898
1596WYV|1|IE. coli 50S ribosome bound to compounds 47 and VS1ELECTRON MICROSCOPY2.752897
1604V50|1|DBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
1614V57|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
1624V4Q|1|DBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
1634V4H|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
1644V54|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
1654V52|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
1664V64|1|DBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
1678T5H|1|BCryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiationELECTRON MICROSCOPY3.32903
1688T5D|1|BCryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiationELECTRON MICROSCOPY3.22903
1698G2U|1|BTime-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900msELECTRON MICROSCOPY32903
1708G34|1|BTime-resolved cryo-EM study of the 70S recycling by the HflX:1st intermediateELECTRON MICROSCOPY3.22903
1718G38|1|BTime-resolved cryo-EM study of the 70S recycling by the HflX:3rd IntermediateELECTRON MICROSCOPY3.22903
1728G31|1|BTime-resolved cryo-EM study of the 70S recycling by the HflX:2nd IntermediateELECTRON MICROSCOPY3.22903
1739HA6|1|Amature 50S subunit supplemented with Api137ELECTRON MICROSCOPY3.082900
1749H3Z|1|Amature 50S subunitELECTRON MICROSCOPY2.982900
1758RPY|1|AEscherichia coli 50S subunit in complex with the antimicrobial peptide Api137ELECTRON MICROSCOPY2.642900
1768RPZ|1|AEscherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation IELECTRON MICROSCOPY2.442900
1778RQ2|1|AEscherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation IIIELECTRON MICROSCOPY2.442900
1788RQ0|1|AEscherichia coli 50S subunit in complex with the antimicrobial peptide Api88 - conformation IIELECTRON MICROSCOPY2.442900
1799SS4|1|D2pre-50S ribosomal subunit in rimM-KO with RsfS (-H68)ELECTRON MICROSCOPY2.72808
1809SS5|1|D250S ribosomal subunit in rimM-KO with RsfS (+H68)ELECTRON MICROSCOPY2.72903
1819SS6|1|D270S ribosome from RimM-KOELECTRON MICROSCOPY2.62903
1829NJF|1|R1E. coli pre-elongation complex without an A-site tRNA with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformationELECTRON MICROSCOPY3.42903
1839NLF|1|R1E. coli initiation complex with EQ2-YbiT in Hydrolytic 2/PtIM(a) conformationELECTRON MICROSCOPY3.22903
1849NLQ|1|R1E. coli initiation complex with EQ2-YbiT in Hydrolytic 1/PtIM(a) conformationELECTRON MICROSCOPY3.32903
1859NLS|1|R1E. coli initiation complex with EQ2-YbiT in Intermediate/PtIM(b) conformationELECTRON MICROSCOPY3.32903
1869NL7|1|R1E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 2/PtIM(b) conformationELECTRON MICROSCOPY3.32903
1879NL6|1|R1E. coli initiation complex with EQ2-YbiT in Non-hydrolytic 1/PtIM(a) conformationELECTRON MICROSCOPY3.22903
1889NLH|1|R1E.coli Initiation complex with YheS-EQ2ELECTRON MICROSCOPY3.12903
1897QQ3|1|ICryo-EM structure of the E.coli 50S ribosomal subunit in complex with the antibiotic Myxovalargin A.ELECTRON MICROSCOPY2.12898
1909NKL|1|R1E. coli 70S initiation complexELECTRON MICROSCOPY3.32903
1919NJV|1|R1E. coli 70S initiation complex (bL33 absent)ELECTRON MICROSCOPY3.12903
1929NLE|1|R1E. coli initiation complex with EQ2-EttA in Hydrolytic 1 conformationELECTRON MICROSCOPY3.22903
1939NLB|1|R1E. coli initiation complex with EQ2-EttA in Hydrolytic 2 conformationELECTRON MICROSCOPY3.22903
1949NLJ|1|R1E.coli Initiation complex with Uup-EQ2ELECTRON MICROSCOPY3.12903
1959NL5|1|R1E. coli pre-elongation complex without an A-site tRNA with EQ2-EttA in Hydrolytic 1 conformationELECTRON MICROSCOPY32903
1967ABZ|1|1Structure of pre-accomodated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.212904
1976LKQ|1|tThe Structural Basis for Inhibition of Ribosomal Translocation by ViomycinX-RAY DIFFRACTION3.12850
1984V85|1|BACrystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.X-RAY DIFFRACTION3.22853
1994V9P|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2006I0Y|1|ATnaC-stalled ribosome complex with the titin I27 domain folding close to the ribosomal exit tunnelELECTRON MICROSCOPY3.22854
2014V9O|1|AAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2024V9O|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2034V9P|1|CAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2044V9P|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2054V9O|1|EAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2064V9O|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2074V9P|1|GAControl of ribosomal subunit rotation by elongation factor GX-RAY DIFFRACTION2.92854
2088W51|1|AStructure of YchF(H114A) on E.coli 50S ribosomal subunitELECTRON MICROSCOPY2.42904
2098J1Z|1|aThe global structure of pre50S related to DbpA in state3ELECTRON MICROSCOPY2.62513
2107PJS|1|AStructure of the 70S ribosome with tRNAs in the classical pre-translocation state and apramycin (C)ELECTRON MICROSCOPY2.352903
2116YSS|1|AStructure of the P+9 ArfB-ribosome complex in the post-hydrolysis stateELECTRON MICROSCOPY2.62903
2126YSR|1|AStructure of the P+9 stalled ribosome complexELECTRON MICROSCOPY3.12903
2134V50|1|BBCrystal Structure of Ribosome with messenger RNA and the Anticodon stem-loop of P-site tRNA.X-RAY DIFFRACTION3.222841
2144V4Q|1|BBCrystal structure of the bacterial ribosome from Escherichia coli at 3.5 A resolution.X-RAY DIFFRACTION3.462841
2154V4H|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with the antibiotic kasugamyin at 3.5A resolution.X-RAY DIFFRACTION3.462841
2164V64|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with hygromycin B.X-RAY DIFFRACTION3.52841
2174V52|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with neomycin.X-RAY DIFFRACTION3.212841
2184V57|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with spectinomycin and neomycin.X-RAY DIFFRACTION3.52841
2194V54|1|BBCrystal structure of the bacterial ribosome from Escherichia coli in complex with ribosome recycling factor (RRF).X-RAY DIFFRACTION3.32841
2206ORL|1|1RF1 pre-accommodated 70S complex at 24 msELECTRON MICROSCOPY3.52903
2213JCE|1|AStructure of Escherichia coli EF4 in pretranslocational ribosomes (Pre EF4)ELECTRON MICROSCOPY3.22903
2229MKK|1|aStructure of arbekacin bound Escherichia coli 70S ribosomeELECTRON MICROSCOPY3.22732
2238Q4F|1|aStructure of arbekacin bound Escherichia coli 70S ribosomeELECTRON MICROSCOPY3.12732
2248FZG|1|ACryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF3-GDPCP, RF1, P- and E-site tRNAPhe (Composite state II-A)ELECTRON MICROSCOPY3.12899
2258FZD|1|ACryo-EM structure of an E. coli non-rotated ribosome termination complex bound with apoRF3, RF1, P- and E-site tRNAPhe (Composite state I-B)ELECTRON MICROSCOPY3.12899
2268FZE|1|ACryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State I-A)ELECTRON MICROSCOPY32899
2278FZH|1|ACryo-EM structure of an E. coli non-rotated ribosome termination complex bound with RF1, P- and E-site tRNAPhe (State II-D)ELECTRON MICROSCOPY2.92899
2288G7S|1|AStructure of the Escherichia coli 70S ribosome in complex with P-site tRNAIle(LAU) bound to the cognate AUA codon (Structure IV)ELECTRON MICROSCOPY3.12899
2297D6Z|1|AMolecular model of the cryo-EM structure of 70S ribosome in complex with peptide deformylase and trigger factorELECTRON MICROSCOPY3.42903
2309B51|1|BAE. coli 70S ribosome complex (N1-methylated 16S A1408 + G418)ELECTRON MICROSCOPY2.42897
2319B4Z|1|BAE. coli 70S ribosome complex (N1-methylated 16S A1408 + arbekacin)ELECTRON MICROSCOPY2.22897
2329B50|1|BAE. coli 70S ribosome complex (unmethylated 16S A1408 + arbekacin)ELECTRON MICROSCOPY2.72897
2335H5U|1|AMechanistic insights into the alternative translation termination by ArfA and RF2ELECTRON MICROSCOPY3.012897
2347O19|1|BACryo-EM structure of an Escherichia coli TnaC-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.92897
2357O1A|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.42897
2366TC3|1|23S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 1)ELECTRON MICROSCOPY2.72897
2376TBV|1|23S1Cryo-EM structure of an Escherichia coli ribosome-SpeFL complex stalled in response to L-ornithine (Replicate 2)ELECTRON MICROSCOPY2.72897
2387B5K|1|AE. coli 70S containing suppressor tRNA in the A-site stabilized by a Negamycin analogue and P-site tRNA-nascent chain.ELECTRON MICROSCOPY2.92897
2397Q4K|1|BAErythromycin-stalled Escherichia coli 70S ribosome with streptococcal MsrDL nascent chainELECTRON MICROSCOPY32897
2407ZTA|1|23S1Structure of an Escherichia coli 70S ribosome stalled by Tetracenomycin X during translation of an MAAAPQK(C) peptideELECTRON MICROSCOPY2.72903
2417N31|1|23Elongating 70S ribosome complex in a post-translocation (POST) conformationELECTRON MICROSCOPY2.692904
2428RCL|1|72Escherichia coli paused disome complex (Non-rotated disome interface class 1)ELECTRON MICROSCOPY3.492904
2438R3V|1|72Escherichia coli paused disome complex (non-rotated disome interface)ELECTRON MICROSCOPY3.282904
2448PKL|1|7Escherichia coli paused disome complex (leading 70S non-rotated closed PRE state)ELECTRON MICROSCOPY3.092904
2458PEG|1|7Escherichia coli paused disome complex (queueing 70S non-rotated closed PRE state)ELECTRON MICROSCOPY3.32903
2468UTJ|1|1E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frameELECTRON MICROSCOPY3.52903
2478URM|1|1E. coli 70S ribosome with unmodified tRNAPro(GGG) bound to slippery P-site CCC-C codon and tRNAVal(UAC) in the A siteELECTRON MICROSCOPY32903
2486OM6|1|1Structure of trans-translation inhibitor bound to E. coli 70S ribosome with P site tRNAELECTRON MICROSCOPY3.12903
2496OSQ|1|1RF1 accommodated state bound Release complex 70S at long incubation time pointELECTRON MICROSCOPY3.52903
2506ORE|1|1Release complex 70SELECTRON MICROSCOPY2.92903
2518UQL|1|aEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH in loaded state, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.22880
2528UR0|1|aEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 24 nt long spacer, and fMet-tRNAs in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.42880
2538URY|1|aEscherichia coli transcription-translation coupled complex class B (TTC-B) containing RfaH bound to ops signal, NusA, mRNA with a 30 nt long spacer, and fMet-tRNA in E-site and P-site of the ribosomeELECTRON MICROSCOPY3.12880
2548VOO|1|aEscherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, ops signal, RfaH, NusA, and fMet-tRNAs in E-site and P-siteELECTRON MICROSCOPY3.42880
2556X6T|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B1 (TTC-B1) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.22880
2566X7F|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B2 (TTC-B2) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.52880
2576X7K|1|aCryo-EM structure of an Escherichia coli coupled transcription-translation complex B3 (TTC-B3) containing an mRNA with a 24 nt long spacer, transcription factors NusA and NusG, and fMet-tRNAs at P-site and E-siteELECTRON MICROSCOPY3.12880
2585MDZ|1|1Structure of the 70S ribosome (empty A site)ELECTRON MICROSCOPY3.12903
2595MDW|1|1Structure of ArfA(A18T) and RF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.062903
2605MDV|1|1Structure of ArfA and RF2 bound to the 70S ribosome (accommodated state)ELECTRON MICROSCOPY2.972903
2616C4I|1|AConformation of methylated GGQ in the peptidyl transferase center during translation terminationELECTRON MICROSCOPY3.242904
2627M5D|1|1Cryo-EM structure of a non-rotated E.coli 70S ribosome in complex with RF3-GTP, RF1 and P-tRNA (state I)ELECTRON MICROSCOPY2.82903
2638QBT|1|AE. coli ApdP-stalled ribosomal complexELECTRON MICROSCOPY2.22841
2645NWY|1|N2.9 A cryo-EM structure of VemP-stalled ribosome-nascent chain complexELECTRON MICROSCOPY2.92897
2656SZS|1|ARelease factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilisELECTRON MICROSCOPY3.062903
2667NSO|1|AStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with P-tRNAELECTRON MICROSCOPY2.92903
2677AC7|1|1Structure of accomodated trans-translation complex on E. Coli stalled ribosome.ELECTRON MICROSCOPY3.082903
2688A3L|1|aStructural insights into the binding of bS1 to the ribosomeELECTRON MICROSCOPY3.422903
2697NBU|1|aStructure of the HigB1 toxin mutant K95A from Mycobacterium tuberculosis (Rv1955) and its target, the cspA mRNA, on the E. coli Ribosome.ELECTRON MICROSCOPY3.112900
2705WFS|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C4)ELECTRON MICROSCOPY32900
2715WDT|1|A70S ribosome-EF-Tu H84A complex with GppNHpELECTRON MICROSCOPY32900
2725WE4|1|A70S ribosome-EF-Tu wt complex with GppNHpELECTRON MICROSCOPY3.12900
2735WFK|1|A70S ribosome-EF-Tu H84A complex with GTP and near-cognate tRNA (Complex C3)ELECTRON MICROSCOPY3.42900
2745WE6|1|A70S ribosome-EF-Tu H84A complex with GTP and cognate tRNAELECTRON MICROSCOPY3.42900
2757CPJ|1|AycbZ-stalled 70S ribosomeELECTRON MICROSCOPY3.32900
2765O2R|1|ACryo-EM structure of the proline-rich antimicrobial peptide Api137 bound to the terminating ribosomeELECTRON MICROSCOPY3.42900
2775AFI|1|A2.9A Structure of E. coli ribosome-EF-TU complex by cs-corrected cryo-EMELECTRON MICROSCOPY2.92900
2785UYM|1|0170S ribosome bound with cognate ternary complex base-paired to A site codon, closed 30S (Structure III)ELECTRON MICROSCOPY3.22903
2795MGP|1|AStructural basis for ArfA-RF2 mediated translation termination on stop-codon lacking mRNAsELECTRON MICROSCOPY3.12900
2806H4N|1|AStructure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 - 70S Hibernating E. coli RibosomeELECTRON MICROSCOPY32900
2816Y69|1|ACryo-EM structure of an Escherichia coli 70S ribosome in complex with antibiotic TetracenomycinXELECTRON MICROSCOPY2.862887
2827K51|1|1Mid-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure II)ELECTRON MICROSCOPY3.52903
2837K54|1|1Mid-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure II-FS)ELECTRON MICROSCOPY3.22903
2847K52|1|1Near post-translocated non-frameshifting(CCA-A) complex with EF-G and GDPCP (Structure III)ELECTRON MICROSCOPY3.42903
2857K55|1|1Near post-translocated +1-frameshifting(CCC-A) complex with EF-G and GDPCP (Structure III-FS)ELECTRON MICROSCOPY3.32903
2867K53|1|1Pre-translocation +1-frameshifting(CCC-A) complex (Structure I-FS)ELECTRON MICROSCOPY3.22903
2877K50|1|1Pre-translocation non-frameshifting(CCA-A) complex (Structure I)ELECTRON MICROSCOPY3.42903
2887ST6|1|1Pre translocation, non-rotated 70S ribosome (Structure I)ELECTRON MICROSCOPY32903
2897ST2|1|1Post translocation, non-rotated 70S ribosome with EF-G dissociated (Structure VII)ELECTRON MICROSCOPY2.92903
2906WD0|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure I-A)ELECTRON MICROSCOPY32903
2916WDE|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-B)ELECTRON MICROSCOPY32903
2926WDD|1|1Cryo-EM of elongating ribosome with EF-Tu*GTP elucidates tRNA proofreading (Cognate Structure V-A)ELECTRON MICROSCOPY3.22903
2936BU8|1|0170S ribosome with S1 domains 1 and 2 (Class 1)ELECTRON MICROSCOPY3.52903
2945U9G|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure I)ELECTRON MICROSCOPY3.22903
2955U9F|1|013.2 A cryo-EM ArfA-RF2 ribosome rescue complex (Structure II)ELECTRON MICROSCOPY3.22903
2967JT2|1|170S ribosome stalled on long mRNA with ArfB bound in the A siteELECTRON MICROSCOPY3.52903
2977JT1|1|170S ribosome stalled on long mRNA with ArfB-1 and ArfB-2 bound (+9-III)ELECTRON MICROSCOPY3.32903
2985LZD|1|AStructure of SelB-Sec-tRNASec bound to the 70S ribosome in the GTPase activated state (GA)ELECTRON MICROSCOPY3.42903
2995LZE|1|AStructure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)ELECTRON MICROSCOPY3.52900
3006WNW|1|4Active 70S ribosome without free 5S rRNA and bound with A- and P- tRNAELECTRON MICROSCOPY3.23031
3018SYL|1|ACryo-EM structure of the Escherichia coli 70S ribosome in complex with amikacin, mRNA, and A-, P-, and E-site tRNAsELECTRON MICROSCOPY2.92845
3028CGD|1|aClindamycin bound to the 50S subunitELECTRON MICROSCOPY1.982748
3038CAM|1|aEvernimicin bound to the 50S subunitELECTRON MICROSCOPY1.862690
3046ZTM|1|BAE. coli 70S-RNAP expressome complex in collided state without NusGELECTRON MICROSCOPY3.32901
3059D89|1|DE. coli 50S ribosomal subunit in complex with PrAMP rumicidin-2 (focused refinement)ELECTRON MICROSCOPY1.952728
3066ZTP|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 6ELECTRON MICROSCOPY32900
3076ZTO|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 1ELECTRON MICROSCOPY32900
3086ZU1|1|BAE. coli 70S-RNAP expressome complex in uncoupled state 2ELECTRON MICROSCOPY32900
3096ZTL|1|BAE. coli 70S-RNAP expressome complex in collided state bound to NusGELECTRON MICROSCOPY3.52899
3106ZTJ|1|BAE. coli 70S-RNAP expressome complex in NusG-coupled state (38 nt intervening mRNA)ELECTRON MICROSCOPY3.42900
3119GHC|1|aPre-release fusidic acid-locked Escherichia coli 70S ribosome with Staphylococus aureus EF-G and FusB (FusB-EF-G-70S)ELECTRON MICROSCOPY2.792782
3129GHD|1|aEscherichia coli 70S ribosome in complex with Staphylococcus aureus FusB-EF-G (FusB-EF-G-70S*)ELECTRON MICROSCOPY2.412782
3139GHF|1|aStaphylococcus aureus FusB bound to the large subunit of the Escherichia coli 70S ribosome (FusB-70S:LSU)ELECTRON MICROSCOPY2.42782
3148CGK|1|aLincomycin and Avilamycin bound to the 50S subunitELECTRON MICROSCOPY1.642699
3159GHE|1|aStaphylococcus aureus FusB bound to the small subunit of the Escherichia coli 70S ribosome (FusB-70S:SSU)ELECTRON MICROSCOPY1.872782
3169GHB|1|aFusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G in post-translocational state (POST)ELECTRON MICROSCOPY2.212782
3179GHA|1|aFusidic acid-locked Escherichia coli 70S ribosome with Staphylococcus aureus EF-G and a tRNA in pe/E chimeric state (CHI)ELECTRON MICROSCOPY2.242782
3186S0K|1|ARibosome nascent chain in complex with SecAELECTRON MICROSCOPY3.12883
3196QUL|1|AStructure of a bacterial 50S ribosomal subunit in complex with the novel quinoxolidinone antibiotic cadazolidELECTRON MICROSCOPY32795
3205MDY|1|1Structure of ArfA and TtRF2 bound to the 70S ribosome (pre-accommodated state)ELECTRON MICROSCOPY3.352903
3217O1C|1|BACryo-EM structure of an Escherichia coli TnaC(R23F)-ribosome-RF2 complex stalled in response to L-tryptophanELECTRON MICROSCOPY2.62897
3229IOT|1|ACryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutantELECTRON MICROSCOPY2.72841
3238ZTU|1|a70S ribosome arrested by PepNLELECTRON MICROSCOPY2.92753
3248ZTV|1|a70S ribosome arrested by PepNL with RF2ELECTRON MICROSCOPY2.92753
3257OT5|1|1CspA-70 cotranslational folding intermediate 1ELECTRON MICROSCOPY2.92903
3267OII|1|1CspA-70 cotranslational folding intermediate 2ELECTRON MICROSCOPY32903
3277OIG|1|1CspA-27 cotranslational folding intermediate 3ELECTRON MICROSCOPY3.22903
3287OIF|1|1CspA-27 cotranslational folding intermediate 2ELECTRON MICROSCOPY32903
3297NWW|1|1CspA-27 cotranslational folding intermediate 1ELECTRON MICROSCOPY3.052903
3309N2C|1|23Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsH ribosome (HBB-70S)ELECTRON MICROSCOPY2.42768
3318ZFG|1|aStructure of the Bacterial Ribosome with hypoxia-induced rRNA modificationsELECTRON MICROSCOPY2.682761
3328ZFF|1|aStructure of the Bacterial Ribosome without hypoxia-induced rRNA modificationsELECTRON MICROSCOPY2.592761
3338B0X|1|aTranslating 70S ribosome in the unrotated state (P and E, tRNAs)ELECTRON MICROSCOPY1.552748
3349Q87|1|aPrinciples of ion binding to RNA inferred from the analysis of a 1.55 Angstrom resolution bacterial ribosome structure - Part I: Mg2+ELECTRON MICROSCOPY1.552906
3359GR1|1|aE. coli 70S-TEC complex in delivery stateELECTRON MICROSCOPY3.172748
3367NWT|1|1Initiated 70S ribosome in complex with 2A protein from encephalomyocarditis virus (EMCV)ELECTRON MICROSCOPY2.662903
3379GXX|1|a70S ribosome with doublet-decoding tRNASer3 bound to A-site GCA codonELECTRON MICROSCOPY2.612753
3389H0L|1|a70S ribosome with cognate tRNASer3 bound to A-site AGC codonELECTRON MICROSCOPY2.492753
3397Y7H|1|aStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAC)ELECTRON MICROSCOPY2.512753
3407Y7G|1|aStructure of the Bacterial Ribosome with human tRNA Tyr(GalQ34) and mRNA(UAU)ELECTRON MICROSCOPY2.342753
3417Y7C|1|aStructure of the Bacterial Ribosome with human tRNA Asp(G34) and mRNA(GAU)ELECTRON MICROSCOPY2.512753
3427Y7E|1|aStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAU)ELECTRON MICROSCOPY2.412753
3437Y7F|1|aStructure of the Bacterial Ribosome with human tRNA Asp(ManQ34) and mRNA(GAC)ELECTRON MICROSCOPY2.432753
3447Y7D|1|aStructure of the Bacterial Ribosome with human tRNA Asp(Q34) and mRNA(GAU)ELECTRON MICROSCOPY2.582753
3458HU1|1|aE. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and ct6A37 in classical stateELECTRON MICROSCOPY2.692753
3468HSP|1|aE. coli 70S ribosome complexed with tRNA_Ile2 bearing L34 and t6A37 in classical stateELECTRON MICROSCOPY2.322753
3478HTZ|1|aE. coli 70S ribosome complexed with H. marismortui tRNA_Ile2 bearing agm2C34 in classical stateELECTRON MICROSCOPY2.42753
3488YUO|1|aE. coli 70S ribosome complexed with P. putida tRNAIle2 at the A-site and P-siteELECTRON MICROSCOPY2.252753
3498YUS|1|aE. coli 70S ribosome complexed with P.putida tRNAIle2 and A(F)4 mRNAELECTRON MICROSCOPY2.432753
3508YUR|1|aE. coli 70S ribosome complexed with P. putida tRNAIle2 and Am4 mRNAELECTRON MICROSCOPY2.472753
3518YUQ|1|aE. coli 70S ribosome complexed with P. putida tRNAIle2 and dA4 mRNAELECTRON MICROSCOPY2.412753
3528YUP|1|aE. coli 70S ribosome complexed with P. putida tRNAIle2 and A4 mRNAELECTRON MICROSCOPY2.392753
3538IFC|1|aArbekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.92753
3548IFB|1|aDibekacin-bound E.coli 70S ribosome in the PURE systemELECTRON MICROSCOPY2.432753
3557OJ0|1|aCryo-EM structure of 70S ribosome stalled with TnaC peptide and RF2ELECTRON MICROSCOPY3.52807
3567P3K|1|aCryo-EM structure of 70S ribosome stalled with TnaC peptide (control)ELECTRON MICROSCOPY2.92753
3577OIZ|1|aCryo-EM structure of 70S ribosome stalled with TnaC peptideELECTRON MICROSCOPY2.92753
3588EIU|1|aE. coli 70S ribosome with A-loop mutations U2554C and U2555CELECTRON MICROSCOPY2.242753
3597K00|1|aStructure of the Bacterial Ribosome at 2 Angstrom ResolutionELECTRON MICROSCOPY1.982753
3608G6W|1|aStructure of WT E.coli 70S ribosome complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site ortho-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.022753
3618G6Y|1|aStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site 3-aminopyridine-4-carboxylic acid charged NH-tRNAPheELECTRON MICROSCOPY2.092753
3628G6X|1|aStructure of WT E.coli ribosome 50S subunit with complexed with mRNA, P-site fMet-NH-tRNAfMet and A-site meta-aminobenzoic acid charged NH-tRNAPheELECTRON MICROSCOPY2.312753
3638EMM|1|aComposite 70S ribosome structure for "Atomistic simulations of the E. coli ribosome provide selection criteria for translationally active substratesELECTRON MICROSCOPY2.12753
3648QOA|1|aStructure of SecM-stalled Escherichia coli 70S ribosomeELECTRON MICROSCOPY22753
3658QK7|1|1E167K RF2 on E. coli 70S release complex with UAAELECTRON MICROSCOPY2.772899
3668P17|1|1E167K RF2 on E. coli 70S release complex with UGG (Structure II)ELECTRON MICROSCOPY2.782899
3678P16|1|1E167K RF2 on E. coli 70S release complex with UGG (Structure I)ELECTRON MICROSCOPY2.772899
3688P18|1|1E167K RF2 on E. coli 70S release complex with UGG (Structure III)ELECTRON MICROSCOPY2.772899
3698AYE|1|aE. coli 70S ribosome bound to thermorubin and fMet-tRNAELECTRON MICROSCOPY1.962753
3709CG5|1|a70S initiation complex (tRNA-fMet M1 + UUG start codon)ELECTRON MICROSCOPY2.592753
3719CG6|1|a70S initiation complex (tRNA-fMet M1 + GUG start codon)ELECTRON MICROSCOPY2.612753
3729CG7|1|a70S initiation complex (tRNA-fMet M1 + AUG start codon)ELECTRON MICROSCOPY2.752753
3739AX7|1|a70S initiation complex (tRNA-fMet M1 + CUG start codon)ELECTRON MICROSCOPY2.632753
3747TOS|1|23SE. coli 70S ribosomes bound with the ALS/FTD-associated dipeptide repeat protein PR20ELECTRON MICROSCOPY2.92903
3757NSP|1|AStructure of ErmDL-Erythromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.52903
3767NSQ|1|AStructure of ErmDL-Telithromycin-stalled 70S E. coli ribosomal complex with A and P-tRNAELECTRON MICROSCOPY3.12903
3778CGV|1|aTiamulin bound to the 50S subunitELECTRON MICROSCOPY1.662687
3788ANA|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the 50S ribosomal subunitELECTRON MICROSCOPY2.12733
3798AKN|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the terminating ribosomeELECTRON MICROSCOPY2.32753
3808AM9|1|aCryo-EM structure of the proline-rich antimicrobial peptide drosocin bound to the elongating ribosomeELECTRON MICROSCOPY2.82753
3818CEU|1|aRetapamulin and Capreomycin bound to the 50S subunitELECTRON MICROSCOPY1.832753
3829FBV|1|a70S Escherichia coli ribosome with P-site initiatior tRNA.ELECTRON MICROSCOPY2.42753
3838R6C|1|a70S Escherichia coli ribosome with Paenilamicin B2 bound with A- and P-site tRNA.ELECTRON MICROSCOPY2.22753
3847N1P|1|23Elongating 70S ribosome complex in a classical pre-translocation (PRE-C) conformationELECTRON MICROSCOPY2.332904
3859N2B|1|23Impacts of ribosomal RNA sequence variation on gene expression and phenotype: Cryo-EM structure of the rrsB ribosome (BBB-70S)ELECTRON MICROSCOPY2.22767
3868FTO|1|aE. coli 70S ribosome with an improved MS2 tag inserted in H98ELECTRON MICROSCOPY1.852767
3877S1J|1|IWild-type Escherichia coli ribosome with antibiotic radezolidELECTRON MICROSCOPY2.472898
3887S1I|1|IWild-type Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.482898
3897S1G|1|Iwild-type Escherichia coli stalled ribosome with antibiotic linezolidELECTRON MICROSCOPY2.482898
3907S1H|1|IWild-type Escherichia coli ribosome with antibiotic linezolidELECTRON MICROSCOPY2.352898
3917S1K|1|ICfr-modified Escherichia coli stalled ribosome with antibiotic radezolidELECTRON MICROSCOPY2.422898
3927QGN|1|NStructure of the SmrB-bound E. coli disome - stalled 70S ribosomeELECTRON MICROSCOPY3.372897
3939GFT|1|NStructure of the HrpA-bound E. coli disome, Class IELECTRON MICROSCOPY3.12897
3949GGR|1|NStructure of the HrpA-bound E. coli disome, Class IIELECTRON MICROSCOPY3.22897
3959GGR|1|AVStructure of the HrpA-bound E. coli disome, Class IIELECTRON MICROSCOPY3.22897
3969GFT|1|AVStructure of the HrpA-bound E. coli disome, Class IELECTRON MICROSCOPY3.12897
3979AX8|1|A70S initiation complex (tRNA-fMet M1, initiation factor 2 + CUG start codon)ELECTRON MICROSCOPY2.62854
3986VWM|1|270S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure I)ELECTRON MICROSCOPY3.42833
3996VWN|1|270S ribosome bound to HIV frameshifting stem-loop (FSS) and P-site tRNA (non-rotated conformation, Structure II)ELECTRON MICROSCOPY3.42833
4005GAE|1|ARNC in complex with a translocating SecYEGELECTRON MICROSCOPY3.332884
4016YS3|1|bCryo-EM structure of the 50S ribosomal subunit at 2.58 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.582888
4026QDW|1|bCryo-EM structure of the 50S ribosomal subunit at 2.83 Angstroms with modeled GBC SecM peptideELECTRON MICROSCOPY2.832888
4039I3L|1|bStructure of E.coli ribosome with filamin mutant Y719E nascent chain at linker length of 47 amino acids, with tRNAELECTRON MICROSCOPY3.12890
4047ZQ6|1|b70S E. coli ribosome with truncated uL23 and uL24 loops and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.752901
4057Z20|1|b70S E. coli ribosome with an extended uL23 loop from Candidatus marinimicrobia and a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.292901
4067ZQ5|1|b70S E. coli ribosome with truncated uL23 and uL24 loopsELECTRON MICROSCOPY2.72900
4079HYM|1|bStructure of WT E.coli ribosome with complexed filament nascent chain at length 34, with mRNA, P-site and A-site tRNAs, and mRNAELECTRON MICROSCOPY2.22901
4089HUS|1|bStructure of WT E.coli ribosome with complexed filament nascent chain at length 31, with P-site tRNAsELECTRON MICROSCOPY2.42901
4097ZP8|1|b70S E. coli ribosome with a stalled filamin domain 5 nascent chainELECTRON MICROSCOPY2.22901
4109HUQ|1|bStructure of WT E.coli ribosome with complexed filament nascent chain at length 47, with P-site tRNAELECTRON MICROSCOPY2.492901
4119HY6|1|bStructure of E.coli ribosome with nascent chain at linker length of 31 amino acids, with mRNA, P-site and A-site tRNAsELECTRON MICROSCOPY2.62901
4127ACR|1|1Structure of post-translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.442903
4137ACJ|1|1Structure of translocated trans-translation complex on E. coli stalled ribosome.ELECTRON MICROSCOPY3.22903
4149MOR|1|1Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.652903
4155U4I|1|AStructural Basis of Co-translational Quality Control by ArfA and RF2 Bound to RibosomeELECTRON MICROSCOPY3.52904
4165IQR|1|1Structure of RelA bound to the 70S ribosomeELECTRON MICROSCOPY32904
4179MQ4|1|1Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.782903
4187SA4|1|1Damaged 70S ribosome with PrfH boundELECTRON MICROSCOPY2.552903
4196C4H|1|AConformation of methylated GGQ in the peptidyl transferase center during translation termination (PTC region)ELECTRON MICROSCOPY3.1636
4208KIE|1|aStructure of YchF with 50S ribosomal subunit (local map)ELECTRON MICROSCOPY2.5361
4218CGU|1|aGentamicin bound to the 30S bodyELECTRON MICROSCOPY1.8931
4228CGJ|1|aStreptomycin bound to the 30S bodyELECTRON MICROSCOPY1.7931
4238CEP|1|aRound2 30S head (no antibiotic)ELECTRON MICROSCOPY2.0431
4248CGR|1|aApramycin bound to the 30S bodyELECTRON MICROSCOPY2.1230
4258R3V|1|71Escherichia coli paused disome complex (non-rotated disome interface)ELECTRON MICROSCOPY3.2830
4268RCL|1|71Escherichia coli paused disome complex (Non-rotated disome interface class 1)ELECTRON MICROSCOPY3.4930

Heat map of mutual geometric discrepancy, in Angstroms per nucleotide. The ordering in the heat map is the same as in the table. The colorbar ranges from 0 to the maximum observed discrepancy. Click above the diagonal to select a range of structures, below the diagonal to select two structures.


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